Gene

KWMTBOMO11951  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004476

Annotation

microvitellogenin-like_precursor_[Bombyx_mori]

Location

Bomo_Chr20(+):3975987-3976899      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Cytoplasmic   Reliability : 1.072 Nuclear   Reliability : 1.034

CDS

ATGGTCCAAAACCTCTACGATGCCATTGTTTACGAAAACTACGACGAAGCGGTTTCCCAAGCCTTAAACTGTATGCGTTATGATCGACCCGATGTCATTAAATTAACTGTCGACAAGTTAATTCGGCAACAGAGAACATTTATTGCTGGTTTCGCATACAAACTGGGGGCTGCTGGGGGCGAAGATATTATAAGGTCCGAGTTCCCCCCGGCGTACAGAATGGTGCTAAACGATACTTTTATAAAATTCATCAACTACCAAGATCGTGTTTCCATAGAGTTAGGTATAACTCCAGACTTTGCCGATGACAAGAGGCTCTACGGCAACAACGATCATCCGCATAGCCAGAACTACCATTGGAAGCTCGAGCCCGTGATGGATGGTAAAAAGATTTATTTCAAGATACGTCATCGCGTAGAAGAAAGGTACTTGAAGCTGGCCAACAACGCGGACCGCGACGGCGACTATCAAGCGTATGCTTCCACAAACTCAGACACGAACAGGCACCTGTGGTCGTTCCAGCCTGTGATGTACAACGGGGAGCTCTTGTTCTTCGTTATCAATCGTGCGCATTTCCAAGCGCTGAAGTTCGGCCGACGCGTATATGATGGTAGTCGCAACCTTTACAGTCAAGGTGGAAACTTTGCCGCCCACCCTGAACTTAACGGCTGGACCATCGAAGCTTTCGGAGACAGTTCCAAATTTGTAATTATCAGGGACTAG

Protein

MVQNLYDAIVYENYDEAVSQALNCMRYDRPDVIKLTVDKLIRQQRTFIAGFAYKLGAAGGEDIIRSEFPPAYRMVLNDTFIKFINYQDRVSIELGITPDFADDKRLYGNNDHPHSQNYHWKLEPVMDGKKIYFKIRHRVEERYLKLANNADRDGDYQAYASTNSDTNRHLWSFQPVMYNGELLFFVINRAHFQALKFGRRVYDGSRNLYSQGGNFAAHPELNGWTIEAFGDSSKFVIIRD

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  

Feature

chain  Microvitellogenin

Uniprot

H9B459   H9J4N6   H9JXA6   H9B462   H9JVX1   P19616   + More
Q0VJU3   H9J4M4   Q05432   H9J4M3   H9J4M7   H9J4M5   H9J4M8   A0A0B5Z504   H9B453   H9J4N1   H9J4N4   H9J4E8   H9JX32   H9J4E6   Q75RW3   H9J4N3   H9JX33   Q6Q0S8   H9J4F5   D4QGB9   H9J4F6   Q00801   Q00802   C7A8A3   H9J4L1   H9J4G3   H9J4L6   A7LIK7   P09336   D4QGC0   H9J4E7   H9J4N5   H9B458   E5EVW2   P09338   H9B443   P09334   C7A8A2   Q17185   H9J4G4   H9B444   H9B436   H9B450   H9J4G0   P09335   H9J4L5   H9B437   H9J4F9   H9B440   H9J4G1   H9J4G5   A0A2W1BZD4   A0A3G1LBE0   H9B449   H9JMX4   H9B451   A0A385HW64   Q76IB6   H9B447   E5EVW3   H9B448   A0A194QYV5   H9B445   H9B455   A0A2A4K904   H9JJC0   H9JJ72   A0A2W1BV38   H9B460   A0A3G1LBD4   B5BSX5   H9B454   H9JF68   Q2PQU4   A0A194Q636   H9JL03   H9J4L7   A0A2W1BPF5   P09337   A0A2A4JTT3   H9J4G2   A0A2H1WST8   A0A2A4IYY5   H9B457  

Pubmed

26078299    19121390    2583514    2454229    1343778    26126120    + More
1883839    25379889    3342240    21457781    21514389    22948915    2002509    28756777    29175381    12871935    26354079    18840462    17112968   

EMBL

JN977544    AFC87824.1    BABH01022014    BABH01035696    JN977547    AFC87827.1    + More
BABH01040631    M28820    J03768    AM293331    CAL25136.1    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021988    BABH01021999    BABH01022000    BABH01021998    JN977527    AFC87807.1    KM926620    AJI02615.1    JN977538    AFC87818.1    BABH01022003    BABH01022005    BABH01022004    BABH01043627    BABH01022007    AB158646    BAD07027.1    BABH01043629    AY568957    AAS75435.1    BABH01021941    JN977524    AFC87804.1    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    X54734    X54736    FJ214661    ACO35751.1    BABH01021908    BABH01021929    BABH01021930    EU024295    ABS71120.1    X07554    AB553284    BAJ04788.1    BABH01022006    BABH01022013    JN977543    AFC87823.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    X07556    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    X54735    CAA38532.1    BABH01021925    JN977523    AFC87803.1    JN977529    AFC87809.1    JN977521    AFC87801.1    JN977535    AFC87815.1    BABH01021933    BABH01021934    X07553    JN977522    AFC87802.1    BABH01021935    JN977525    AFC87805.1    BABH01021931    BABH01021932    BABH01021921    KZ149893    PZC78944.1    MF497270    AUB45122.1    JN977534    AFC87814.1    BABH01028980    JN977536    AFC87816.1    MG799571    AXY55009.1    AB098260    BAC82630.1    BABH01026781    JN977532    AFC87812.1    HM012807    ADQ89806.1    JN977533    AFC87813.1    KQ460930    KPJ10718.1    BABH01028979    JN977530    AFC87810.1    JN977540    AFC87820.1    NWSH01000017    PCG80765.1    BABH01036437    JN977541    AFC87821.1    PZC78918.1    JN977545    AFC87825.1    MF497269    AUB45121.1    AB436163    BAG70410.1    JN977539    AFC87819.1    BABH01026782    JN977537    AFC87817.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    KQ459582    KPI98870.1    KZ149940    PZC76929.1    X07555    NWSH01000685    PCG74802.1    ODYU01010790    SOQ56108.1    NWSH01005147    PCG64400.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268   

PRIDE

H9B459    H9J4N6    H9JXA6    H9B462    H9J4M4    Q05432    + More
H9J4M3    H9J4M7    H9J4M5    H9J4M8    H9B453    H9J4N1    H9J4N4    H9J4E8    H9JX32    H9J4E6    Q75RW3    H9J4N3    H9JX33    Q6Q0S8    H9J4F5    D4QGB9    H9J4F6    Q00801    Q00802    C7A8A3    H9J4L1    H9J4G3    H9J4L6    A7LIK7    P09336    D4QGC0    H9J4E7    H9J4N5    H9B458    E5EVW2    P09338    P09334    C7A8A2    Q17185    H9J4G4    H9B444    H9B436    H9B450    H9J4G0    P09335    H9J4L5    H9B437    H9J4F9    H9B440    H9J4G1    H9J4G5    H9B449    H9JMX4    H9B451    H9B447    E5EVW3    H9B448    H9B445    H9B455    H9JJC0    H9JJ72    H9B460    B5BSX5    H9B454    H9JF68    Q2PQU4    H9JL03    H9J4L7    P09337    H9J4G2    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9B459   H9J4N6   H9JXA6   H9B462   H9JVX1   P19616   + More
Q0VJU3   H9J4M4   Q05432   H9J4M3   H9J4M7   H9J4M5   H9J4M8   A0A0B5Z504   H9B453   H9J4N1   H9J4N4   H9J4E8   H9JX32   H9J4E6   Q75RW3   H9J4N3   H9JX33   Q6Q0S8   H9J4F5   D4QGB9   H9J4F6   Q00801   Q00802   C7A8A3   H9J4L1   H9J4G3   H9J4L6   A7LIK7   P09336   D4QGC0   H9J4E7   H9J4N5   H9B458   E5EVW2   P09338   H9B443   P09334   C7A8A2   Q17185   H9J4G4   H9B444   H9B436   H9B450   H9J4G0   P09335   H9J4L5   H9B437   H9J4F9   H9B440   H9J4G1   H9J4G5   A0A2W1BZD4   A0A3G1LBE0   H9B449   H9JMX4   H9B451   A0A385HW64   Q76IB6   H9B447   E5EVW3   H9B448   A0A194QYV5   H9B445   H9B455   A0A2A4K904   H9JJC0   H9JJ72   A0A2W1BV38   H9B460   A0A3G1LBD4   B5BSX5   H9B454   H9JF68   Q2PQU4   A0A194Q636   H9JL03   H9J4L7   A0A2W1BPF5   P09337   A0A2A4JTT3   H9J4G2   A0A2H1WST8   A0A2A4IYY5   H9B457  

PDB

4IY9     E-value=1.22061e-27,     Score=304

KEGG

101737937    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

Length:

240

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.27036

Exp number, first 60 AAs:

0.03269

Total prob of N-in:

0.07651

outside

1  -  240

 

 

Pi

434.435205

Theta

212.81842

Tajima's D

3.278574

CLR

0.277705

CSRT

0.989200539973001

Interpretation

Uncertain