Gene

KWMTBOMO11955

Pre Gene Modal

BGIBMGA014171

Annotation

PREDICTED:_microvitellogenin-like_[Bombyx_mori]

Location

Bomo_Chr20(+):4021267-4025028      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-6      

Location in the cell

Extracellular   Reliability : 1.974

CDS

ATGGCGTTCAAGCATTTAGCAGTGTTATTGACGTGCATGTTGGCCGCTGCAGCTAATGCCGTCCCCGGCGCAGTTGAAAGCACAACGACCCCAAGCGTTGACAGCTCTACCAATGAACTTCCTGAATCCCTGACGACCCCAAGCGCTGACAACTCTACCATTGAACTGTCTGAGCCCCAGTTTGCTTCAACCTATGAAATGACCCATGACCTCTACAATCTCGTTGCTTACGAAAGCTACGACCTAGCGGCTTCCCGAGCCTTAGACCTTATGCGTAATAATCGACCCGATGTCATTAAATCAGCTGTCGACTTGTTAATTGAACACAAAAGAACATTTATTGCCCCTTTCGCATACAAACTGGGGGCTGCTGGAGGCGAATATATTGTAAGGTCCCAGTTTCCCACGGCGTACAAAATGGTACTAAAGGATAATTTTTTTAAATTAATCAACTACCAGGATCGTTGTTCCTTTGAGTTAGGTCCAACTCCAGACTTTGCCAATGACAAAAGGCTCTACGGCAACAACGATCATCCGCATAGCCAGAATTACCATTGGAAGCTCGAGGCCGTCGAGGACGGTGGCAAGATTTATTTCAAGATACGTCACCGCCTAGAACATAGGTACTTGAAGCTGGGCAACTCCATGGATCGCGACGGCGACTATCAAGCGTATGCTTCTGAAAACTCAGACTCGAACAGGCACCTGTGGTCGTTCCAGCCTGTGATGTACAACGGGGAACTCTTATTCTTCGTTATTAATCGTGCGCATTTCCAAGCGCTGAAGCTCGGCCGAGGCGTATATCACGGTAATCGCAACCTTTTCGGCCAAGGTGGAAACTTTGCCAACCACCCTGAACTTTACGGCTGGACCATCAAAGCTTTCGGAGACAGTTCCAATTTTGTAATTATCAGGGACTAG

Protein

MAFKHLAVLLTCMLAAAANAVPGAVESTTTPSVDSSTNELPESLTTPSADNSTIELSEPQFASTYEMTHDLYNLVAYESYDLAASRALDLMRNNRPDVIKSAVDLLIEHKRTFIAPFAYKLGAAGGEYIVRSQFPTAYKMVLKDNFFKLINYQDRCSFELGPTPDFANDKRLYGNNDHPHSQNYHWKLEAVEDGGKIYFKIRHRLEHRYLKLGNSMDRDGDYQAYASENSDSNRHLWSFQPVMYNGELLFFVINRAHFQALKLGRGVYHGNRNLFGQGGNFANHPELYGWTIKAFGDSSNFVIIRD

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   Secreted   3D-structure  

Feature

chain  Microvitellogenin

Uniprot

H9JXA6   H9J4N6   H9B459   H9JVX1   Q0VJU3   P19616   + More
H9J4N4   H9J4E6   H9J4N1   H9J4E8   H9B453   H9J4N3   H9J4M3   H9J4M4   Q05432   H9J4M7   H9J4N5   H9J4M5   H9JX32   H9J4F5   H9J4G3   Q00801   H9J4M8   H9B458   A7LIK7   P09338   A0A0B5Z504   P09335   H9JX33   H9B444   H9J4L6   H9J4L1   H9J4E7   D4QGB9   H9J4F6   Q00802   C7A8A3   Q6Q0S8   Q75RW3   H9J4G5   H9B440   H9J4F9   P09336   E5EVW2   D4QGC0   H9B436   H9B437   H9J4G1   H9J4G0   H9B443   P09334   Q17185   C7A8A2   H9B445   H9J4G4   H9B450   H9J4L5   H9B447   H9B449   H9JMX4   H9JJC0   H9B454   H9B451   Q2PQU4   E5EVW3   H9B448   A0A385HW64   H9B455   H9JJ72   H9B460   B5BSX5   Q76IB6   H9JF68   A0A2W1BZD4   A0A3G1LBE0   A0A2W1BPF5   A0A2A4K904   A0A2W1BV38   A0A2A4JTT3   A0A3G1LBD4   A0A2H1WST8   A0A2A4IYY5   H9B457  

Pubmed

19121390    26078299    2583514    2454229    1343778    1883839    + More
25379889    3342240    26126120    21457781    21514389    22948915    2002509    17112968    18840462    12871935    28756777    29175381   

EMBL

BABH01035696    BABH01022014    JN977544    AFC87824.1    BABH01040631    AM293331    + More
CAL25136.1    M28820    J03768    BABH01022005    BABH01022007    BABH01022003    BABH01022004    JN977538    AFC87818.1    BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021999    BABH01022000    BABH01022013    BABH01021998    JN977527    AFC87807.1    BABH01043627    BABH01021941    JN977524    AFC87804.1    BABH01021929    X54734    JN977543    AFC87823.1    EU024295    ABS71120.1    X07556    KM926620    AJI02615.1    X07553    BABH01043629    JN977529    AFC87809.1    BABH01021930    BABH01021908    BABH01022006    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    X54736    FJ214661    ACO35751.1    AY568957    AAS75435.1    AB158646    BAD07027.1    BABH01021921    JN977525    AFC87805.1    BABH01021935    X07554    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AB553284    BAJ04788.1    JN977521    AFC87801.1    JN977522    AFC87802.1    BABH01021931    BABH01021932    BABH01021933    BABH01021934    JN977528    AFC87808.1    X07552    X54735    CAA38532.1    FJ214660    ACO35750.1    BABH01028979    JN977530    AFC87810.1    BABH01021925    JN977523    AFC87803.1    JN977535    AFC87815.1    BABH01026781    JN977532    AFC87812.1    JN977534    AFC87814.1    BABH01028980    BABH01036437    JN977541    AFC87821.1    JN977539    AFC87819.1    JN977536    AFC87816.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    HM012807    ADQ89806.1    JN977533    AFC87813.1    MG799571    AXY55009.1    JN977540    AFC87820.1    JN977545    AFC87825.1    AB436163    BAG70410.1    AB098260    BAC82630.1    BABH01026782    JN977537    AFC87817.1    KZ149893    PZC78944.1    MF497270    AUB45122.1    KZ149940    PZC76929.1    NWSH01000017    PCG80765.1    PZC78918.1    NWSH01000685    PCG74802.1    MF497269    AUB45121.1    ODYU01010790    SOQ56108.1    NWSH01005147    PCG64400.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000218220   

PRIDE

H9JXA6    H9J4N6    H9B459    H9J4N4    H9J4E6    H9J4N1    + More
H9J4E8    H9B453    H9J4N3    H9J4M3    H9J4M4    Q05432    H9J4M7    H9J4N5    H9J4M5    H9JX32    H9J4F5    H9J4G3    Q00801    H9J4M8    H9B458    A7LIK7    P09338    P09335    H9JX33    H9B444    H9J4L6    H9J4L1    H9J4E7    D4QGB9    H9J4F6    Q00802    C7A8A3    Q6Q0S8    Q75RW3    H9J4G5    H9B440    H9J4F9    P09336    E5EVW2    D4QGC0    H9B436    H9B437    H9J4G1    H9J4G0    P09334    Q17185    C7A8A2    H9B445    H9J4G4    H9B450    H9J4L5    H9B447    H9B449    H9JMX4    H9JJC0    H9B454    H9B451    Q2PQU4    E5EVW3    H9B448    H9B455    H9JJ72    H9B460    B5BSX5    H9JF68    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9JXA6   H9J4N6   H9B459   H9JVX1   Q0VJU3   P19616   + More
H9J4N4   H9J4E6   H9J4N1   H9J4E8   H9B453   H9J4N3   H9J4M3   H9J4M4   Q05432   H9J4M7   H9J4N5   H9J4M5   H9JX32   H9J4F5   H9J4G3   Q00801   H9J4M8   H9B458   A7LIK7   P09338   A0A0B5Z504   P09335   H9JX33   H9B444   H9J4L6   H9J4L1   H9J4E7   D4QGB9   H9J4F6   Q00802   C7A8A3   Q6Q0S8   Q75RW3   H9J4G5   H9B440   H9J4F9   P09336   E5EVW2   D4QGC0   H9B436   H9B437   H9J4G1   H9J4G0   H9B443   P09334   Q17185   C7A8A2   H9B445   H9J4G4   H9B450   H9J4L5   H9B447   H9B449   H9JMX4   H9JJC0   H9B454   H9B451   Q2PQU4   E5EVW3   H9B448   A0A385HW64   H9B455   H9JJ72   H9B460   B5BSX5   Q76IB6   H9JF68   A0A2W1BZD4   A0A3G1LBE0   A0A2W1BPF5   A0A2A4K904   A0A2W1BV38   A0A2A4JTT3   A0A3G1LBD4   A0A2H1WST8   A0A2A4IYY5   H9B457  

PDB

4IY9     E-value=1.19389e-29,     Score=322

KEGG

101746287    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0006508   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 20,         Likelihood:  0.995854

 

 

Length:

306

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.88234

Exp number, first 60 AAs:

0.80746

Total prob of N-in:

0.04361

outside

1  -  306

 

 

Pi

295.607421

Theta

158.340007

Tajima's D

2.611528

CLR

0.199032

CSRT

0.955452227388631

Interpretation

Uncertain