Silkworm Genome Informatics Database

Gene

KWMTBOMO11952

Annotation

PREDICTED:_uncharacterized_protein_LOC106720812_[Papilio_machaon]

Location

Bomo_Chr20(-):3977250-3983196 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.971

CDS

ATGCCGACAAACCCTGCGACTAGTACTGGTGTGCAAGTTAATATTATACAACCTAGTACTTCCCAACATGTAGACAGCATTTCTCCGAGTGAGACGTCTAAGTCAAAATCATCACGCTCGTCATCCACAATTAAGGCTCAAAAGGCCGCCGTAGAGGCCCTCGCCCTGCGCCGACGTCTTGAGCACGAGCAGGAGCTGGCTGAACGTGAGAGGCAACGTGAAAGTCGACTGGCAGCACTCCGTCAGCAGGTAGAGGAGGGCGAACTGAAGGCCGAACTTGCCGCTCTCGACGCGGAAGCCGCGGCAAGTCACAGCAGTCGCAGTGGTTCTGCCAGGGTAAGCGTAGAAAGAACAGAAAGATGGGTACAAAGTTTAGGACAGCCAGTTTGCGTTGGCGAAAATACAGTTAATAGAGGCATCCCCGCAGTAGGGCGAGAGCAAGTAGTTTTTCCGCCTCCCGGCCACCAGGCACCTCTGCCGGCCACTGGGTCAACTGCATCCCCTGTTAACCGTTTTGTTCATCAGAAACAACTTTTAAACGTCACTAAAGCGTCCGAGGCGGCCGTACTTACGCGACCGCTCATTTCCACGGAGGTTGATCAGAGTAGTCTGCTTCAGGCTGTTGCTGACACTGCAGCTGCGGCCAAGGCGCTTGCTACTTCGCACCGTCATAAACATAAGATCGAATTGTTTCCTTTCGACGGAGATGCCTTAACATGGCTACATTTTAAACGTATTTTTGATTTAACCAAAAACAATTTTTCAAATATTGAAAATATTAGTCGGTTACAAAATGCACTTCGCGGCGCGGCCCGAGATGCAGTCGCGTCACTGTTGCTGGCTACAGACAACCCGAACGATATTATAAGAGCTCTGGAGGAGAACTTCGCTCGCCCGGAAATTATAGTATTTAAGGAAGTCTCCGCTCTTAAAAATCTACCACGTTTGGGAAATGACCTGAAAGAGTTAATTACGATAACGAATAAGGTACGTAATTCTATATCTTCTTTTAAAATACTGAATCAAATTGAGTACTTGCATTCTCCAGAACTATTTCACGCCGTCTTAGAAAAATTAAACCCGGTTACTAAAGTAAGATGGACGGACTTTGCTATGCAAGATACTACAGGGCGTCCTAAATTAGAAATTATGTCCGATTTTTTGAGGCGCGAGTTAGATCAACTTATTCGGTTCGGTTTATCACCGGAATCTTGCTCGATCCAACATTCACCACAAAACACTCATCTAAACAAACCGTATAAACGGGAAAATATTCACATAGTTACACACTCTAAACTAAATTCTAAGGCGGCGTCTACACAAAAGCTTGAATGCGCGTTTTGCAAAAAAGATCACAATATTAAGTCATGTTCTGACTTCAAAGCCTTATCTGTTGATGAAAGGTGGGTCTGGCTGCGTGAGGTAAAAGCGTGTTATAGATGTCTTAGGCGTAGTTCACATCAGTGGAAAACATGTAAAGTTAACCCTTGTGGTGTTGATGGGTGTCTAATACGTCATCACCCGTTAATGCATGGTAAAGAACCTGTCTCTTCTGTCAATACTATGTTCGACACGCAATCCACCGAAAATGATCATACGACTAAGCACCACGAACCTGCATCTGTCGAAAAGGTAATAGTTTCTACCACTTCTACAGGTGTTCAAGAACCCAGCTTATCTCTGTGCCCACGTGTATTTCTGAAAATCTTACCCGTTACTGTCTCTGGTCCCTCAGGAAGTTGCAATGTTTACGCACTTCTCGATGACGGAAGCACTGCTACGCTCATTGACTCAAGTATTGCTACCCAAATCGGTGCGACAGGGCCTCACCAGAAAATAACGGTTAATGGTATAGGCGGTCTCAGTAGAAACGCTACGATATCGTATGTAGATTTTCACATTAAGGGTAGGCACACACGAGACACATTTTTAGTGAAAAATGCGAGAGCTATGGAGTCTTTGTCTCTGCGTCCTCAAACGATTAGGCAGGAAACTATTGCTTCTTTCGCACATTTAGCGAATTTACCTTGCAACGTAACTTATGAAGATGCTACACCAACAGTTTTAATTGGTGCAGAGCATTGGCATTTGTCAATCAGCAGCGAGGTACGGTGTGGTGGTAAGAATGAACCCGTTGCCTGTTTAACTGCCTTAGGCTGGGTGCTTTATGGAATCGCGTCCAGTAAAACTAAATCAGTGGAGATTGTTAATCACGGTGTGTGTATCGAACCTTCCGATGAGGAGAAATTAGACTCTTTTATTAGGGAACAATACAAAATTGATTCGTTAGGTATTTCTAAAAAAGAAACTCTACATTCTAAGTCAGATAAACGTGCAGTCGAGATTTTAGAAAAAACTGCTAGACGTCTCCCCACTTCTGATCGATTTGAGGTGGGTTTGCCATGGCGTGACGATATACAACGCATTCCCGACAGCTACCCTCAAGCCATGTCACGATTTTTAAGTCTAGAAAGGCGCATGGCTAAAGATGCTGACTTTGCAAAAGCATATGACGTGTTCATTTCAAACATGATCGCTAAAGGCTATGCAGAAGAATGTGCTCCCGAGTCATACTACGCCAACCACATTAAAGATAAACAATCTTCTTTTTTGAGGCTCTATTTACCCCATTTTGGCGTGTATCACCCTCAGAAACGTAAGCTTCGTGTAGTTCACGACGCCGCAGCCACGAATGCGGGCGTCAGCCTAAACTCTTTGTTGCTACCTGGTCCAGACCTGCTTCAGTCCTTGTTAGGTATTTTACTTCGGTTTCGCGAGGGCCGTATTGCTCTCACTGCTGATATCCGGGAAATGTTCCCTCAAGTAAGGATCAGAGAGCAAGATAGGGACGCCCTCCGGTTTCTCTGGAGGTCAAGCAGAGACCAACCTATAAAGGAGTTTAGGATGACAGCCATCATTTTCGGTGCGTGCTGCAGTCCATTTATAGCGCAATTTATTAAAAATAAAAACGCTCGTGAGCACGCAAGTTTATTTCCTAAAGCAGCTCATGCTATTTTGTACAATCATTATATGGACGATTATATTGACTCTCTCGATGACATTCAAGAGGCAGCACAACTGGCGGCAGATATTGTTGCCGTTCACAATGATGCCTACTTCGAGATGCGGGGCTGGATTTCCAACGATCCATCAGCGCTAAAATTTATTCCTGCTGATCTTAGGGCCACTCAACCGTCGTTGGAAATCAACCTTGGCAGCTGCTCTGCAAACAATATTAGAGCGTTGGGAGTCGAGAGCTTTTCCATAGAATTTCTTCATATCCTGAACTCGAAGCCTATTCCTCCGAACAGTCGTCTCAGAAAACTGTCACCCGCTTTGGGAGAGGACAAATTACTGCGGTTAGCCGGAAGAATTAAAGGCGCAGAAGGCATTGACCCTGACACACGCTTCCCCATCCTTCTTGACGGTCGTCACCCAATTACCTTACCTACTGCCTTGAACGATCACGATTTGGTCAGCCGTACCGAATGGAGGAAAGCATTGAGGCTAGCGGATCATTTTTGGTCGCGTTGGATGCGCGAGGTTCTCCCGACCCTACAACCACGTGAGCAGTCAAGAGGCAACCGCAGTTCAACAGCTTTTCAAGAGGGTGACGTAGTAATTATTGCTGACTTCAACTTGCCCCGCGGAATATGGCCACGAGGACGTGTTGCGAAAGTGTACCCTGGGAAAGATGGCGTGATAAGGGTAGTGGACGTTGCAACAGCAGGGGAATGCTACGCCGACCCGTACGAAAGCTGGTTAGGCTCTCCACCTAAGGCCTTGACTGACCTTGGTTTGCATAACCAGTTTGTGCTTTTCTGCACGAGGGGGAGGATGTTGTGA

Protein

MPTNPATSTGVQVNIIQPSTSQHVDSISPSETSKSKSSRSSSTIKAQKAAVEALALRRRLEHEQELAERERQRESRLAALRQQVEEGELKAELAALDAEAAASHSSRSGSARVSVERTERWVQSLGQPVCVGENTVNRGIPAVGREQVVFPPPGHQAPLPATGSTASPVNRFVHQKQLLNVTKASEAAVLTRPLISTEVDQSSLLQAVADTAAAAKALATSHRHKHKIELFPFDGDALTWLHFKRIFDLTKNNFSNIENISRLQNALRGAARDAVASLLLATDNPNDIIRALEENFARPEIIVFKEVSALKNLPRLGNDLKELITITNKVRNSISSFKILNQIEYLHSPELFHAVLEKLNPVTKVRWTDFAMQDTTGRPKLEIMSDFLRRELDQLIRFGLSPESCSIQHSPQNTHLNKPYKRENIHIVTHSKLNSKAASTQKLECAFCKKDHNIKSCSDFKALSVDERWVWLREVKACYRCLRRSSHQWKTCKVNPCGVDGCLIRHHPLMHGKEPVSSVNTMFDTQSTENDHTTKHHEPASVEKVIVSTTSTGVQEPSLSLCPRVFLKILPVTVSGPSGSCNVYALLDDGSTATLIDSSIATQIGATGPHQKITVNGIGGLSRNATISYVDFHIKGRHTRDTFLVKNARAMESLSLRPQTIRQETIASFAHLANLPCNVTYEDATPTVLIGAEHWHLSISSEVRCGGKNEPVACLTALGWVLYGIASSKTKSVEIVNHGVCIEPSDEEKLDSFIREQYKIDSLGISKKETLHSKSDKRAVEILEKTARRLPTSDRFEVGLPWRDDIQRIPDSYPQAMSRFLSLERRMAKDADFAKAYDVFISNMIAKGYAEECAPESYYANHIKDKQSSFLRLYLPHFGVYHPQKRKLRVVHDAAATNAGVSLNSLLLPGPDLLQSLLGILLRFREGRIALTADIREMFPQVRIREQDRDALRFLWRSSRDQPIKEFRMTAIIFGACCSPFIAQFIKNKNAREHASLFPKAAHAILYNHYMDDYIDSLDDIQEAAQLAADIVAVHNDAYFEMRGWISNDPSALKFIPADLRATQPSLEINLGSCSANNIRALGVESFSIEFLHILNSKPIPPNSRLRKLSPALGEDKLLRLAGRIKGAEGIDPDTRFPILLDGRHPITLPTALNDHDLVSRTEWRKALRLADHFWSRWMREVLPTLQPREQSRGNRSSTAFQEGDVVIIADFNLPRGIWPRGRVAKVYPGKDGVIRVVDVATAGECYADPYESWLGSPPKALTDLGLHNQFVLFCTRGRML

Uniprot

Q2MGA5 A0A226DH22 A0A226DM06 A0A226EDU9 A0A226D351 A0A085N087 + More

Pubmed

24929829

EMBL

AF530470 AAQ09229.1 LNIX01000019 OXA44855.1 LNIX01000015 OXA46575.1 + More
LNIX01000004 OXA55408.1 LNIX01000039 OXA39294.1 KL367585 KFD62883.1

Proteomes

UP000198287

Pfam

PF03564   DUF1759        + More
PF05380   Peptidase_A17
PF00665   rve
PF18701   DUF5641
PF01565   FAD_binding_4
PF17921   Integrase_H2C2
PF09129   Chol_subst-bind
PF05585   DUF1758

Interpro

IPR040676   DUF5641        + More
IPR036397   RNaseH_sf
IPR005312   DUF1759
IPR001584   Integrase_cat-core
IPR008042   Retrotrans_Pao
IPR012337   RNaseH-like_sf
IPR001878   Znf_CCHC
IPR006094   Oxid_FAD_bind_N
IPR016166   FAD-bd_PCMH
IPR016164   FAD-linked_Oxase-like_C
IPR041588   Integrase_H2C2
IPR016170   Cytok_DH_C_sf
IPR015213   Cholesterol_OX_subst-bd
IPR036318   FAD-bd_PCMH-like_sf
IPR016169   FAD-bd_PCMH_sub2
IPR016167   FAD-bd_PCMH_sub1
IPR008737   Peptidase_asp_put

SUPFAM

SSF53098   SSF53098        + More
SSF56176   SSF56176
SSF55103   SSF55103

Gene 3D

3.30.420.10 3.30.43.10 3.30.465.10 3.40.462.10

ProteinModelPortal

Q2MGA5 A0A226DH22 A0A226DM06 A0A226EDU9 A0A226D351 A0A085N087 + More

KEGG

101735462 no KO assigned | (RefSeq) uncharacterized LOC101735462

GO

GO:0015074 GO:0003676 GO:0008270 GO:0071949 GO:0016491 GO:0004190 GO:0006508 GO:0008236 GO:0008138 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

Length:

1281

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0971399999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1281

Pi

358.281662

Theta

178.988434

Tajima's D

3.414208

CLR

0.020475

CSRT

0.990900454977251

Interpretation

Possibly Balancing Selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree