Gene

KWMTBOMO11992

Pre Gene Modal

BGIBMGA004495

Annotation

PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_9-like_[Amyelois_transitella]

Location

Bomo_Chr20(+):4828909-4831588      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.636 Mitochondrial   Reliability : 2.231

CDS

ATGAGAACTCTTGAAGCTTATCATGTTGCAAGATATGTTATACGTTACCATCAAGTTATTTTACGTAACGAATTGGACAAAAATAAGGCGGTTTGCGACCCTAAAGAACATCGTCGATTATTGAGAGTGGCAGAAAACGAATTGTTTATGAGTCAGCATCCTATCCCGGTGGCTAAATTTGCTAGATCGGTGGGTATTGCCGGCGGTGTAGCCTACGATCGTGTTCAAGTGATACCTGATTGGGTAATGGATTATTGGCATCCTCTAGAAAAGGCACATTATCCTGAATATTTCAAGAGACGCGAGTGTAGGAAATGTGAATACATTAAGAAATGGAATGACGGTGAAATACGTTAG

Protein

MRTLEAYHVARYVIRYHQVILRNELDKNKAVCDPKEHRRLLRVAENELFMSQHPIPVAKFARSVGIAGGVAYDRVQVIPDWVMDYWHPLEKAHYPEYFKRRECRKCEYIKKWNDGEIR

Similarity

Belongs to the complex I LYR family.

Uniprot

A0A3S2PA55   A0A212ERR2   A0A2W1BFE6   A0A0N1PF02   A0A0L7L7M5   A0A194QQC3   + More
A0A2W1BN76   A0A0K8TF84   S4PGT1   A0A2A4JFX2   A0A212F5Z4   A0A2H1WY34   A0A3S2NXQ3   I4DKX5   A0A0N1PKC0   A0A194Q5G1   H9J4P8   A0A1E1WP10   A0A1L8E0S0   A0A1B0DM94   A0A1J1HJ76   A0A0L7L1L0   A0A0K8UZB2   A0A034WP61   A0A1D1VUT6   A0A0C9Q8T1   A0A087ZGA4   W5J6A9   A0A2R7WEE7   T1DNN2   A0A182F6A2   D6WPG1   A0A2M3Z3Z9   A0A2M4C2F8   A0A226DQD4   A0A2M4AB28   A0A0A1XQC8   A0A067QX80   T1E372   A0A023EGM1   Q16TI5   A0A1D2MDT5   A0A1Y1MPD4   A0A1Q3FUD6   A0A023EGM8   A0A1W4XID0   A0A1B6CL42   A0A0A9W0G0   A0A1S3DH47   A0A0L0BS09   W8BI49   A0A182J8Z5   T1FD33   A0A084W220   A0A1A9W6V2   A0A023FGZ8   T1PHU2   A0A2J7PRZ2   A0A069DPJ6   A0A0B6Y428   Q6XHM8   J3JXX6   A0A1I8N1Q0   R7TNG2   A0A182NUK3   A0A182K722   A0A182PFI5   A0A182QHP1   A0A2P8YSR3   A0A182YDL9   A0A182VBC1   A0A182U9W0   A0A182RHF5   B4KK58   A0A023FTT4   N6TZC7   A0A182X785   A0A182KTP9   Q7Q1B8   A0A182HRL5   B3MV90   Q9VJZ4   A0A1V9WZ15   A0A182TC89   A0A023GEZ9   G3MRM9   B3NAX8   A0A0M4EBI5   B4M973   B4IEK4   B4Q4S5   A0A182M5J7   A0A087TQK9   B4MWG7   A0A131XLT8   L7M0I8   A0A026W8A6   V3ZZD9   A0A182WGT7  

Pubmed

22118469    28756777    26354079    26227816    23622113    22651552    + More
19121390    25348373    27649274    20920257    18362917    19820115    25830018    24845553    24330624    24945155    26483478    17510324    27289101    28004739    25401762    26823975    26108605    24495485    23254933    24438588    26334808    14525923    17994087    17550304    22516182    23537049    25315136    29403074    25244985    20966253    12364791    14747013    17210077    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28327890    22216098    22936249    28049606    25576852    24508170    30249741   

EMBL

RSAL01000153    RVE45702.1    AGBW02012954    OWR44177.1    KZ150239    PZC71927.1    + More
KQ459053    KQ458392    KPJ04166.1    KPJ05919.1    JTDY01002400    KOB71488.1    KQ461181    KPJ07708.1    KZ149954    PZC76512.1    GBRD01002006    JAG63815.1    GAIX01006075    JAA86485.1    NWSH01001732    PCG70302.1    AGBW02010110    OWR49157.1    ODYU01011936    SOQ57971.1    RSAL01000030    RVE51669.1    AK401943    BAM18565.1    KQ459838    KPJ19733.1    KQ459460    KPJ00787.1    BABH01022068    BABH01022069    GDQN01002332    JAT88722.1    GFDF01001783    JAV12301.1    AJVK01006914    CVRI01000006    CRK88069.1    JTDY01003539    KOB69377.1    GDHF01020315    JAI31999.1    GAKP01002518    JAC56434.1    BDGG01000012    GAV05240.1    GBYB01010673    JAG80440.1    GGFL01002256    MBW66434.1    ADMH02002020    ETN59967.1    KK854545    PTY16725.1    GAMD01002690    JAA98900.1    KQ971354    EFA07450.1    GGFM01002493    MBW23244.1    GGFJ01010210    MBW59351.1    LNIX01000014    OXA47054.1    GGFK01004639    MBW37960.1    GBXI01001554    JAD12738.1    KK852854    KDR14969.1    GALA01000630    JAA94222.1    JXUM01025282    GAPW01005645    GAPW01005643    GAPW01005642    KQ560717    JAC07956.1    KXJ81161.1    CH477649    EAT37807.1    LJIJ01001669    ODM91109.1    GEZM01025263    JAV87533.1    GFDL01003868    JAV31177.1    GAPW01005644    JAC07954.1    GEDC01023247    JAS14051.1    GBHO01042285    GBRD01003310    GDHC01009046    JAG01319.1    JAG62511.1    JAQ09583.1    JRES01001455    KNC22783.1    GAMC01017186    JAB89369.1    AMQM01006394    KB097417    ESN97219.1    ATLV01019473    KE525272    KFB44264.1    GBBK01004188    JAC20294.1    KA647458    AFP62087.1    NEVH01021939    PNF19104.1    GBGD01003347    JAC85542.1    HACG01004177    CEK51042.1    AY232155    CM000157    AAR10178.1    EDW88298.1    BT128098    KB631871    AEE63059.1    ERL86856.1    AMQN01013240    KB310063    ELT92615.1    AXCN02002063    PYGN01000381    PSN47288.1    CH933807    EDW11576.1    GBBL01002233    JAC25087.1    APGK01045606    KB741037    ENN74630.1    AAAB01008980    EAA14441.3    APCN01001719    CH902624    EDV33155.1    AE014134    AY070784    AAF53290.1    AAL48406.1    AHN54403.1    MNPL01032879    OQR66346.1    GBBM01002989    JAC32429.1    JO844530    AEO36147.1    CH954177    EDV58692.1    CP012523    ALC39964.1    CH940654    EDW57749.1    CH480831    EDW46031.1    CM000361    CM002910    EDX04913.1    KMY90084.1    AXCM01008671    KK116314    KFM67398.1    CH963857    EDW76108.1    GEFH01002090    JAP66491.1    GACK01007178    JAA57856.1    KK107347    QOIP01000007    EZA52290.1    RLU20440.1    KB201362    ESO96898.1   

Proteomes

UP000283053    UP000007151    UP000053268    UP000037510    UP000053240    UP000218220    + More
UP000005204    UP000092462    UP000183832    UP000186922    UP000000673    UP000069272    UP000007266    UP000198287    UP000027135    UP000069940    UP000249989    UP000008820    UP000094527    UP000192223    UP000079169    UP000037069    UP000075880    UP000015101    UP000030765    UP000091820    UP000235965    UP000002282    UP000030742    UP000095301    UP000014760    UP000075884    UP000075881    UP000075885    UP000075886    UP000245037    UP000076408    UP000075903    UP000075902    UP000075900    UP000009192    UP000019118    UP000076407    UP000075882    UP000007062    UP000075840    UP000007801    UP000000803    UP000192247    UP000075901    UP000008711    UP000092553    UP000008792    UP000001292    UP000000304    UP000075883    UP000054359    UP000007798    UP000053097    UP000279307    UP000030746    UP000075920   

PRIDE

H9J4P8    Q9VJZ4   

Pfam

PF05347   Complex1_LYR

Interpro

IPR033034   NDUFB9        + More
IPR008011   Complex1_LYR       

ProteinModelPortal

A0A3S2PA55   A0A212ERR2   A0A2W1BFE6   A0A0N1PF02   A0A0L7L7M5   A0A194QQC3   + More
A0A2W1BN76   A0A0K8TF84   S4PGT1   A0A2A4JFX2   A0A212F5Z4   A0A2H1WY34   A0A3S2NXQ3   I4DKX5   A0A0N1PKC0   A0A194Q5G1   H9J4P8   A0A1E1WP10   A0A1L8E0S0   A0A1B0DM94   A0A1J1HJ76   A0A0L7L1L0   A0A0K8UZB2   A0A034WP61   A0A1D1VUT6   A0A0C9Q8T1   A0A087ZGA4   W5J6A9   A0A2R7WEE7   T1DNN2   A0A182F6A2   D6WPG1   A0A2M3Z3Z9   A0A2M4C2F8   A0A226DQD4   A0A2M4AB28   A0A0A1XQC8   A0A067QX80   T1E372   A0A023EGM1   Q16TI5   A0A1D2MDT5   A0A1Y1MPD4   A0A1Q3FUD6   A0A023EGM8   A0A1W4XID0   A0A1B6CL42   A0A0A9W0G0   A0A1S3DH47   A0A0L0BS09   W8BI49   A0A182J8Z5   T1FD33   A0A084W220   A0A1A9W6V2   A0A023FGZ8   T1PHU2   A0A2J7PRZ2   A0A069DPJ6   A0A0B6Y428   Q6XHM8   J3JXX6   A0A1I8N1Q0   R7TNG2   A0A182NUK3   A0A182K722   A0A182PFI5   A0A182QHP1   A0A2P8YSR3   A0A182YDL9   A0A182VBC1   A0A182U9W0   A0A182RHF5   B4KK58   A0A023FTT4   N6TZC7   A0A182X785   A0A182KTP9   Q7Q1B8   A0A182HRL5   B3MV90   Q9VJZ4   A0A1V9WZ15   A0A182TC89   A0A023GEZ9   G3MRM9   B3NAX8   A0A0M4EBI5   B4M973   B4IEK4   B4Q4S5   A0A182M5J7   A0A087TQK9   B4MWG7   A0A131XLT8   L7M0I8   A0A026W8A6   V3ZZD9   A0A182WGT7  

PDB

6G72     E-value=1.51138e-12,     Score=169

KEGG

101740624    K03965 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9 | (RefSeq) NADH dehydrogenase [ub

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0006120   GO:0005747   GO:0003954  

PANTHER

PTHR12868  

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01209

Exp number, first 60 AAs:

0.00202

Total prob of N-in:

0.33702

outside

1  -  118

 

 

Pi

186.81978

Theta

157.45434

Tajima's D

0.617418

CLR

0.338

CSRT

0.551072446377681

Interpretation

Uncertain