Silkworm Genome Informatics Database

Gene

KWMTBOMO11995

Pre Gene Modal

BGIBMGA004372

Annotation

PREDICTED:_uncharacterized_protein_LOC106135815_[Amyelois_transitella]

Location

Bomo_Chr20(-):4840664-4846268 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.727

CDS

ATGGACCGCCTTATTCGAGTATGCGCGCTCCTTGCATTATGTTCACTCTTCATACGGATAACAGCATACAATATCCGCAATCACCCATGCTGTCAAGAGCCAAACGAGAACCTGACCCTAGCGATGATCATAGACGCCTTCGAAATATACGGTCACGATCCTACTGACAAATTAGACAACCTGTGGCTATACCAGAACGAGATGCTGAGGATCAAAACAGCAGAAGATCAGTATCTGATAAACGAACGAATCCACGTGGCCACAGATCATTTGGGAAGATTTATTAAGCTCCATATTCAGGAATTGAAGGTTTTGCTGATCACCTTAGATGACGTCATAGACAACATGCTCACGATGTACGAGAACCATAACTCTATAGCTGCCGAACGTAAAGCTACGTACACTGGTGGACCTGTTCCTATGGAGTTTTATCTTAGTCAAGAGTTCTACTGCGGCAAGAACGTGTACCTCTTCGTCTCTGAGCTGTACAGCGACATCTACAACATGGGACGCGGTCCTGCGCCCTACTGCAAGGACAGGTCCTTCGTCTTCCTCGGGCTCCTGCATTACCACGACGAGCAAAAGTACTATTTGCTCGACGACCCAAGCATCTCGTTCCCCACCGACAACTATTTACACGGACTGGAGTGTCACATCGGTATCTGTATATTTCGCTTCCCGTTTAAGAAACTCCTTCAGAACGAACGCGATGTGGTAACATTGCCGAAGGCCATAGTGAAGTGTGGTCTGATCATGTACAAGCTGCCTCCACTGACCGCCACCTCGTGTGTCATCACATCGGGATCTTTCATACTAGATTTCAATATCCAAGGCTTGCGGTATCGCCACTACGACTACTTATTGACAGTACCAAACGGTTACACGTACTACACTAAGGAACCAAACTCTCCGCTTATTTGCGACCACCACGTCTGCGAATGGAACTACACAAATCATTATGGCGGTGAATATAAATCTATTTGGAGTTTTTTTTTTAAAGTAAATACGGTCGCTAATTCACAGCTCACCTGA

Protein

MDRLIRVCALLALCSLFIRITAYNIRNHPCCQEPNENLTLAMIIDAFEIYGHDPTDKLDNLWLYQNEMLRIKTAEDQYLINERIHVATDHLGRFIKLHIQELKVLLITLDDVIDNMLTMYENHNSIAAERKATYTGGPVPMEFYLSQEFYCGKNVYLFVSELYSDIYNMGRGPAPYCKDRSFVFLGLLHYHDEQKYYLLDDPSISFPTDNYLHGLECHIGICIFRFPFKKLLQNERDVVTLPKAIVKCGLIMYKLPPLTATSCVITSGSFILDFNIQGLRYRHYDYLLTVPNGYTYYTKEPNSPLICDHHVCEWNYTNHYGGEYKSIWSFFFKVNTVANSQLT

Uniprot

A0A3S2LW85 A0A194QVW5 A0A2H1WGC8 A0A2A4K9U7 A0A194QFH6 A0A2W1BDI1 + More
H9J4D3 A0A212FPM7 A0A2A4KBH3 A0A2H1WF67 A0A3S2TGV8 A0A194QQB9 A0A194RAA0 A0A2A4JDG7 A0A0N1ICU9 A0A212EHP1 A0A194Q2T2

Pubmed

26354079 28756777 19121390 22118469

EMBL

RSAL01000153 RVE45700.1 KQ461181 KPJ07706.1 ODYU01008148 SOQ51514.1 + More
NWSH01000004 PCG81001.1 KQ459053 KPJ04164.1 KZ150239 PZC71925.1 BABH01022098 AGBW02002142 OWR55660.1 PCG81022.1 SOQ51512.1 RVE45698.1 KPJ07703.1 KQ460500 KPJ14200.1 NWSH01002000 PCG69470.1 KQ458530 KPJ05841.1 AGBW02014842 OWR40997.1 KQ459589 KPI97715.1

Proteomes

UP000283053 UP000053240 UP000218220 UP000053268 UP000005204 UP000007151 + More

PRIDE

H9J4D3

ProteinModelPortal

A0A3S2LW85 A0A194QVW5 A0A2H1WGC8 A0A2A4K9U7 A0A194QFH6 A0A2W1BDI1 + More
H9J4D3 A0A212FPM7 A0A2A4KBH3 A0A2H1WF67 A0A3S2TGV8 A0A194QQB9 A0A194RAA0 A0A2A4JDG7 A0A0N1ICU9 A0A212EHP1 A0A194Q2T2

KEGG

NA

GO

GO:0016021

SignalP

Position: 1 - 22, Likelihood: 0.976763

Length:

343

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.80306

Exp number, first 60 AAs:

3.65413

Total prob of N-in:

0.20183

outside

1 - 343

Pi

232.197469

Theta

172.183533

Tajima's D

1.095297

CLR

0.000402

CSRT

0.685615719214039

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree