Gene

KWMTBOMO11974  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004488

Annotation

NADH_dehydrogenase_[Operophtera_brumata]

Location

Bomo_Chr20(+):4517810-4523106      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.888 Mitochondrial   Reliability : 2.125

CDS

ATGGCGCAGATTCCTTTAGGAGTCAAAACTCATGCTCAAAAAGTCTGTAGCCTTTATAAAAGGGCTTTACGTAATTTAGAAGCGTACTACGACCGCCGACATGTGTACCGATACCAAGCTGTATTGTTACGTGAGAGGTTTGACAAGCATGCCAAGGAGACCAATATGATTAAAGCAAATGAGTTTCTGAAAGAGGGTGAAGAGGAATTGTTTCTGAAGCAACATCCCATACCTAAATATTTTGCCACAAGTCCTGGAGGTGTAGCTCATGAGCGTGTAGTCACTCCCCCTGATTGGGTCTTGGACTATTGGCATCCTCTTGAGAAAGCCCAATATCCTGAATATTTCAAGAAACGCGAGCAAAGAAAGAAAGAGTTCGTTGCTATGTGGGAGAAGGAGTATGGCAAGCCAGATGAGAAAGATAAGCATCATTAG

Protein

MAQIPLGVKTHAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERFDKHAKETNMIKANEFLKEGEEELFLKQHPIPKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDKHH

Similarity

Belongs to the complex I LYR family.

Uniprot

H9J4P8   S4PGT1   A0A0L7L1L0   A0A0N1PKC0   I4DKX5   A0A2A4JFX2   + More
A0A2W1BN76   A0A194Q5G1   A0A2H1WY34   A0A212F5Z4   A0A1E1WP10   A0A0K8TF84   A0A3S2NXQ3   A0A0A1XQC8   A0A0C9Q8T1   A0A034WP61   A0A0K8UZB2   A0A1L8E0S0   W8BI49   B4MWG7   B4IEK4   B4Q4S5   Q9VJZ4   A0A1B0DM94   Q6XHM8   A0A1I8N1Q0   A0A0L0BS09   T1PHU2   B4KK58   B3MV90   A0A0M4EBI5   B3NAX8   B4M973   A0A1B0FBI3   B4JP74   A0A1I8PE47   A0A1A9ZHA4   A0A1A9V7A5   A0A1L8EET1   A0A067QX80   B5DHF4   B4GKB2   Q16TI5   A0A023EGM1   A0A1A9YFU3   A0A1W4V7C8   A0A1A9W6V2   A0A182J8Z5   A0A3B0KKU1   A0A1B0B0J6   A0A1D2MDT5   A0A023EGM8   A0A1Q3FUD6   A0A2M4AB28   T1E372   A0A182PFI5   A0A182NUK3   A0A1Y1MPD4   A0A084W220   A0A2M4C2F8   A0A2M3Z3Z9   T1DNN2   A0A182F6A2   A0A087ZGA4   W5J6A9   A0A182K722   A0A182QHP1   A0A182VBC1   A0A182U9W0   A0A182RHF5   A0A182YDL9   A0A226DQD4   A0A1W4XID0   A0A182X785   D6WPG1   A0A182KTP9   Q7Q1B8   A0A182HRL5   A0A2P8YSR3   A0A182M5J7   A0A182WGT7   A0A182TC89   A0A2L2Y2J3   A0A087TQK9   A0A2R5LFI7   N6TZC7   J3JXX6   A0A1B6CL42   A0A293N2K5   A0A2R7WEE7   A0A0K8RAU1   A0A023FGZ8   A0A1B6HTN6   A0A1E1XV88   A0A023FGM2   A0A023FTT4   A0A1B6FYR4   A0A0L7R737   A0A1J1HJ76   A0A2S2R086  

Pubmed

19121390    23622113    26227816    26354079    22651552    28756777    + More
22118469    25830018    25348373    24495485    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    14525923    17550304    25315136    26108605    24845553    15632085    17510324    24945155    26483478    27289101    24330624    28004739    24438588    20920257    25244985    18362917    19820115    20966253    12364791    14747013    17210077    29403074    26561354    23537049    22516182    29209593   

EMBL

BABH01022068    BABH01022069    GAIX01006075    JAA86485.1    JTDY01003539    KOB69377.1    + More
KQ459838    KPJ19733.1    AK401943    BAM18565.1    NWSH01001732    PCG70302.1    KZ149954    PZC76512.1    KQ459460    KPJ00787.1    ODYU01011936    SOQ57971.1    AGBW02010110    OWR49157.1    GDQN01002332    JAT88722.1    GBRD01002006    JAG63815.1    RSAL01000030    RVE51669.1    GBXI01001554    JAD12738.1    GBYB01010673    JAG80440.1    GAKP01002518    JAC56434.1    GDHF01020315    JAI31999.1    GFDF01001783    JAV12301.1    GAMC01017186    JAB89369.1    CH963857    EDW76108.1    CH480831    EDW46031.1    CM000361    CM002910    EDX04913.1    KMY90084.1    AE014134    AY070784    AAF53290.1    AAL48406.1    AHN54403.1    AJVK01006914    AY232155    CM000157    AAR10178.1    EDW88298.1    JRES01001455    KNC22783.1    KA647458    AFP62087.1    CH933807    EDW11576.1    CH902624    EDV33155.1    CP012523    ALC39964.1    CH954177    EDV58692.1    CH940654    EDW57749.1    CCAG010020501    CH916372    EDV98704.1    GFDG01001588    JAV17211.1    KK852854    KDR14969.1    CH379058    EDY69730.1    CH479184    EDW37078.1    CH477649    EAT37807.1    JXUM01025282    GAPW01005645    GAPW01005643    GAPW01005642    KQ560717    JAC07956.1    KXJ81161.1    OUUW01000010    SPP85771.1    JXJN01006768    LJIJ01001669    ODM91109.1    GAPW01005644    JAC07954.1    GFDL01003868    JAV31177.1    GGFK01004639    MBW37960.1    GALA01000630    JAA94222.1    GEZM01025263    JAV87533.1    ATLV01019473    KE525272    KFB44264.1    GGFJ01010210    MBW59351.1    GGFM01002493    MBW23244.1    GAMD01002690    JAA98900.1    GGFL01002256    MBW66434.1    ADMH02002020    ETN59967.1    AXCN02002063    LNIX01000014    OXA47054.1    KQ971354    EFA07450.1    AAAB01008980    EAA14441.3    APCN01001719    PYGN01000381    PSN47288.1    AXCM01008671    IAAA01004178    LAA02396.1    KK116314    KFM67398.1    GGLE01004113    MBY08239.1    APGK01045606    KB741037    ENN74630.1    BT128098    KB631871    AEE63059.1    ERL86856.1    GEDC01023247    JAS14051.1    GFWV01022627    MAA47354.1    KK854545    PTY16725.1    GADI01005825    JAA67983.1    GBBK01004188    JAC20294.1    GECU01029687    GECU01005175    JAS78019.1    JAT02532.1    GFAA01000553    JAU02882.1    GBBK01004187    JAC20295.1    GBBL01002233    JAC25087.1    GECZ01014441    JAS55328.1    KQ414642    KOC66697.1    CVRI01000006    CRK88069.1    GGMS01014234    MBY83437.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000218220    UP000053268    UP000007151    + More
UP000283053    UP000007798    UP000001292    UP000000304    UP000000803    UP000092462    UP000002282    UP000095301    UP000037069    UP000009192    UP000007801    UP000092553    UP000008711    UP000008792    UP000092444    UP000001070    UP000095300    UP000092445    UP000078200    UP000027135    UP000001819    UP000008744    UP000008820    UP000069940    UP000249989    UP000092443    UP000192221    UP000091820    UP000075880    UP000268350    UP000092460    UP000094527    UP000075885    UP000075884    UP000030765    UP000069272    UP000000673    UP000075881    UP000075886    UP000075903    UP000075902    UP000075900    UP000076408    UP000198287    UP000192223    UP000076407    UP000007266    UP000075882    UP000007062    UP000075840    UP000245037    UP000075883    UP000075920    UP000075901    UP000054359    UP000019118    UP000030742    UP000053825    UP000183832   

PRIDE

H9J4P8    Q9VJZ4   

Pfam

PF05347   Complex1_LYR

Interpro

IPR008011   Complex1_LYR        + More
IPR033034   NDUFB9       

ProteinModelPortal

H9J4P8   S4PGT1   A0A0L7L1L0   A0A0N1PKC0   I4DKX5   A0A2A4JFX2   + More
A0A2W1BN76   A0A194Q5G1   A0A2H1WY34   A0A212F5Z4   A0A1E1WP10   A0A0K8TF84   A0A3S2NXQ3   A0A0A1XQC8   A0A0C9Q8T1   A0A034WP61   A0A0K8UZB2   A0A1L8E0S0   W8BI49   B4MWG7   B4IEK4   B4Q4S5   Q9VJZ4   A0A1B0DM94   Q6XHM8   A0A1I8N1Q0   A0A0L0BS09   T1PHU2   B4KK58   B3MV90   A0A0M4EBI5   B3NAX8   B4M973   A0A1B0FBI3   B4JP74   A0A1I8PE47   A0A1A9ZHA4   A0A1A9V7A5   A0A1L8EET1   A0A067QX80   B5DHF4   B4GKB2   Q16TI5   A0A023EGM1   A0A1A9YFU3   A0A1W4V7C8   A0A1A9W6V2   A0A182J8Z5   A0A3B0KKU1   A0A1B0B0J6   A0A1D2MDT5   A0A023EGM8   A0A1Q3FUD6   A0A2M4AB28   T1E372   A0A182PFI5   A0A182NUK3   A0A1Y1MPD4   A0A084W220   A0A2M4C2F8   A0A2M3Z3Z9   T1DNN2   A0A182F6A2   A0A087ZGA4   W5J6A9   A0A182K722   A0A182QHP1   A0A182VBC1   A0A182U9W0   A0A182RHF5   A0A182YDL9   A0A226DQD4   A0A1W4XID0   A0A182X785   D6WPG1   A0A182KTP9   Q7Q1B8   A0A182HRL5   A0A2P8YSR3   A0A182M5J7   A0A182WGT7   A0A182TC89   A0A2L2Y2J3   A0A087TQK9   A0A2R5LFI7   N6TZC7   J3JXX6   A0A1B6CL42   A0A293N2K5   A0A2R7WEE7   A0A0K8RAU1   A0A023FGZ8   A0A1B6HTN6   A0A1E1XV88   A0A023FGM2   A0A023FTT4   A0A1B6FYR4   A0A0L7R737   A0A1J1HJ76   A0A2S2R086  

PDB

6G72     E-value=2.9734e-23,     Score=262

KEGG

101739528    K03965 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9 | (RefSeq) NADH dehydrogenase [ub

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0006120   GO:0005747   GO:0003954  

PANTHER

PTHR12868  

Length:

144

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11986

outside

1  -  144

 

 

Pi

224.71326

Theta

161.894295

Tajima's D

1.330599

CLR

103.738574

CSRT

0.741112944352782

Interpretation

Uncertain