SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11958  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004331
Annotation
FK506-binding_protein_[Bombyx_mori]
Full name
Peptidylprolyl isomerase      
Location in the cell
Cytoplasmic   Reliability : 2.517
 

Sequence

CDS
ATGGGAGTCGACGTGGAAACTATTTCACCTGGAAATGGATCAACTTACCCAAAACCGGGCCAAACTGTAGTCGTTCACTACACTGGAACGTTACAAAACGGAAAGAAATTCGATTCATCTCGAGATAGAGGGCAACCTTTTAAATTCACATTAGGCAAAGGTGATGTCATTAAAGGATGGGATCAAGGATTAGCAAAGATGTCTGTAGGGGAAAGAGCGAAATTGACGTGCTCTCCTGACTTTGCCTATGGTTCCAGAGGTCACCCAGGTGTAATACCACCAAACGCTACTCTCATTTTTGACGTTGAACTCTTACGTGTTGAATAA
Protein
MGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE

Summary

Catalytic Activity
[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)
Feature
chain  Peptidylprolyl isomerase
EC Number
5.2.1.8
EMBL
DQ443423    ABF51512.1    KQ460009    KPJ18471.1    KQ459460    KPJ00692.1    + More
KC481240    AGK45316.1    GAIX01000169    JAA92391.1    AGBW02009448    OWR50789.1    JTDY01008009    KOB64799.1    NWSH01000415    PCG76549.1    ODYU01007025    SOQ49400.1    KZ150208    PZC72229.1    KZ288293    PBC28990.1    JR049571    AEY61004.1    KM923785    AJG43844.1    KZ150194    PZC72356.1    GBRD01002582    JAG63239.1    GL732658    EFX68309.1    NWSH01008741    PCG62431.1    ODYU01003437    SOQ42212.1    ADTU01009691    KC481239    AGK45315.1    EF077224    ABK15648.1    KQ461181    KPJ07655.1    AK401535    BAM18157.1    KPJ00825.1    GDIP01100803    GDIQ01037475    JAM02912.1    JAN57262.1    GAIX01005938    JAA86622.1    DQ673431    ABG82004.1    GDKW01002230    JAI54365.1    GECL01002975    JAP03149.1    GAHY01000974    JAA76536.1    GEDC01024754    GEDC01009146    JAS12544.1    JAS28152.1    BABH01032597    DQ443197    ABF51286.1    GALX01001349    JAB67117.1    GBBI01000576    JAC18136.1    GBGD01003565    JAC85324.1    GEMB01001474    GEMB01001473    JAS01683.1    RSAL01000029    RVE51807.1    GEBQ01022543    JAT17434.1    GBHO01011079    GBRD01002950    GDHC01011564    JAG32525.1    JAG62871.1    JAQ07065.1    AGBW02013852    OWR42653.1    GFTR01001768    JAW14658.1    GBYB01008200    GBYB01009083    JAG77967.1    JAG78850.1    KQ971354    EFA06853.1    GECZ01030680    JAS39089.1    JN546016    AFN85815.1    EF070605    ABM55671.1    GECZ01027015    JAS42754.1    GECU01030441    JAS77265.1    GDIP01234754    JAI88647.1    AF117595    AAF16717.1    GL888441    EGI60764.1    AJ634777    CAG25527.1    AJ278329    CAC38784.1    GGLE01003128    MBY07254.1    LNIX01000001    OXA63953.1    GL436038    EFN72364.1    GDJX01006564    JAT61372.1    CAEY01001893    BC041748    AAH41748.1    GEZM01092425    JAV56561.1    MNPL01009540    OQR73660.1    GFWV01010330    MAA35059.1    GFJQ02001038    JAW05932.1    GFDF01004144    JAV09940.1    GFAH01000238    JAV48151.1    GBZX01002775    JAG89965.1    BC084619    BC086462    AAH84619.1    AAH86462.1    KK112716    KFM58382.1    BC135491    AAI35492.1    GU075991    ACY92520.1    AMGL01077804    LJIJ01000029    ODN05147.1    BT075719    ACO10143.1    GEFH01004797    JAP63784.1    GEIB01001034    JAR87038.1    GFPF01007808    MAA18954.1    GEDV01011267    JAP77290.1    GACK01008719    JAA56315.1    BC111660    AAI11661.1    AJWK01011545    GANO01001136    JAB58735.1    CT737131    BC059682    AAH59682.1    GAMC01000262    JAC06294.1    LJIG01009607    KRT82741.1    GDHF01017119    JAI35195.1    GAKP01003038    JAC55914.1    GBXI01014194    JAD00098.1    GU588464    ADO28420.1    GU588804    ADO28758.1    AHAT01027735    AHAT01027736    AHAT01027737    AYCK01011472   
Pfam
PF00254   FKBP_C
Interpro
IPR023566   PPIase_FKBP        + More
IPR001179   PPIase_FKBP_dom       
PDB
5L1D     E-value=4.38892e-43,     Score=432

Ontologies

Topology

Length:
108
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00244
Exp number, first 60 AAs:
0.00071
Total prob of N-in:
0.11465
outside
1  -  108
 
 

Population Genetic Test Statistics

Pi
156.931908
Theta
148.938993
Tajima's D
0.168694
CLR
0.034976
CSRT
0.418429078546073
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 LTCSPDFAYGSR 100.00 0.003
28556443 HLQLAIR 100.00 0.003
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