Silkworm Genome Informatics Database

Gene

KWMTBOMO11989

Pre Gene Modal

BGIBMGA004494

Annotation

PREDICTED:_protein_NDUFAF4_homolog_[Bombyx_mori]

Location

Bomo_Chr20(+):4801269-4805033 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.141

CDS

ATGTTATCAGTTTTTTTTTATTTCCAGGAATGGCTGGAACAAATAGAATCATGGCTGATAAAACAAGGAAACCTATATAGGAAACACAAGTACCAGGACACCGAAAGACTGCCAATACACGAGTTCGGAATATACTCGATCGCGGAAAGAAATTTTAGACAGAAGCCAGTTTTACTGCAAAAATCACCTTCTCCACCACCTCCGATACAAAGGCACTTACGTCCTGATATTGCGGCTCCAGTAAGACCCCAGGCATCCAAAGTTCGAGATATTAACAAGACTGTCAAGAAAGAACAACTCGAGGGGCGAATAAAATCAGCTAAACCTATTTCATCGATAAATAATATAAAAAATAAAGGTGATTTCACCAGTGATATTATACCAAAAAGTGATTTAGAATCTGTCTCTACGAGGTCTCCTCGTCCTCAATCGCGAACTTCGAGCGCTCGTTCTAATTCTACGATTCAGCCAAATGTAAAAAGTAAAGAATCTAACATAAAATCAACCTATCGTATTTCTTCAAACGAAATGTATCCTGTTCACATGGTGAAAAATGTACACGACGCTAGGAATTTTTTGATGCGGAGTAGTATATTTAATGATCACCGAGGAAGACAGTTGAGTTCAACAGTCACAGTGACACCGGGGTGCACCATACGAATACCAACGAATACAGCTCCTAGCTACGCAGCTCACATGACACCGTCGTTTTTTAATGCAGCTTCTAACACGACACAAAAGGGAAATTTAACACAGAACAGACGTAGGCTCGGACGTAGCCCCAGTCCATCACCTACTCGTGTATTAAGTAAACAAACACGAGCTACGAATACGCCTCCTTCACCTGCCGAGAAGTCCGTTGAGAAGGGATCATCGAGGCTCGCGTTAAAAGAGGCTCTATCAAGACTCAAATTAGCGAAGGCATTAAGACCGGTCAAAGCTTTTAACATCGAGAACAGAGCTCATCGTGTGATTTCAAAAGAAAAACCTACACCGGCCCCCAGATATCCAGGAAATATTGAAGATTTGAAACGAACTTTAGAAGCTGACCCGAATATTGACGAAAAATTAGATAAAAAAGATCCTGCGCTTGACGATAGACTGAAGGATGTTTATGTAACATCTTACGGTCGGTCTGAAGATGACGTTACGCGGGAACTACGAAAAAAACAAAGCGAGGTAAGGCCTTTGCCTCAGGACCGGAAATTAGTCGAAGATTTTGAATTTGGATTTAGAGAACCGGAAAAAATTAAATATGGACGCGCTACACTTAGACAAGTAGTGACCTTTATTTCCGCTCATCAAATAGACAGCAAAGAAGCTAGTCCAGATAAAATAGCATTTGAATATAAACTGAAGCTGGAAGACGTGGAAAGCATATTAAAATATTTTAAAACTTTTGAAATTTATATACCTGAAACCAAGAAAACTCCAGCAATGTTTGCAGGACCAGCTCATTTGAAAAAAGAAATTATCGAATCACAAAAGAAGGCAATTGAAGAAAACAGTATGTTGGACGCTAAAACATTAAGACAAAAGAAAAGTTAG

Protein

MLSVFFYFQEWLEQIESWLIKQGNLYRKHKYQDTERLPIHEFGIYSIAERNFRQKPVLLQKSPSPPPPIQRHLRPDIAAPVRPQASKVRDINKTVKKEQLEGRIKSAKPISSINNIKNKGDFTSDIIPKSDLESVSTRSPRPQSRTSSARSNSTIQPNVKSKESNIKSTYRISSNEMYPVHMVKNVHDARNFLMRSSIFNDHRGRQLSSTVTVTPGCTIRIPTNTAPSYAAHMTPSFFNAASNTTQKGNLTQNRRRLGRSPSPSPTRVLSKQTRATNTPPSPAEKSVEKGSSRLALKEALSRLKLAKALRPVKAFNIENRAHRVISKEKPTPAPRYPGNIEDLKRTLEADPNIDEKLDKKDPALDDRLKDVYVTSYGRSEDDVTRELRKKQSEVRPLPQDRKLVEDFEFGFREPEKIKYGRATLRQVVTFISAHQIDSKEASPDKIAFEYKLKLEDVESILKYFKTFEIYIPETKKTPAMFAGPAHLKKEIIESQKKAIEENSMLDAKTLRQKKS

Uniprot

A0A2H1WRL6 A0A2A4K9N7

EMBL

ODYU01010539 SOQ55719.1 NWSH01000004 PCG81005.1

Proteomes

UP000218220

Pfam

PF00782   DSPc        + More
PF06784   UPF0240
PF14671   DSPn

Interpro

IPR000387   TYR_PHOSPHATASE_dom        + More
IPR026070   CDC14
IPR000340   Dual-sp_phosphatase_cat-dom
IPR029021   Prot-tyrosine_phosphatase-like
IPR009622   NDUFAF4
IPR029260   DSPn
IPR016130   Tyr_Pase_AS

SUPFAM

SSF52799 SSF52799

Gene 3D

3.90.190.10

ProteinModelPortal

A0A2H1WRL6 A0A2A4K9N7

KEGG

101740353 K18161 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 | (RefSeq) protein NDUFA

GO

GO:0032981 GO:0008138 GO:0004725 GO:0007096 GO:0008270 GO:0005840 GO:0006412 GO:0015074 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

PANTHER

PTHR23339:SF27

Length:

515

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1e-05

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00045

outside

1 - 515

Pi

33.226645

Theta

58.562886

Tajima's D

-1.633489

CLR

196.160727

CSRT

0.0431478426078696

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics