Gene

KWMTBOMO11996

Pre Gene Modal

BGIBMGA004371

Annotation

PREDICTED:_vesicular_inhibitory_amino_acid_transporter_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(-):4849332-4853148      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.822

CDS

ATGTTTAATCTGGGCCGCTTTAAGATACCTCCCATCAAAAATGCCCTAGACGTAGCTCTGCAGACCGTCAGGCAGCAGATGCCTGATAAACCAGGACCGCCACCCCGTCCCCAGCAGAACGTCAGATTCGCCAACTTAGACAATATGGGTGAGAGCTGTGAACTGTCCACCATGAACGAAACTACATCTCCAAGCTACCAGTCGACAAATCCGAATAATCCATTCCTCAGTGGTGAACTACAAGCAGAAGATTCATTCACCAGCTACCAAAACACTTATCCGCAACAGGATGGAATTGCTCCAAGAACCCAGAGCATGCAAAGTGTTGATTTCTATGCGTCGTCTGAAGAAGGTGGTTTCGAAGAATGCGGTGGAAAGCCAGGAGCTAAAATCAACGAGTTTCAAGCTGCATGGAACGTTACTAACGCTATTCAGGGAATGTTCGTGGTGTCCCTCCCATTCGCAGTTCTTCAAGGAGGCTACTGGGCAATTGCCGCTATGATCGGCATCGCTCATATCTGCTGCTACACTGGTAGGATCCTAGTGGAGTGCCTCTATGAAGACGATCCCGTCTCTGGGCAACGGGTCCGCGTCCGTGACTCATACGTCGGTATCGCCAAAGAATGTTTCGGCAGGAAATATGGCGCCAGAATCGTAAACTTGGCCCAGATCATCGAACTACTCATGACTTGTATTCTTTACGTTGTCGTTTGTGGGGACTTAATGATTGGTACATTCCCCGATGGCTCCATAGACACTCGTTCGTGGATGATGCTAACCGGAATATTCCTGCTGCCACTTGGCTTCCTGAAGTCTTTGAAGAGCGTCAGTATGCTATCGTTCTGGTGCACCATGAGTCACTTGATCATAAACGCGATTGTACTAGGCTACTGCATTCTCTATATCGGCGATTGGGGATGGTCGAAAGTCAAATGGAACTTGGACTTTGAAAATTTCCCAATCAGTCTAGGCGTGATCGTCTTCTCGTACACATCTCAAATATTCTTGCCCACTCTGGAAGGGAATATGGAGGATCGATCTAGATTTGAGTGGATGCTCAAATGGTCTCATATCGCAGCTGCGGCTTTTAAGTCTGTTTTTGGATACGTCTGCTTCTTGACCTTCCAAAACGACACTCAACAGGTTATTACGAACAACCTTCGTTCTTCAGGGTTCAAAGGTCTTGTAAATTTTTTCCTTGTAATCAAAGCAGTGCTTAGCTATCCTCTACCTTATTACGCTGCGTGCGATCTATTGGAACGCGCTCTTTTTAGGGGCAAACCGAAAACTCTGTTCCCCGTAATTTACGCTTTGGATGGGGAATTGAAGGTATGGGGTCTCGCTTGGAGACTCGGTGTGATAATGTTCACAATTTTGATGGCGATATTCATTCCGCATTTTACTATTTTAATGGGATTTATCGGTAGTTTCACGGGCACTATGTTGAGTTTCATTTGGCCGGCTTATTTTCATTTGAAACTGAAGGGAAATCAATTAGAAAGTAAGACAATTGCCTACGATTATTTCATTATAGGCCTAGGATTCCTGTTTGGTATCATCGGAATGTACGATGCCGGTTCGGCCCTCGTTAGGGCTTTCAAAATAGGATTACCTTTTTAA

Protein

MFNLGRFKIPPIKNALDVALQTVRQQMPDKPGPPPRPQQNVRFANLDNMGESCELSTMNETTSPSYQSTNPNNPFLSGELQAEDSFTSYQNTYPQQDGIAPRTQSMQSVDFYASSEEGGFEECGGKPGAKINEFQAAWNVTNAIQGMFVVSLPFAVLQGGYWAIAAMIGIAHICCYTGRILVECLYEDDPVSGQRVRVRDSYVGIAKECFGRKYGARIVNLAQIIELLMTCILYVVVCGDLMIGTFPDGSIDTRSWMMLTGIFLLPLGFLKSLKSVSMLSFWCTMSHLIINAIVLGYCILYIGDWGWSKVKWNLDFENFPISLGVIVFSYTSQIFLPTLEGNMEDRSRFEWMLKWSHIAAAAFKSVFGYVCFLTFQNDTQQVITNNLRSSGFKGLVNFFLVIKAVLSYPLPYYAACDLLERALFRGKPKTLFPVIYALDGELKVWGLAWRLGVIMFTILMAIFIPHFTILMGFIGSFTGTMLSFIWPAYFHLKLKGNQLESKTIAYDYFIIGLGFLFGIIGMYDAGSALVRAFKIGLPF

Uniprot

A0A0G3VG13   A0A0L7KYD8   A0A194QRU6   A0A194QF40   A0A2W1BDR2   A0A2A4KB48   + More
A0A2H1WEL5   H9J4D2   A0A212FPI7   A0A1W4WPG4   A0A182RAQ9   A0A182X5R7   A0A182UM66   A0A182KKX8   A0A182HW79   A0A182YAY7   A0A182UH86   A0A182M848   A0A182JW42   A0A182PU62   A0A182WDM9   A0A084WM92   A0A182Q412   D6WTB1   Q17NA9   Q7QHB6   A0A182G6T1   A0A182N272   A0A182FV80   A0A0J7L4I6   W5JR09   A0A151WUY0   A0A154P838   E2B061   A0A1Y1MLQ3   E2BK14   A0A1B0DC91   A0A182IY89   A0A2A3ESL9   A0A087ZP72   A0A232F0M5   A0A195DUW8   K7J3L5   A0A195CPT0   A0A0N0BDH4   A0A1B0GJG0   A0A067REU1   A0A3L8DHH1   B0WTZ1   E9IDH3   A0A0L7R2M8   A0A151I2M6   A0A151JSY3   A0A182SW44   A0A2J7PL46   A0A0C9RFN7   B4LLE4   B4MPR1   E0W0C1   B4KRC5   A0A0Q9WFX1   B4HR23   B4P6N4   A0A026WVI0   A0A1B0AM55   A0A1A9WND5   A0A1A9V7N4   A0A1B0GC12   A0A0Q9XFG5   N6SZH3   A0A3B0JP38   B3NRB6   A0A1A9ZPB1   A0A0J9U1Q3   Q28XH6   A1Z9M6   B4GG52   A0A1J1HPA7   B3MCY7   A0A0K8WGS6   W8C2P8   A0A1W4V009   A0A0A1WMD9   A0A034W957   A0A0N8P048   A0A336LFH0   A0A336L3K1   A0A0K8UGU2   A0A1I8MYN8   A0A0R3NVG8   A0A0L0CRI0   W8BFL4   B4J7M1   F4WEU0   A0A158NQF3   A0A2P8XC56   T1PJM7   A0A2S2QJE9   A0A1S3D1H7   A0A2H8TCW1  

Pubmed

26227816    26354079    28756777    19121390    22118469    20966253    + More
25244985    24438588    18362917    19820115    17510324    12364791    26483478    20920257    23761445    20798317    28004739    28648823    20075255    24845553    30249741    21282665    17994087    18057021    20566863    17550304    24508170    23537049    22936249    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    24495485    25830018    25348373    25315136    26108605    21719571    21347285    29403074   

EMBL

KP657654    AKL78879.1    JTDY01004369    KOB68237.1    KQ461181    KPJ07705.1    + More
KQ459053    KPJ04163.1    KZ150239    PZC71924.1    NWSH01000004    PCG81023.1    ODYU01008148    SOQ51513.1    BABH01022098    BABH01022099    AGBW02002142    OWR55661.1    APCN01001474    AXCM01003398    ATLV01024394    KE525351    KFB51336.1    AXCN02001739    KQ971352    EFA06315.1    CH477201    EAT48145.1    AAAB01008816    EAA05252.2    JXUM01045537    KQ561442    KXJ78573.1    LBMM01000668    KMQ97827.1    ADMH02000424    ETN66556.1    KQ982716    KYQ51729.1    KQ434839    KZC08011.1    GL444408    EFN60918.1    GEZM01029658    GEZM01029657    JAV86008.1    GL448723    EFN83965.1    AJVK01013949    AJVK01013950    AJVK01013951    KZ288186    PBC34745.1    NNAY01001394    OXU24130.1    KQ980322    KYN16631.1    KQ977444    KYN02716.1    KQ435876    KOX70172.1    AJWK01020274    AJWK01020275    AJWK01020276    AJWK01020277    AJWK01020278    KK852513    KDR22282.1    QOIP01000008    RLU19791.1    DS232096    EDS34698.1    GL762454    EFZ21349.1    KQ414666    KOC65026.1    KQ976539    KYM81291.1    KQ981998    KYN30714.1    NEVH01024527    PNF17061.1    GBYB01005796    JAG75563.1    CH940648    EDW61896.1    KRF80309.1    CH963849    EDW74100.1    DS235858    EEB19077.1    CH933808    EDW09341.1    KRF80308.1    CH480816    EDW47820.1    CM000158    EDW90986.1    KK107085    EZA60050.1    JXJN01000343    CCAG010018969    KRG04602.1    APGK01058319    KB741288    KB632322    ENN70653.1    ERL92359.1    OUUW01000001    SPP75349.1    CH954179    EDV56068.1    CM002911    KMY93720.1    CM000071    EAL26340.1    AE013599    AAF58280.1    CH479183    EDW35472.1    CVRI01000011    CRK89228.1    CH902619    EDV36302.1    KPU76122.1    KPU76123.1    GDHF01023087    GDHF01002027    JAI29227.1    JAI50287.1    GAMC01006444    GAMC01006443    JAC00112.1    GBXI01014704    JAC99587.1    GAKP01007743    JAC51209.1    KPU76124.1    UFQS01001955    UFQT01001955    SSX12782.1    SSX32224.1    UFQS01001592    UFQT01001592    SSX11533.1    SSX31100.1    GDHF01026536    JAI25778.1    KRT03029.1    JRES01000023    KNC34846.1    GAMC01006445    JAC00111.1    CH916367    EDW02169.1    GL888109    EGI67289.1    ADTU01023194    PYGN01003319    PSN29587.1    KA648982    AFP63611.1    GGMS01008618    MBY77821.1    GFXV01000146    MBW11951.1   

Proteomes

UP000037510    UP000053240    UP000053268    UP000218220    UP000005204    UP000007151    + More
UP000192223    UP000075900    UP000076407    UP000075903    UP000075882    UP000075840    UP000076408    UP000075902    UP000075883    UP000075881    UP000075885    UP000075920    UP000030765    UP000075886    UP000007266    UP000008820    UP000007062    UP000069940    UP000249989    UP000075884    UP000069272    UP000036403    UP000000673    UP000075809    UP000076502    UP000000311    UP000008237    UP000092462    UP000075880    UP000242457    UP000005203    UP000215335    UP000078492    UP000002358    UP000078542    UP000053105    UP000092461    UP000027135    UP000279307    UP000002320    UP000053825    UP000078540    UP000078541    UP000075901    UP000235965    UP000008792    UP000007798    UP000009046    UP000009192    UP000001292    UP000002282    UP000053097    UP000092460    UP000091820    UP000078200    UP000092444    UP000019118    UP000030742    UP000268350    UP000008711    UP000092445    UP000001819    UP000000803    UP000008744    UP000183832    UP000007801    UP000192221    UP000095301    UP000037069    UP000001070    UP000007755    UP000005205    UP000245037    UP000079169   

PRIDE

H9J4D2    A1Z9M6   

Pfam

PF01490   Aa_trans

Interpro

IPR013057   AA_transpt_TM       

ProteinModelPortal

A0A0G3VG13   A0A0L7KYD8   A0A194QRU6   A0A194QF40   A0A2W1BDR2   A0A2A4KB48   + More
A0A2H1WEL5   H9J4D2   A0A212FPI7   A0A1W4WPG4   A0A182RAQ9   A0A182X5R7   A0A182UM66   A0A182KKX8   A0A182HW79   A0A182YAY7   A0A182UH86   A0A182M848   A0A182JW42   A0A182PU62   A0A182WDM9   A0A084WM92   A0A182Q412   D6WTB1   Q17NA9   Q7QHB6   A0A182G6T1   A0A182N272   A0A182FV80   A0A0J7L4I6   W5JR09   A0A151WUY0   A0A154P838   E2B061   A0A1Y1MLQ3   E2BK14   A0A1B0DC91   A0A182IY89   A0A2A3ESL9   A0A087ZP72   A0A232F0M5   A0A195DUW8   K7J3L5   A0A195CPT0   A0A0N0BDH4   A0A1B0GJG0   A0A067REU1   A0A3L8DHH1   B0WTZ1   E9IDH3   A0A0L7R2M8   A0A151I2M6   A0A151JSY3   A0A182SW44   A0A2J7PL46   A0A0C9RFN7   B4LLE4   B4MPR1   E0W0C1   B4KRC5   A0A0Q9WFX1   B4HR23   B4P6N4   A0A026WVI0   A0A1B0AM55   A0A1A9WND5   A0A1A9V7N4   A0A1B0GC12   A0A0Q9XFG5   N6SZH3   A0A3B0JP38   B3NRB6   A0A1A9ZPB1   A0A0J9U1Q3   Q28XH6   A1Z9M6   B4GG52   A0A1J1HPA7   B3MCY7   A0A0K8WGS6   W8C2P8   A0A1W4V009   A0A0A1WMD9   A0A034W957   A0A0N8P048   A0A336LFH0   A0A336L3K1   A0A0K8UGU2   A0A1I8MYN8   A0A0R3NVG8   A0A0L0CRI0   W8BFL4   B4J7M1   F4WEU0   A0A158NQF3   A0A2P8XC56   T1PJM7   A0A2S2QJE9   A0A1S3D1H7   A0A2H8TCW1  

KEGG

101740763    K15015 solute carrier family 32 (vesicular inhibitory amino acid transporter) | (RefSeq) vesicular i

GO

GO:0016021   GO:0044292   GO:0015495   GO:0044306   GO:0098700   GO:0015171   GO:0030285   GO:0003333   GO:0030431   GO:0007632   GO:0051932   GO:0015812   GO:0015185  

Length:

539

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

197.42896

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04098

outside

1  -  153

TMhelix

154  -  176

inside

177  -  223

TMhelix

224  -  246

outside

247  -  255

TMhelix

256  -  273

inside

274  -  285

TMhelix

286  -  308

outside

309  -  350

TMhelix

351  -  373

inside

374  -  393

TMhelix

394  -  416

outside

417  -  445

TMhelix

446  -  465

inside

466  -  466

TMhelix

467  -  489

outside

490  -  503

TMhelix

504  -  523

inside

524  -  539

 

 

Pi

175.633252

Theta

152.275404

Tajima's D

-1.503432

CLR

0

CSRT

0.0571471426428679

Interpretation

Uncertain