Silkworm Genome Informatics Database

Gene

KWMTBOMO11997

Annotation

hypothetical_protein_RR48_11259_[Papilio_machaon]

Location

Bomo_Chr20(+):4858279-4864573 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.506

CDS

ATGTACGACAACCACAACGCTATTAAAACTGAGAGAGTTACAACTTACAATTCTGTTTCCGGCGGAGCGGTTCCGGCGGAATTCTATTTGAGTCAAGAGTTCTATTGTGGGAAAAACGTGTACCTCTTTGTCTCGGAGTTGTACAGCGACATCTATAACATGGGTCGTGGTTTTGCGCCGTATTGCAAGAGTCGCGCCTTCCACTTTCTCGGCTTCATTCATTTCATGGACGACAAGCATTATTACCTCGAGGAAGACCCTACAGTCGTGTTTCAGATGGACAATTACATACACGGACTAGAGTGCCATCTCGGCATATGTATTTTCAGGTTTCCGTTCAAGAAAGGCCTTCAACACGTCCGTGATATCTCTACACTTCCCAAAGCAATAGTGAAATGCGGTACAGAAACTTACAAACTACCTCCGCTGACTGCAGCGTCTTGTATCATAACGTCGGGCTCTTTCATACTGGACTTTAACATTCAAGGAATACGGTTCAGGCATTATGATTATTTATTGTCACTCCCCAACGGTCACACTTATTACACAAAAGAAAAATCATCACCATTGCAATGTGATCACCACGTATGCGAATGGAACAACACCAACTTCTACGGAGGTCCATTCATTATACCCGGCGATCCTGGGAGGGGTCTGTCTCCTATACCTCCTTTCATTGAACAAACAACCGAAGCGTTCCGAGTGACAACGGACCCGAACACCGACTTCAACCCCAATATCACTTGTAAGTTGGATCGGCAATAA

Protein

MYDNHNAIKTERVTTYNSVSGGAVPAEFYLSQEFYCGKNVYLFVSELYSDIYNMGRGFAPYCKSRAFHFLGFIHFMDDKHYYLEEDPTVVFQMDNYIHGLECHLGICIFRFPFKKGLQHVRDISTLPKAIVKCGTETYKLPPLTAASCIITSGSFILDFNIQGIRFRHYDYLLSLPNGHTYYTKEKSSPLQCDHHVCEWNNTNFYGGPFIIPGDPGRGLSPIPPFIEQTTEAFRVTTDPNTDFNPNITCKLDRQ

Uniprot

A0A194QQB9 A0A212FPM7 A0A2W1BJS4 A0A2H1WF67 A0A3S2TGV8 A0A2A4KBH3 + More
A0A2H1WGC8 A0A2A4K9U7 H9J4D3 A0A194QFH6 A0A194QVW5 A0A2W1BDI1 A0A3S2LW85 A0A212F1P6 A0A2A4JDG7 A0A0N1ICU9 A0A194RAA0 A0A212EHP1

Pubmed

26354079 22118469 28756777 19121390

EMBL

KQ461181 KPJ07703.1 AGBW02002142 OWR55660.1 KZ150239 PZC71923.1 + More
ODYU01008148 SOQ51512.1 RSAL01000153 RVE45698.1 NWSH01000004 PCG81022.1 SOQ51514.1 PCG81001.1 BABH01022098 KQ459053 KPJ04164.1 KPJ07706.1 PZC71925.1 RVE45700.1 AGBW02010837 OWR47659.1 NWSH01002000 PCG69470.1 KQ458530 KPJ05841.1 KQ460500 KPJ14200.1 AGBW02014842 OWR40997.1

Proteomes

UP000053240 UP000007151 UP000283053 UP000218220 UP000005204 UP000053268 + More

PRIDE

H9J4D3

ProteinModelPortal

A0A194QQB9 A0A212FPM7 A0A2W1BJS4 A0A2H1WF67 A0A3S2TGV8 A0A2A4KBH3 + More
A0A2H1WGC8 A0A2A4K9U7 H9J4D3 A0A194QFH6 A0A194QVW5 A0A2W1BDI1 A0A3S2LW85 A0A212F1P6 A0A2A4JDG7 A0A0N1ICU9 A0A194RAA0 A0A212EHP1

KEGG

NA

GO

GO:0016021

Length:

254

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.18663

Exp number, first 60 AAs:

0.25126

Total prob of N-in:

0.27882

outside

1 - 254

Pi

218.200436

Theta

188.46035

Tajima's D

0.899938

CLR

0.162157

CSRT

0.635818209089546

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree