Gene

KWMTBOMO11950  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004476

Annotation

PREDICTED:_microvitellogenin-like_[Bombyx_mori]

Location

Bomo_Chr20(+):3965737-3966650      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Nuclear   Reliability : 1.186

CDS

ATGGTCCATAACCTCTACGATGCCATTGTTTACGAAAACTACGACGAAGCGGTTTCCCAAGCCTTAAACTGTATGCGTTATGATCGACCCGATGTCATTAAATTAACTGTCGACAGGTTAATTCGACAACAGAGAACATATATTGCCCCTTTCGCATACAAACTGGGGGCTGCTGGGGGCGAAGATATTATAAGGTCCGAGTTCCCCCCGGCGTACAGAATGGTGCTAAACGATACTTTTATAAAATTCATCAACTACCAAGATCGTGTCTCCATAGAGTTAGGTCCAACTCCAGACTTTGCCAATGACAAGAGGCTCTACGGCAACAACGATCATCCGCATAGCCAGAATTACCATTGGAAGCTCGAACCCGTGGTGGATGGTAAAAAGATTTATTTCAAGATACGTCATCGTCTAGAAAATAGGTACATGAAGCTGGGCAACGACGCGGACCGCGACGGCGACTATCAAGCGTATGCTTCCGCAAACTCAGACACGAACAGGCACCTGTGGTCGTTCCAGCCTGTGATGTACAACGGGGAGCTCTTGTTCTTCGTTATCAATCGTGCGCATTTCCAAGCGCTGAAGTTCGGCCGACGCGTATATGATGGTAGTCGCAACCTTTACAGTCAAGGTGGAAACTTTGCAGCCCACCCTGAACTTAACGGCTGGACCATCGAAGCTTTCGGAGACAGTTCCAAATTTGTAATTATCAGGGACTAG

Protein

MVHNLYDAIVYENYDEAVSQALNCMRYDRPDVIKLTVDRLIRQQRTYIAPFAYKLGAAGGEDIIRSEFPPAYRMVLNDTFIKFINYQDRVSIELGPTPDFANDKRLYGNNDHPHSQNYHWKLEPVVDGKKIYFKIRHRLENRYMKLGNDADRDGDYQAYASANSDTNRHLWSFQPVMYNGELLFFVINRAHFQALKFGRRVYDGSRNLYSQGGNFAAHPELNGWTIEAFGDSSKFVIIRD

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  

Feature

chain  Microvitellogenin

Uniprot

H9J4N6   H9B459   H9JXA6   H9B462   H9JVX1   P19616   + More
Q0VJU3   H9J4M4   Q05432   H9J4M3   H9J4M7   H9J4M8   H9J4M5   H9J4N1   A0A0B5Z504   H9B453   H9J4E8   H9J4N4   H9JX32   H9J4E6   Q75RW3   H9JX33   H9J4F5   Q00801   H9J4N3   Q6Q0S8   H9J4L6   H9J4G3   D4QGB9   H9J4F6   Q00802   A7LIK7   C7A8A3   H9J4N5   H9J4L1   H9B458   H9J4E7   P09338   D4QGC0   H9B444   E5EVW2   P09336   H9B443   P09334   Q17185   C7A8A2   H9B450   H9J4G4   H9B436   H9J4L5   P09335   H9J4F9   H9B440   H9J4G0   H9B437   H9J4G5   H9J4G1   E5EVW3   H9B448   H9B449   H9JMX4   H9B451   Q76IB6   A0A3G1LBE0   A0A2W1BZD4   H9B447   H9B455   A0A194QYV5   H9JJC0   A0A385HW64   H9JJ72   P09337   H9B460   B5BSX5   H9JF68   A0A2W1BV38   H9B445   A0A194Q636   H9J4L7   A0A2W1BPF5   A0A2A4K904   A0A3G1LBD4   Q2PQU4   H9B454   H9JL03   H9J4G2   A0A2A4JTT3   A0A2H1WST8   A0A2A4IYY5   H9B457  

Pubmed

19121390    26078299    2583514    2454229    1343778    26126120    + More
1883839    25379889    3342240    21457781    21514389    22948915    2002509    12871935    29175381    28756777    26354079    18840462    17112968   

EMBL

BABH01022014    JN977544    AFC87824.1    BABH01035696    JN977547    AFC87827.1    + More
BABH01040631    M28820    J03768    AM293331    CAL25136.1    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021988    BABH01021999    BABH01022000    BABH01021998    JN977527    AFC87807.1    BABH01022003    KM926620    AJI02615.1    JN977538    AFC87818.1    BABH01022004    BABH01022005    BABH01043627    BABH01022007    AB158646    BAD07027.1    BABH01043629    BABH01021941    JN977524    AFC87804.1    X54734    AY568957    AAS75435.1    BABH01021930    BABH01021929    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    X54736    EU024295    ABS71120.1    FJ214661    ACO35751.1    BABH01022013    BABH01021908    JN977543    AFC87823.1    BABH01022006    X07556    AB553284    BAJ04788.1    JN977529    AFC87809.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    X07554    JN977528    AFC87808.1    X07552    X54735    CAA38532.1    FJ214660    ACO35750.1    JN977535    AFC87815.1    BABH01021925    JN977523    AFC87803.1    JN977521    AFC87801.1    X07553    BABH01021935    JN977525    AFC87805.1    BABH01021933    BABH01021934    JN977522    AFC87802.1    BABH01021921    BABH01021931    BABH01021932    HM012807    ADQ89806.1    JN977533    AFC87813.1    JN977534    AFC87814.1    BABH01028980    JN977536    AFC87816.1    AB098260    BAC82630.1    MF497270    AUB45122.1    KZ149893    PZC78944.1    BABH01026781    JN977532    AFC87812.1    JN977540    AFC87820.1    KQ460930    KPJ10718.1    BABH01036437    JN977541    AFC87821.1    MG799571    AXY55009.1    X07555    JN977545    AFC87825.1    AB436163    BAG70410.1    BABH01026782    JN977537    AFC87817.1    PZC78918.1    BABH01028979    JN977530    AFC87810.1    KQ459582    KPI98870.1    KZ149940    PZC76929.1    NWSH01000017    PCG80765.1    MF497269    AUB45121.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    JN977539    AFC87819.1    NWSH01000685    PCG74802.1    ODYU01010790    SOQ56108.1    NWSH01005147    PCG64400.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220   

PRIDE

H9J4N6    H9B459    H9JXA6    H9B462    H9J4M4    Q05432    + More
H9J4M3    H9J4M7    H9J4M8    H9J4M5    H9J4N1    H9B453    H9J4E8    H9J4N4    H9JX32    H9J4E6    Q75RW3    H9JX33    H9J4F5    Q00801    H9J4N3    Q6Q0S8    H9J4L6    H9J4G3    D4QGB9    H9J4F6    Q00802    A7LIK7    C7A8A3    H9J4N5    H9J4L1    H9B458    H9J4E7    P09338    D4QGC0    H9B444    E5EVW2    P09336    P09334    Q17185    C7A8A2    H9B450    H9J4G4    H9B436    H9J4L5    P09335    H9J4F9    H9B440    H9J4G0    H9B437    H9J4G5    H9J4G1    E5EVW3    H9B448    H9B449    H9JMX4    H9B451    H9B447    H9B455    H9JJC0    H9JJ72    P09337    H9B460    B5BSX5    H9JF68    H9B445    H9J4L7    Q2PQU4    H9B454    H9JL03    H9J4G2    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4N6   H9B459   H9JXA6   H9B462   H9JVX1   P19616   + More
Q0VJU3   H9J4M4   Q05432   H9J4M3   H9J4M7   H9J4M8   H9J4M5   H9J4N1   A0A0B5Z504   H9B453   H9J4E8   H9J4N4   H9JX32   H9J4E6   Q75RW3   H9JX33   H9J4F5   Q00801   H9J4N3   Q6Q0S8   H9J4L6   H9J4G3   D4QGB9   H9J4F6   Q00802   A7LIK7   C7A8A3   H9J4N5   H9J4L1   H9B458   H9J4E7   P09338   D4QGC0   H9B444   E5EVW2   P09336   H9B443   P09334   Q17185   C7A8A2   H9B450   H9J4G4   H9B436   H9J4L5   P09335   H9J4F9   H9B440   H9J4G0   H9B437   H9J4G5   H9J4G1   E5EVW3   H9B448   H9B449   H9JMX4   H9B451   Q76IB6   A0A3G1LBE0   A0A2W1BZD4   H9B447   H9B455   A0A194QYV5   H9JJC0   A0A385HW64   H9JJ72   P09337   H9B460   B5BSX5   H9JF68   A0A2W1BV38   H9B445   A0A194Q636   H9J4L7   A0A2W1BPF5   A0A2A4K904   A0A3G1LBD4   Q2PQU4   H9B454   H9JL03   H9J4G2   A0A2A4JTT3   A0A2H1WST8   A0A2A4IYY5   H9B457  

PDB

4IY9     E-value=1.44228e-27,     Score=303

KEGG

101737937    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

Length:

240

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.22092

Exp number, first 60 AAs:

0.00656

Total prob of N-in:

0.06265

outside

1  -  240

 

 

Pi

152.253302

Theta

116.98215

Tajima's D

1.132011

CLR

0

CSRT

0.694615269236538

Interpretation

Uncertain