Gene

KWMTBOMO11959

Pre Gene Modal

BGIBMGA004381

Annotation

PREDICTED:_peroxisome_biogenesis_factor_10_[Amyelois_transitella]

Location

Bomo_Chr20(-):4061216-4062186      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.613

CDS

ATGGCTTTGCCAGTAGCACAACCTGCTGAAGTTCTACGTGCATGGCAAAAAGACGATCAATACGAAAAACAACTGGCCGATTCCATATCTAAACTGTTACCATTACAGCACGGTTCAAAAGCTATTCCAATATCCTCTTTGCTTTATAAATCATTTACAACCTTAAAAGACCTACAGACCCTAGGCGAAGAGTACTCTGGAATCGTCCAAGTAGATGATAGTTACCACAAACTGCCGAGTTACTACGCACGTTTAGCAAGCGTATTATTATCAACTTTTGGTGAAAATCTAACTCGAAGATTTGTAAATCATGTTGGAAAAAAAATTGAAACAAATCGATCACTGAGATCTGAAGCCCAAGATCTCTTTTTGATTGCAGTAAAGACTCTTGGTGATGTTTTGCCACAGATACAAAGTATTCACAGGGCATTATCTTACATCTGCGGAGGACCTTTACAGATAGGTAAAAATCTGACTGGCATTGATTATGTTCATGTTAGACCTGCTGCAACTGCTTCATATGCTCATTTAAATTTACTAGGCTACATAACATTACTGCATGCATTTGTATGCTGTGGACAAAGTGTTTACTTAGCGAAAAAACATTTGGACCAATTAAAAGAAATTCCCAATGAAGTGGATAACGAAAAGACATGTGTTGCATGCTTGGAGGAAATATTACAACCTTGTGTTCTTCAGTGTGGCCATATATTCTGCCATCAATGTTGCTATGGCGCACTAAACAGTTGTGCATTGTGCAGGACACCATTTACAAAGAATACTGTTGTGCCACTAATGAACTATTATCCTGGAGGTTAA

Protein

MALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGSKAIPISSLLYKSFTTLKDLQTLGEEYSGIVQVDDSYHKLPSYYARLASVLLSTFGENLTRRFVNHVGKKIETNRSLRSEAQDLFLIAVKTLGDVLPQIQSIHRALSYICGGPLQIGKNLTGIDYVHVRPAATASYAHLNLLGYITLLHAFVCCGQSVYLAKKHLDQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQCCYGALNSCALCRTPFTKNTVVPLMNYYPGG

Uniprot

H9J4E2   A0A2A4JYQ9   A0A212FAN3   A0A2W1BAZ8   A0A0L7KNW6   A0A2H1W8H4   + More
A0A0N1IGB0   A0A194Q577   A0A1B6DJM2   A0A336MIV3   A0A1J1IVX2   A0A1B0CSJ0   A0A1L8DSP0   A0A1B0D3U7   A0A0P4VQ13   A0A1B6MGH9   A0A069DRF6   A0A2R7WTF4   A0A224XPS7   B4PDA5   A0A0P4WIT5   A0A1I8MMI2   A0A0K8TT86   W8BX14   A0A1B0B8U6   A0A1B0A6W7   A0A1W4W623   A0A1A9URQ3   A0A1A9XB33   A0A0V0G6X4   A0A2M4AWP8   A0A182MIB7   A0A146LKP9   A0A0A9X2V9   A0A0K8THW6   B3NBC5   D3TPT9   U5EZB7   Q9W0D7   A0A0A1WM57   B3M8F1   A0A182TLP5   B4QMG3   A0A182PL40   W5JGW4   A0A182QUP1   A0A182UST9   A0A1I8PK36   B4HVV1   A0A232F8N7   A0A182WRB4   A0A182VT35   A0A182RKB5   K7IXV6   A0A182IDJ4   Q7QI38   A0A3B0KA22   A0A182T164   Q2LZX3   A0A088A4P5   A0A182NVE8   A0A182YQ34   B4LHM3   A0A310SIR6   B4IZJ9   A0A182LAB0   A0A2J7QVN4   A0A067R3D6   B4N2V2   A0A0L7R3C2   B4KWA1   A0A2A3ECF7   A0A154P3S6   A0A2P8Z684   A0A182J4R3   A0A139WMJ2   A0A2H8U1S7   E0VG81   A0A087SVF3   A0A0M8ZU16   A0A182H1E7   F5HIZ6   A0A1B6GG87   G3SYP6   A0A224YVM9   K1R1W6   A0A226E8G7   A0A2Y9E1T5   A0A131XZY1   J9M316   A0A2S2PZU2   A0A2S2PFY2   A0A182FK46   E2ATT3  

Pubmed

19121390    22118469    28756777    26227816    26354079    27129103    + More
26334808    17994087    17550304    25315136    26369729    24495485    26823975    25401762    20353571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    22936249    20920257    23761445    28648823    20075255    12364791    14747013    17210077    15632085    25244985    20966253    24845553    29403074    18362917    19820115    20566863    26483478    28797301    22992520    20798317   

EMBL

BABH01022022    NWSH01000415    PCG76550.1    AGBW02009448    OWR50788.1    KZ150208    + More
PZC72228.1    JTDY01008009    KOB64800.1    ODYU01007025    SOQ49399.1    KQ460009    KPJ18470.1    KQ459460    KPJ00693.1    GEDC01011441    JAS25857.1    UFQT01000635    SSX25978.1    CVRI01000063    CRL04357.1    AJWK01026143    GFDF01004588    JAV09496.1    AJVK01023707    GDKW01001500    JAI55095.1    GEBQ01004972    JAT35005.1    GBGD01002409    JAC86480.1    KK855501    PTY22846.1    GFTR01004588    JAW11838.1    CM000159    EDW92853.1    GDRN01043000    JAI67005.1    GDAI01000478    JAI17125.1    GAMC01012811    JAB93744.1    JXJN01010060    GECL01002419    JAP03705.1    GGFK01011879    MBW45200.1    AXCM01003211    GDHC01011302    JAQ07327.1    GBHO01029276    GBHO01029275    GBHO01029274    JAG14328.1    JAG14329.1    JAG14330.1    GBRD01000638    JAG65183.1    CH954178    EDV50178.1    CCAG010023157    EZ423441    ADD19717.1    GANO01001082    JAB58789.1    AE014296    AY069290    AAF47512.1    AAL39435.1    AGB93960.1    GBXI01014370    JAC99921.1    CH902618    EDV38886.1    CM000363    CM002912    EDX08820.1    KMY96863.1    ADMH02001566    ETN62049.1    AXCN02002011    CH480817    EDW50066.1    NNAY01000686    OXU26972.1    APCN01004705    AAAB01008811    EAA04957.3    OUUW01000009    SPP84970.1    CH379069    EAL31164.3    CH940647    EDW69576.1    KQ760801    OAD58987.1    CH916366    EDV97774.1    NEVH01009776    PNF32643.1    KK852726    KDR17652.1    CH964062    EDW78691.1    KQ414663    KOC65276.1    CH933809    EDW18508.1    KZ288295    PBC28972.1    KQ434803    KZC05888.1    PYGN01000176    PSN52013.1    AXCP01007142    KQ971312    KYB29057.1    GFXV01007603    MBW19408.1    DS235132    EEB12387.1    KK112143    KFM56842.1    KQ435885    KOX69613.1    JXUM01022982    KQ560646    KXJ81457.1    EGK96257.1    GECZ01008446    JAS61323.1    GFPF01010502    MAA21648.1    JH816958    EKC27741.1    LNIX01000006    OXA53151.1    GEFM01004021    JAP71775.1    ABLF02026136    GGMS01001842    MBY71045.1    GGMR01015742    MBY28361.1    GL442691    EFN63166.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    + More
UP000183832    UP000092461    UP000092462    UP000002282    UP000095301    UP000092460    UP000092445    UP000192221    UP000078200    UP000092443    UP000075883    UP000008711    UP000092444    UP000000803    UP000007801    UP000075902    UP000000304    UP000075885    UP000000673    UP000075886    UP000075903    UP000095300    UP000001292    UP000215335    UP000076407    UP000075920    UP000075900    UP000002358    UP000075840    UP000007062    UP000268350    UP000075901    UP000001819    UP000005203    UP000075884    UP000076408    UP000008792    UP000001070    UP000075882    UP000235965    UP000027135    UP000007798    UP000053825    UP000009192    UP000242457    UP000076502    UP000245037    UP000075880    UP000007266    UP000009046    UP000054359    UP000053105    UP000069940    UP000249989    UP000007646    UP000005408    UP000198287    UP000248480    UP000007819    UP000069272    UP000000311   

PRIDE

H9J4E2   

Pfam

PF04757   Pex2_Pex12        + More
PF13639   zf-RING_2
PF10147   CR6_interact
PF00226   DnaJ

Interpro

IPR001841   Znf_RING        + More
IPR006845   Pex_N       
IPR013083   Znf_RING/FYVE/PHD       
IPR017907   Znf_RING_CS       
IPR018472   Damage-induce-interacting_prot       
IPR001623   DnaJ_domain       
IPR036869   J_dom_sf       

SUPFAM

SSF46565   SSF46565       

Gene 3D

3.30.40.10     1.10.287.110    

CDD

cd06257  DnaJ

ProteinModelPortal

H9J4E2   A0A2A4JYQ9   A0A212FAN3   A0A2W1BAZ8   A0A0L7KNW6   A0A2H1W8H4   + More
A0A0N1IGB0   A0A194Q577   A0A1B6DJM2   A0A336MIV3   A0A1J1IVX2   A0A1B0CSJ0   A0A1L8DSP0   A0A1B0D3U7   A0A0P4VQ13   A0A1B6MGH9   A0A069DRF6   A0A2R7WTF4   A0A224XPS7   B4PDA5   A0A0P4WIT5   A0A1I8MMI2   A0A0K8TT86   W8BX14   A0A1B0B8U6   A0A1B0A6W7   A0A1W4W623   A0A1A9URQ3   A0A1A9XB33   A0A0V0G6X4   A0A2M4AWP8   A0A182MIB7   A0A146LKP9   A0A0A9X2V9   A0A0K8THW6   B3NBC5   D3TPT9   U5EZB7   Q9W0D7   A0A0A1WM57   B3M8F1   A0A182TLP5   B4QMG3   A0A182PL40   W5JGW4   A0A182QUP1   A0A182UST9   A0A1I8PK36   B4HVV1   A0A232F8N7   A0A182WRB4   A0A182VT35   A0A182RKB5   K7IXV6   A0A182IDJ4   Q7QI38   A0A3B0KA22   A0A182T164   Q2LZX3   A0A088A4P5   A0A182NVE8   A0A182YQ34   B4LHM3   A0A310SIR6   B4IZJ9   A0A182LAB0   A0A2J7QVN4   A0A067R3D6   B4N2V2   A0A0L7R3C2   B4KWA1   A0A2A3ECF7   A0A154P3S6   A0A2P8Z684   A0A182J4R3   A0A139WMJ2   A0A2H8U1S7   E0VG81   A0A087SVF3   A0A0M8ZU16   A0A182H1E7   F5HIZ6   A0A1B6GG87   G3SYP6   A0A224YVM9   K1R1W6   A0A226E8G7   A0A2Y9E1T5   A0A131XZY1   J9M316   A0A2S2PZU2   A0A2S2PFY2   A0A182FK46   E2ATT3  

PDB

5DIN     E-value=4.23734e-05,     Score=110

KEGG

101738327    K13346 peroxin-10 | (RefSeq) peroxisome biogenesis factor 10

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0008270   GO:0005779   GO:0016558   GO:0016874   GO:0007285   GO:0048137   GO:0007112   GO:0007286   GO:0042760   GO:0007031   GO:0005777   GO:0016567   GO:0004842   GO:0005778   GO:0005634   GO:0005515   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Length:

272

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.89309

Exp number, first 60 AAs:

0.00116

Total prob of N-in:

0.07374

outside

1  -  272

 

 

Pi

271.695293

Theta

208.910771

Tajima's D

1.114881

CLR

0.043318

CSRT

0.690615469226539

Interpretation

Uncertain