SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11950  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004476
Annotation
PREDICTED:_microvitellogenin-like_[Bombyx_mori]
Full name
Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Location in the cell
Nuclear   Reliability : 1.186
 

Sequence

CDS
ATGGTCCATAACCTCTACGATGCCATTGTTTACGAAAACTACGACGAAGCGGTTTCCCAAGCCTTAAACTGTATGCGTTATGATCGACCCGATGTCATTAAATTAACTGTCGACAGGTTAATTCGACAACAGAGAACATATATTGCCCCTTTCGCATACAAACTGGGGGCTGCTGGGGGCGAAGATATTATAAGGTCCGAGTTCCCCCCGGCGTACAGAATGGTGCTAAACGATACTTTTATAAAATTCATCAACTACCAAGATCGTGTCTCCATAGAGTTAGGTCCAACTCCAGACTTTGCCAATGACAAGAGGCTCTACGGCAACAACGATCATCCGCATAGCCAGAATTACCATTGGAAGCTCGAACCCGTGGTGGATGGTAAAAAGATTTATTTCAAGATACGTCATCGTCTAGAAAATAGGTACATGAAGCTGGGCAACGACGCGGACCGCGACGGCGACTATCAAGCGTATGCTTCCGCAAACTCAGACACGAACAGGCACCTGTGGTCGTTCCAGCCTGTGATGTACAACGGGGAGCTCTTGTTCTTCGTTATCAATCGTGCGCATTTCCAAGCGCTGAAGTTCGGCCGACGCGTATATGATGGTAGTCGCAACCTTTACAGTCAAGGTGGAAACTTTGCAGCCCACCCTGAACTTAACGGCTGGACCATCGAAGCTTTCGGAGACAGTTCCAAATTTGTAATTATCAGGGACTAG
Protein
MVHNLYDAIVYENYDEAVSQALNCMRYDRPDVIKLTVDRLIRQQRTYIAPFAYKLGAAGGEDIIRSEFPPAYRMVLNDTFIKFINYQDRVSIELGPTPDFANDKRLYGNNDHPHSQNYHWKLEPVVDGKKIYFKIRHRLENRYMKLGNDADRDGDYQAYASANSDTNRHLWSFQPVMYNGELLFFVINRAHFQALKFGRRVYDGSRNLYSQGGNFAAHPELNGWTIEAFGDSSKFVIIRD

Summary

Miscellaneous
This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.
Similarity
Belongs to the 30 kDa lipoprotein family.
Keywords
Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  
Feature
chain  Microvitellogenin
EMBL
BABH01022014    JN977544    AFC87824.1    BABH01035696    JN977547    AFC87827.1    + More
BABH01040631    M28820    J03768    AM293331    CAL25136.1    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021988    BABH01021999    BABH01022000    BABH01021998    JN977527    AFC87807.1    BABH01022003    KM926620    AJI02615.1    JN977538    AFC87818.1    BABH01022004    BABH01022005    BABH01043627    BABH01022007    AB158646    BAD07027.1    BABH01043629    BABH01021941    JN977524    AFC87804.1    X54734    AY568957    AAS75435.1    BABH01021930    BABH01021929    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    X54736    EU024295    ABS71120.1    FJ214661    ACO35751.1    BABH01022013    BABH01021908    JN977543    AFC87823.1    BABH01022006    X07556    AB553284    BAJ04788.1    JN977529    AFC87809.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    X07554    JN977528    AFC87808.1    X07552    X54735    CAA38532.1    FJ214660    ACO35750.1    JN977535    AFC87815.1    BABH01021925    JN977523    AFC87803.1    JN977521    AFC87801.1    X07553    BABH01021935    JN977525    AFC87805.1    BABH01021933    BABH01021934    JN977522    AFC87802.1    BABH01021921    BABH01021931    BABH01021932    HM012807    ADQ89806.1    JN977533    AFC87813.1    JN977534    AFC87814.1    BABH01028980    JN977536    AFC87816.1    AB098260    BAC82630.1    MF497270    AUB45122.1    KZ149893    PZC78944.1    BABH01026781    JN977532    AFC87812.1    JN977540    AFC87820.1    KQ460930    KPJ10718.1    BABH01036437    JN977541    AFC87821.1    MG799571    AXY55009.1    X07555    JN977545    AFC87825.1    AB436163    BAG70410.1    BABH01026782    JN977537    AFC87817.1    PZC78918.1    BABH01028979    JN977530    AFC87810.1    KQ459582    KPI98870.1    KZ149940    PZC76929.1    NWSH01000017    PCG80765.1    MF497269    AUB45121.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    JN977539    AFC87819.1    NWSH01000685    PCG74802.1    ODYU01010790    SOQ56108.1    NWSH01005147    PCG64400.1    JN977542    AFC87822.1   
Pfam
PF03260   Lipoprotein_11
Interpro
IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       
SUPFAM
SSF50370   SSF50370       
Gene 3D
PDB
4IY9     E-value=1.44228e-27,     Score=303

Ontologies

Topology

Subcellular location
  
Length:
240
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.22092
Exp number, first 60 AAs:
0.00656
Total prob of N-in:
0.06265
outside
1  -  240
 
 

Population Genetic Test Statistics

Pi
152.253302
Theta
116.98215
Tajima's D
1.132011
CLR
0
CSRT
0.694615269236538
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
27102218 IYGNNDHPHSQNYHWKIEPVVDGK 95.65 6e-10
25860555 AEYIECDITTDIDTVSKR 95.65 1e-08
24093152 IGKPASYEAIK 95.65 1e-08
27102218 IEPVVDGK 95.65 1e-08
24093152 DGDEYNIVTSSTFK 100.00 2e-04
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