Silkworm Genome Informatics Database

Gene

KWMTBOMO11960

Pre Gene Modal

BGIBMGA004380

Annotation

PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(-):4065637-4070286 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.235

CDS

ATGGTCTCTAGTGAAGAAGAACCGGAAACAAAGCAGGACGACGCTTTAAAATGGGACGTAGATATGGAGATACAATTATTTTACGCTATGGCCAACCATAAACCAGTTGGTATAAATAAACACTTCCAAATGGCCTGTATATGGGAGAAATTATCGAATTCAGTTACCAAAGAGATATCAACCCAAGATATATGGAAACACTTAGGCAGTTTATATGATTTTACGATGTTAGACGAAGCCGAACCTATACCGTTTCCCAATCACGAAATTACGTTCTGTTTGCCCGAAAATGAATTTGGCGCCTTAATGAAACAGAAATCGAAGGAGGTTCTGGTTAGTGAAGAAACTGAAGATAAAGATGGACGAAGCCCTTCTCCTAAATCAACTCCGAGAAGCAACTCTAAAGGGACTGCTTCTAAAGACAATATGTCTAAAGGTACTCGGAAGGATAGCATCAGCGCTCTTGCAACGAAAACACGTAAAGAAAGCGGCAGCTCACACGCGTCTACAGATACGCCGAGTATTAAATCTGAAAAAGAATATGATAGGCGAAGAGATTCACGCGATTCGAATGCATCCGGTCCAAGGGACGGTTCGTCCGGCAGAAAGTCTACCTCGCACAAGGATAAAACGCCCAAATCTAAAATCAGCTCTATTGCTGTCTGGGATTCCCCTCAACTAGACGAAGAGACCGTTTCCAGACGAGGACGTCGCCGCGCTAACACATCGACGCCGCCTTCAACGACGCCGGCCAAACGTCGCCGCACTTGA

Protein

MVSSEEEPETKQDDALKWDVDMEIQLFYAMANHKPVGINKHFQMACIWEKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEPIPFPNHEITFCLPENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSSHASTDTPSIKSEKEYDRRRDSRDSNASGPRDGSSGRKSTSHKDKTPKSKISSIAVWDSPQLDEETVSRRGRRRANTSTPPSTTPAKRRRT

Uniprot

A0A2A4JX29 A0A212FAN6 A0A3S2PFL3 A0A2H1W8K2 A0A2W1BGA3 S4Q0A6 + More
A0A194QB88 A0A0N1I9Z3 A0A2A4JYU7 A0A0L7KP06 A0A2R5LK18 A0A154PQE6 A0A1Z5LB91 A0A1Z5L3W4 E9IQH6 V4A9A2

Pubmed

22118469 28756777 23622113 26354079 26227816 28528879 + More
21282665 23254933

EMBL

NWSH01000415 PCG76551.1 AGBW02009448 OWR50790.1 RSAL01000053 RVE50030.1 + More
ODYU01007025 SOQ49398.1 KZ150208 PZC72227.1 GAIX01000123 JAA92437.1 KQ459460 KPJ00691.1 KQ460009 KPJ18472.1 PCG76552.1 JTDY01008009 KOB64801.1 GGLE01005730 MBY09856.1 KQ435037 KZC14123.1 GFJQ02002666 JAW04304.1 GFJQ02004995 JAW01975.1 GL764790 EFZ17194.1 KB200701 ESP00564.1

Proteomes

UP000218220 UP000007151 UP000283053 UP000053268 UP000053240 UP000037510 + More
UP000076502 UP000030746

Pfam

PF07904 Eaf7

Interpro

IPR012423 Eaf7/MRGBP

ProteinModelPortal

A0A2A4JX29 A0A212FAN6 A0A3S2PFL3 A0A2H1W8K2 A0A2W1BGA3 S4Q0A6 + More
A0A194QB88 A0A0N1I9Z3 A0A2A4JYU7 A0A0L7KP06 A0A2R5LK18 A0A154PQE6 A0A1Z5LB91 A0A1Z5L3W4 E9IQH6 V4A9A2

PDB

2N1D E-value=0.000381576, Score=101

KEGG

101738466 K11343 MRG-binding protein | (RefSeq) MRG/MORF4L-binding protein

GO

GO:0006355 GO:0043189 GO:0016740 GO:0005634 GO:0003676 GO:0008138 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

PANTHER

PTHR13581

Length:

256

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00094

Exp number, first 60 AAs:

0.00094

Total prob of N-in:

0.05349

outside

1 - 256

Pi

253.052147

Theta

177.644868

Tajima's D

1.07695

CLR

0

CSRT

0.683365831708415

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics