Gene

KWMTBOMO11973

Pre Gene Modal

BGIBMGA004378

Annotation

PREDICTED:_clavesin-2-like_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr20(-):4494504-4514139      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.164

CDS

ATGGCCACTTCAGTCCTCCAACCCGAAGATTGCCGAAGAGAACACGAACCAAAGCCAGACATCATCGAATCACCGCGGCTGACTGATGATGAACGCGTACACATTCTGGAAGCGAAGGAACGAGAGACCGGTGAACTGCCGCCTGAGCTTCGGGAAAAAGCCCGGATCGAACTGAGAGAAGATCCAATTTTGAGAGAAGAAGCTTTGAATCAAATGAGACATTTTATAGAGAAGCATCCTGCGATTAAAAAATGCCGTCAAGATGCACCATTCTTGTTGCGTTTCCTGCGTACAAAGAAATACTCAATACCCCAGGCCTGCTCGATGCTGGAACGGTACCTGACCATACGACAAATGTACCCGCAATGGTTCCAGAAACTGGATCCTCTTGACCCGAAGATAGCTGCAGTTATAGACGCCGGGTATCTAGTGCCATTGCCGAAGAGAGACGCCGAGGGGAGAAGAGTGGTTCTGTCCTGTATGGGACGCTTCGATCCTCACTTATACGACAGTTGTGTAATGGCCCGAGTTCATTCAATGATTGTGGAACACCTCCTCGACGAGCCACGCTCCCAACTTCTCGGCTACACTCATGTTAATGACGAAGCCGGCATGCAAATGCCTCACATTAGTCTTTGGTCTCTCACCGATGTCAGGATAATGCTTAATTGCATTCAGAATTCAACACCGATGAGGCACAAGAGGACACATTTTGTGAACATACCGCATTATGGAGTCAGATTTTTCGAATTTGCAGTTTCGTTGTTGAGTGATAAACTGAAAGACCGTGTTATGTTCCATCGTACGAGTAGTGACCTAACAAAATACGTTGACCCTGCCATTTTGCCAAAAGAATATGGCGGTACAGTCCCACTAAAAGATATGATTGAAGAACTGAAACGTAATTTATTGAAGCAAAGAGAGGAGCTACTGGCCTTGGATGACATGTGCATCGATTTGTATGCACTAGAAAAAAATGATTTGACACAAGACATTCATTCAACCGCCGGATCGTTCCGTAAACTTGAATTGGATTAA

Protein

MATSVLQPEDCRREHEPKPDIIESPRLTDDERVHILEAKERETGELPPELREKARIELREDPILREEALNQMRHFIEKHPAIKKCRQDAPFLLRFLRTKKYSIPQACSMLERYLTIRQMYPQWFQKLDPLDPKIAAVIDAGYLVPLPKRDAEGRRVVLSCMGRFDPHLYDSCVMARVHSMIVEHLLDEPRSQLLGYTHVNDEAGMQMPHISLWSLTDVRIMLNCIQNSTPMRHKRTHFVNIPHYGVRFFEFAVSLLSDKLKDRVMFHRTSSDLTKYVDPAILPKEYGGTVPLKDMIEELKRNLLKQREELLALDDMCIDLYALEKNDLTQDIHSTAGSFRKLELD

Uniprot

H9J4D9   A0A2A4JFF1   A0A2W1BQD9   I4DJ17   A0A0S2Z351   A0A2H1WNU3   + More
A0A2H4RMQ0   A0A3S2LDY5   A0A2H4RMT3   A0A212EWJ6   A0A0L7KUX0   B4L080   A0A026X4A6   E2AKP8   A0A0L7RAV0   E9I8F2   A0A1I8P4P8   A0A088AU83   E2BHB2   A0A0N0U5W8   A0A2A3ENT0   A0A1B6FJZ8   B3MB13   K7IMI5   T1PPD2   B4PGR5   A0A1I8N353   A0A1B6JQG9   A0A0C9QEY8   A0A1B0B5J8   A0A310S4U0   A0A1A9Y0T3   A0A1W4UUT4   A0A0M3QWL0   A0A154PP17   A0A1B0AI52   A0A1B0G8G5   A0A1B6LYX5   A0A0L0C613   A0A3B0K409   A0A0Q9WTF0   B4LGN6   A0A195C2P7   W8BNM0   B3NHA8   A0A1A9V3P8   A0A0J7LAZ4   B4HG21   A0A0J9RVF0   Q9VTY1   A0A1J1IDV5   B4GRF4   B5DPD3   B4J322   B4N344   A0A034WGZ8   E0W0G5   A0A3L8DYT5   A0A0A1XFE3   A0A0K8UCP2   A0A195EYP4   F4W5T2   A0A023F2I7   J3JTC8   A0A336M0H0   A0A2P8Z557   A0A139WG06   J3JYV0   A0A2H8TJU0   A0A067QQN5   C4WWS6   J9K7J4   A0A151X2M8   A0A2J7QQQ8   A0A023EPN0   A0A182GWK0   A0A1Q3FMQ4   A0A158P2S1   Q0IET5   A0A2M4BTZ5   B0XBV4   B0X414   A0A2M4BU56   A0A2M3Z4T7   A0A2M3Z4X9   A0A2M3ZH19   A0A195DFG9   A0A1Y1MWL1   W5JFQ5   A0A182IWX1   A0A182NI43   A0A2R7VUT4   A0A182QF89   A0A182FDD8   A0A182PRD7   A0A182M0L7   A0A182I325   A0A182U9N0  

Pubmed

19121390    28756777    22651552    26354079    25684408    29136137    + More
22118469    26227816    17994087    24508170    20798317    21282665    20075255    17550304    25315136    26108605    24495485    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    25348373    20566863    30249741    25830018    21719571    25474469    22516182    29403074    18362917    19820115    24845553    24945155    26483478    21347285    17510324    28004739    20920257    23761445   

EMBL

BABH01022067    NWSH01001732    PCG70304.1    KZ149954    PZC76511.1    AK401285    + More
KQ459460    BAM17907.1    KPJ00786.1    KT943543    ALQ33301.1    ODYU01009970    SOQ54743.1    MG434604    ATY51910.1    RSAL01000030    RVE51670.1    MG434645    ATY51951.1    AGBW02011960    OWR45862.1    JTDY01005572    KOB66871.1    CH933809    EDW18026.2    KK107015    EZA62861.1    GL440368    EFN65988.1    KQ414617    KOC68047.1    GL761538    EFZ23179.1    GL448287    EFN84881.1    KQ435752    KOX76208.1    KZ288203    PBC33463.1    GECZ01019268    JAS50501.1    CH902618    EDV40279.2    KA649878    AFP64507.1    CM000159    EDW94304.2    GECU01006286    JAT01421.1    GBYB01001919    JAG71686.1    JXJN01008760    KQ775154    OAD52285.1    CP012525    ALC44333.1    KQ434977    KZC12920.1    CCAG010000253    GEBQ01011084    JAT28893.1    JRES01000951    KNC26854.1    OUUW01000012    SPP87432.1    CH940647    KRF84415.1    EDW69474.2    KQ978379    KYM94463.1    GAMC01003855    JAC02701.1    CH954178    EDV51565.2    LBMM01000070    KMR05077.1    CH480815    EDW41267.1    CM002912    KMY99239.1    AE014296    AY061455    AAF49914.2    AAL29003.1    CVRI01000047    CRK98400.1    CH479188    EDW40339.1    CH379069    EDY73495.2    CH916366    EDV96093.1    CH964062    EDW78783.2    GAKP01004111    JAC54841.1    DS235858    EEB19121.1    QOIP01000002    RLU25630.1    GBXI01004636    JAD09656.1    GDHF01027882    JAI24432.1    KQ981905    KYN33343.1    GL887695    EGI70408.1    GBBI01002885    JAC15827.1    BT126484    AEE61448.1    UFQS01000388    UFQT01000388    SSX03461.1    SSX23826.1    PYGN01000190    PSN51630.1    KQ971351    KYB26819.1    BT128431    AEE63388.1    GFXV01001743    MBW13548.1    KK853083    KDR11656.1    AK342238    BAH72346.1    ABLF02016643    ABLF02035746    KQ982576    KYQ54653.1    NEVH01012083    PNF30920.1    GAPW01002615    JAC10983.1    JXUM01019964    JXUM01094568    KQ564137    KQ560560    KXJ72702.1    KXJ81891.1    GFDL01006184    JAV28861.1    ADTU01007409    ADTU01007410    ADTU01007411    ADTU01007412    ADTU01007413    CH477478    EAT40266.1    GGFJ01007404    MBW56545.1    DS232655    EDS44483.1    DS232327    EDS40091.1    GGFJ01007403    MBW56544.1    GGFM01002775    MBW23526.1    GGFM01002757    MBW23508.1    GGFM01007071    MBW27822.1    KQ980903    KYN11606.1    GEZM01018847    JAV90013.1    ADMH02001280    ETN63207.1    KK854099    PTY11257.1    AXCN02000392    AXCM01002755    APCN01000195   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000007151    UP000037510    + More
UP000009192    UP000053097    UP000000311    UP000053825    UP000095300    UP000005203    UP000008237    UP000053105    UP000242457    UP000007801    UP000002358    UP000002282    UP000095301    UP000092460    UP000092443    UP000192221    UP000092553    UP000076502    UP000092445    UP000092444    UP000037069    UP000268350    UP000008792    UP000078542    UP000008711    UP000078200    UP000036403    UP000001292    UP000000803    UP000183832    UP000008744    UP000001819    UP000001070    UP000007798    UP000009046    UP000279307    UP000078541    UP000007755    UP000245037    UP000007266    UP000027135    UP000007819    UP000075809    UP000235965    UP000069940    UP000249989    UP000005205    UP000008820    UP000002320    UP000078492    UP000000673    UP000075880    UP000075884    UP000075886    UP000069272    UP000075885    UP000075883    UP000075840    UP000075902   

PRIDE

H9J4D9    Q9VTY1   

Pfam

PF00650   CRAL_TRIO        + More
PF03765   CRAL_TRIO_N
PF00595   PDZ
PF02185   HR1
PF03097   BRO1

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       
IPR004328   BRO1_dom       
IPR036274   HR1_rpt_sf       
IPR001478   PDZ       
IPR038499   BRO1_sf       
IPR011072   HR1_rho-bd       
IPR036034   PDZ_sf       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       
SSF50156   SSF50156       
SSF46585   SSF46585       

Gene 3D

3.40.525.10     1.25.40.280    

CDD

cd00170  SEC14

ProteinModelPortal

H9J4D9   A0A2A4JFF1   A0A2W1BQD9   I4DJ17   A0A0S2Z351   A0A2H1WNU3   + More
A0A2H4RMQ0   A0A3S2LDY5   A0A2H4RMT3   A0A212EWJ6   A0A0L7KUX0   B4L080   A0A026X4A6   E2AKP8   A0A0L7RAV0   E9I8F2   A0A1I8P4P8   A0A088AU83   E2BHB2   A0A0N0U5W8   A0A2A3ENT0   A0A1B6FJZ8   B3MB13   K7IMI5   T1PPD2   B4PGR5   A0A1I8N353   A0A1B6JQG9   A0A0C9QEY8   A0A1B0B5J8   A0A310S4U0   A0A1A9Y0T3   A0A1W4UUT4   A0A0M3QWL0   A0A154PP17   A0A1B0AI52   A0A1B0G8G5   A0A1B6LYX5   A0A0L0C613   A0A3B0K409   A0A0Q9WTF0   B4LGN6   A0A195C2P7   W8BNM0   B3NHA8   A0A1A9V3P8   A0A0J7LAZ4   B4HG21   A0A0J9RVF0   Q9VTY1   A0A1J1IDV5   B4GRF4   B5DPD3   B4J322   B4N344   A0A034WGZ8   E0W0G5   A0A3L8DYT5   A0A0A1XFE3   A0A0K8UCP2   A0A195EYP4   F4W5T2   A0A023F2I7   J3JTC8   A0A336M0H0   A0A2P8Z557   A0A139WG06   J3JYV0   A0A2H8TJU0   A0A067QQN5   C4WWS6   J9K7J4   A0A151X2M8   A0A2J7QQQ8   A0A023EPN0   A0A182GWK0   A0A1Q3FMQ4   A0A158P2S1   Q0IET5   A0A2M4BTZ5   B0XBV4   B0X414   A0A2M4BU56   A0A2M3Z4T7   A0A2M3Z4X9   A0A2M3ZH19   A0A195DFG9   A0A1Y1MWL1   W5JFQ5   A0A182IWX1   A0A182NI43   A0A2R7VUT4   A0A182QF89   A0A182FDD8   A0A182PRD7   A0A182M0L7   A0A182I325   A0A182U9N0  

PDB

3HY5     E-value=4.54837e-26,     Score=292

KEGG

101739669    no KO assigned | (RefSeq) clavesin-2

GO

GO:0007165   GO:0005215   GO:0005622   GO:0006810   GO:0016021   GO:0022857   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Length:

345

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01596

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00891

outside

1  -  345

 

 

Pi

212.622019

Theta

169.756576

Tajima's D

0.998437

CLR

0.278672

CSRT

0.653867306634668

Interpretation

Uncertain