Gene

KWMTBOMO11948

Pre Gene Modal

BGIBMGA013684

Annotation

PREDICTED:_microvitellogenin-like?_partial_[Bombyx_mori]

Location

Bomo_Chr20(+):3951387-3952528      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      

Location in the cell

Cytoplasmic   Reliability : 1.248

CDS

ATGGTGCTAAACGATACTTTTATAAAATTCATCAACTACCAAGATCGTGTTTCCTTTGAGTTAGGTCCAACTCTAGACTTTGCCAATGACAAGAGGCTCTATGGCAACCACCGACAACCGTATAGCCAGAATTACCATTCTTCCAGGGGTAAATTTATTGTCCGAGCACTCTTCCTTTCTGCGGTCCGACTGCACGAAGATCTGTTCTTCGTTAAAATAAACAGTTATAAGTACGACTTGGCTCTTAACTACGGTCTCGGCAAGGATTTCGAAGGAGACAGAACGGCCCACGGCGATTCTGATACCAGGACCAGGTTTAGAGTTACGTGGAAGTTTGTCTCTTACTGGACAGAAGATAAGGTATACTTCGAGATTCGTCTTATAGATATTGCATACTTCTTGAACCTTGGGAATACGAGAGACAGAGACGGTGAACACGGAGCTTATGGATCTACTAACCACGACACAGACAGGCACTTGTGGTACGTGGAACCAGTCAGACATAAAGGCAAACTCCTGTTCTACATCATCAACAAGGAGTACAACGAACTTCTGAAACTCGGCCAGTCAACGGACAGCGATGATGATCGTACAGCCTATGAACAATCCACCAGGGACTTTATTTCGGAAAAATTCGCTTGGTACATTGACCAAATTTAG

Protein

MVLNDTFIKFINYQDRVSFELGPTLDFANDKRLYGNHRQPYSQNYHSSRGKFIVRALFLSAVRLHEDLFFVKINSYKYDLALNYGLGKDFEGDRTAHGDSDTRTRFRVTWKFVSYWTEDKVYFEIRLIDIAYFLNLGNTRDRDGEHGAYGSTNHDTDRHLWYVEPVRHKGKLLFYIINKEYNELLKLGQSTDSDDDRTAYEQSTRDFISEKFAWYIDQI

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  

Feature

chain  Microvitellogenin

Uniprot

H9J4N4   H9JX32   H9J4E6   H9J4N3   H9J4N1   H9JX33   + More
H9J4E7   H9J4N5   H9B453   H9J4E8   P19616   Q0VJU3   H9J4M3   H9J4M4   Q05432   H9J4M8   H9J4L1   H9J4F5   Q00801   H9B459   H9J4N6   H9J4L5   H9J4M7   Q6Q0S8   D4QGB9   H9J4F6   C7A8A3   Q00802   H9J4G3   D4QGC0   E5EVW2   H9B458   P09336   P09338   A0A2W1BZD4   H9B444   A0A3G1LBE0   A7LIK7   H9B436   H9B455   A0A2A4K904   H9B449   H9JMX4   H9J4G0   H9JJ72   H9J4F9   P09335   H9B440   Q76IB6   A0A2A4JTT3   H9JL03   H9B460   H9B451   B5BSX5   E5EVW3   H9B448   H9JF68  

Pubmed

19121390    26078299    2583514    2454229    1343778    1883839    + More
21457781    21514389    22948915    3342240    28756777    29175381    25379889    12871935    18840462   

EMBL

BABH01022005    BABH01043627    BABH01022007    BABH01022003    BABH01043629    BABH01022006    + More
BABH01022013    JN977538    AFC87818.1    BABH01022004    M28820    J03768    AM293331    CAL25136.1    BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01022000    BABH01021908    BABH01021941    JN977524    AFC87804.1    X54734    JN977544    AFC87824.1    BABH01022014    BABH01021929    BABH01021999    AY568957    AAS75435.1    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    FJ214661    ACO35751.1    X54736    AB553284    BAJ04788.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    JN977543    AFC87823.1    X07554    X07556    KZ149893    PZC78944.1    JN977529    AFC87809.1    MF497270    AUB45122.1    EU024295    ABS71120.1    JN977521    AFC87801.1    JN977540    AFC87820.1    NWSH01000017    PCG80765.1    JN977534    AFC87814.1    BABH01028980    BABH01021933    BABH01021934    BABH01036437    BABH01021935    X07553    JN977525    AFC87805.1    AB098260    BAC82630.1    NWSH01000685    PCG74802.1    BABH01011413    JN977545    AFC87825.1    JN977536    AFC87816.1    AB436163    BAG70410.1    BABH01021925    HM012807    ADQ89806.1    JN977533    AFC87813.1    BABH01026782    JN977537    AFC87817.1   

Proteomes

UP000005204    UP000218220   

PRIDE

H9J4N4    H9JX32    H9J4E6    H9J4N3    H9J4N1    H9JX33    + More
H9J4E7    H9J4N5    H9B453    H9J4E8    H9J4M3    H9J4M4    Q05432    H9J4M8    H9J4L1    H9J4F5    Q00801    H9B459    H9J4N6    H9J4L5    H9J4M7    Q6Q0S8    D4QGB9    H9J4F6    C7A8A3    Q00802    H9J4G3    D4QGC0    E5EVW2    H9B458    P09336    P09338    H9B444    A7LIK7    H9B436    H9B455    H9B449    H9JMX4    H9J4G0    H9JJ72    H9J4F9    P09335    H9B440    H9JL03    H9B460    H9B451    B5BSX5    E5EVW3    H9B448    H9JF68   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4N4   H9JX32   H9J4E6   H9J4N3   H9J4N1   H9JX33   + More
H9J4E7   H9J4N5   H9B453   H9J4E8   P19616   Q0VJU3   H9J4M3   H9J4M4   Q05432   H9J4M8   H9J4L1   H9J4F5   Q00801   H9B459   H9J4N6   H9J4L5   H9J4M7   Q6Q0S8   D4QGB9   H9J4F6   C7A8A3   Q00802   H9J4G3   D4QGC0   E5EVW2   H9B458   P09336   P09338   A0A2W1BZD4   H9B444   A0A3G1LBE0   A7LIK7   H9B436   H9B455   A0A2A4K904   H9B449   H9JMX4   H9J4G0   H9JJ72   H9J4F9   P09335   H9B440   Q76IB6   A0A2A4JTT3   H9JL03   H9B460   H9B451   B5BSX5   E5EVW3   H9B448   H9JF68  

PDB

4IY9     E-value=1.19988e-17,     Score=217

KEGG

105842689    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

Length:

219

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00725999999999999

Exp number, first 60 AAs:

0.00281

Total prob of N-in:

0.03956

outside

1  -  219

 

 

Pi

278.588999

Theta

193.929713

Tajima's D

1.333109

CLR

0

CSRT

0.746862656867157

Interpretation

Uncertain