SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11970
Pre Gene Modal
BGIBMGA004487
Annotation
hypothetical_protein_KGM_19881_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.937
 

Sequence

CDS
ATGGGAATAATGAGTTTCGGTCCTGAAAACTGTGGTGATGAACATCAGCCGGCTGTCTTCATCAAAGCATTCTACTTCAGAGATTTTGTCAAACACACGATATCTTCATACAAGACGACAGCAGACCTAATAGAAGCGATGAAGGAGGTTGAACCTGAATTAAACGAAAAGGAGGAATATCCTAAAGACGTCAGAATAAAGCCGCAAGATCTTCCTAACGATATAATCTAA
Protein
MGIMSFGPENCGDEHQPAVFIKAFYFRDFVKHTISSYKTTADLIEAMKEVEPELNEKEEYPKDVRIKPQDLPNDII

Summary

Similarity
Belongs to the peptidase S1 family.
Uniprot
Pfam
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR018114   TRYPSIN_HIS       
SUPFAM
SSF50494   SSF50494       
ProteinModelPortal
PDB
4NFF     E-value=0.00222946,     Score=90

Ontologies

Topology

Length:
76
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00055
Exp number, first 60 AAs:
0.00055
Total prob of N-in:
0.07617
outside
1  -  76
 
 

Population Genetic Test Statistics

Pi
359.233127
Theta
185.323278
Tajima's D
3.23208
CLR
0.093131
CSRT
0.987600619969002
Interpretation
Uncertain
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