Gene

KWMTBOMO11947

Pre Gene Modal

BGIBMGA014097

Annotation

30K_protein_20?_partial_[Bombyx_mori]

Location

Bomo_Chr20(-):3939593-3940596      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Extracellular   Reliability : 1.543 PlasmaMembrane   Reliability : 1.638

CDS

ATGTCGAATACTGATTTTGTTACAGCTATGGGGTTAAAAAAAATTGCTGTGATTTTAATGTGTGCGTTGGCTGTCAATGCCAACAGCATTGTCAATGATACCGGTAGCAGTACTGTAGCAGCTACCATCAGTAGCACCGACTCAACAAGCACTGAAGCAACTGTGAGTATCGAGAATATCAACTCAACTTTGGCAATGAGCGACATTGAGGCTAAGAACATAGAAGATGCGCTCTACAACGAAATCGTCTCAAGAGATTTCTACCAGGCGGTACATCGAACCGCGATAATGTATGGAGCAGGATGGGACTCCATGATTACGAATGTCGTTAACCGGCTCATCGATAACGGCCAGTCCCAACTAATTGATTACGCATACAAACTCACAGCTTCCAGGGGTACATTCATTGTCCGAGCACTCTTCCCTTCTGCGGTCCGACTGCACGAAGATCTGTTCTTCGTTAAAATAATCAGTTATAAGTACGACTTTGCTCTCAAGTTCGGTCTCGGCGCAGACTTCGCCGGTGACAAAACAGCCTATGGTGATTCTGACACCAGTACCAGGTTTAGAGTTACGTGGAAGTTTATCCCTTACTGGATAGAAGATAGGTTATATTTCAAGATTCGTCCAATAGATATTGCGTACTTCTTGAAACTTGGCAATTCGAGAGACAAAGACGGTGACCACGGAGCTTATGGATCTACTAACCACGATACAGACAGGCACTTGTGGTACCTCAAACCAGTGAGACATAATGGCAAGCTCCTGTTCTACATCATCAACAAGGAGTACGACGAACTCCTGAAACTCGGCCAATCAACGGACGTCGATGGTGATCGTACAGCTTATGGGCACTCCGAGAAGGACTTTAACCCAGATAAATTCGCTTGGTACATTAAACTGGTATAA

Protein

MSNTDFVTAMGLKKIAVILMCALAVNANSIVNDTGSSTVAATISSTDSTSTEATVSIENINSTLAMSDIEAKNIEDALYNEIVSRDFYQAVHRTAIMYGAGWDSMITNVVNRLIDNGQSQLIDYAYKLTASRGTFIVRALFPSAVRLHEDLFFVKIISYKYDFALKFGLGADFAGDKTAYGDSDTSTRFRVTWKFIPYWIEDRLYFKIRPIDIAYFLKLGNSRDKDGDHGAYGSTNHDTDRHLWYLKPVRHNGKLLFYIINKEYDELLKLGQSTDVDGDRTAYGHSEKDFNPDKFAWYIKLV

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  

Feature

chain  Microvitellogenin

Uniprot

H9JX32   H9J4E6   H9J4N4   H9J4N1   H9J4N3   H9JX33   + More
H9J4N5   H9J4E7   H9J4E8   H9B453   P19616   Q0VJU3   H9J4M3   H9J4M4   Q05432   Q00801   H9J4M5   H9J4F5   A0A0B5Z504   H9J4M8   Q6Q0S8   Q75RW3   H9J4F6   D4QGB9   H9J4L5   H9J4M7   Q00802   P09338   H9B459   E5EVW2   H9B450   D4QGC0   C7A8A3   H9B444   P09336   A7LIK7   H9J4N6   H9J4G3   P09335   H9JXA6   H9B458   H9J4G4   H9J4F9   H9B440   H9J4L6   H9B436   Q76IB6   H9B437   H9J4G0   H9J4G1   A0A385HW64   A0A2W1BZD4   H9B443   P09334   C7A8A2   A0A194QYV5   Q17185   A0A2W1BPF5   A0A3G1LBE0   H9JVX1   H9B449   H9JMX4   A0A194Q636   A0A2A4K904   P09337   A0A3G1LBD4   A0A2W1BV38   H9J4G5   H9B460   H9B451   B5BSX5   H9JJC0   Q2PQU4   H9B455   A0A2A4IYY5   H9B454   H9JJ72   H9JF68   H9B445   A0A2A4JTT3   E5EVW3   H9B448   H9B447   A0A2H1WST8   H9B457  

Pubmed

19121390    26078299    2583514    2454229    1343778    1883839    + More
26126120    3342240    21457781    21514389    22948915    25379889    12871935    28756777    26354079    2002509    29175381    18840462    17112968   

EMBL

BABH01043627    BABH01022007    BABH01022005    BABH01022003    BABH01043629    BABH01022013    + More
BABH01022006    BABH01022004    JN977538    AFC87818.1    M28820    J03768    AM293331    CAL25136.1    BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    X54734    BABH01021998    JN977527    AFC87807.1    BABH01021941    JN977524    AFC87804.1    KM926620    AJI02615.1    BABH01022000    AY568957    AAS75435.1    AB158646    BAD07027.1    BABH01021937    JN977519    AFC87799.1    AB553283    BAJ04787.1    BABH01021929    BABH01021999    X54736    X07556    JN977544    AFC87824.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    JN977535    AFC87815.1    AB553284    BAJ04788.1    FJ214661    ACO35751.1    JN977529    AFC87809.1    X07554    EU024295    ABS71120.1    BABH01022014    X07553    BABH01035696    JN977543    AFC87823.1    BABH01021925    JN977523    AFC87803.1    BABH01021935    JN977525    AFC87805.1    BABH01021930    JN977521    AFC87801.1    AB098260    BAC82630.1    JN977522    AFC87802.1    BABH01021933    BABH01021934    BABH01021931    BABH01021932    MG799571    AXY55009.1    KZ149893    PZC78944.1    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    KQ460930    KPJ10718.1    X54735    CAA38532.1    KZ149940    PZC76929.1    MF497270    AUB45122.1    BABH01040631    JN977534    AFC87814.1    BABH01028980    KQ459582    KPI98870.1    NWSH01000017    PCG80765.1    X07555    MF497269    AUB45121.1    PZC78918.1    BABH01021921    JN977545    AFC87825.1    JN977536    AFC87816.1    AB436163    BAG70410.1    BABH01036437    JN977541    AFC87821.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    JN977540    AFC87820.1    NWSH01005147    PCG64400.1    JN977539    AFC87819.1    BABH01026782    JN977537    AFC87817.1    BABH01028979    JN977530    AFC87810.1    NWSH01000685    PCG74802.1    HM012807    ADQ89806.1    JN977533    AFC87813.1    BABH01026781    JN977532    AFC87812.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220   

PRIDE

H9JX32    H9J4E6    H9J4N4    H9J4N1    H9J4N3    H9JX33    + More
H9J4N5    H9J4E7    H9J4E8    H9B453    H9J4M3    H9J4M4    Q05432    Q00801    H9J4M5    H9J4F5    H9J4M8    Q6Q0S8    Q75RW3    H9J4F6    D4QGB9    H9J4L5    H9J4M7    Q00802    P09338    H9B459    E5EVW2    H9B450    D4QGC0    C7A8A3    H9B444    P09336    A7LIK7    H9J4N6    H9J4G3    P09335    H9JXA6    H9B458    H9J4G4    H9J4F9    H9B440    H9J4L6    H9B436    H9B437    H9J4G0    H9J4G1    P09334    C7A8A2    Q17185    H9B449    H9JMX4    P09337    H9J4G5    H9B460    H9B451    B5BSX5    H9JJC0    Q2PQU4    H9B455    H9B454    H9JJ72    H9JF68    H9B445    E5EVW3    H9B448    H9B447    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9JX32   H9J4E6   H9J4N4   H9J4N1   H9J4N3   H9JX33   + More
H9J4N5   H9J4E7   H9J4E8   H9B453   P19616   Q0VJU3   H9J4M3   H9J4M4   Q05432   Q00801   H9J4M5   H9J4F5   A0A0B5Z504   H9J4M8   Q6Q0S8   Q75RW3   H9J4F6   D4QGB9   H9J4L5   H9J4M7   Q00802   P09338   H9B459   E5EVW2   H9B450   D4QGC0   C7A8A3   H9B444   P09336   A7LIK7   H9J4N6   H9J4G3   P09335   H9JXA6   H9B458   H9J4G4   H9J4F9   H9B440   H9J4L6   H9B436   Q76IB6   H9B437   H9J4G0   H9J4G1   A0A385HW64   A0A2W1BZD4   H9B443   P09334   C7A8A2   A0A194QYV5   Q17185   A0A2W1BPF5   A0A3G1LBE0   H9JVX1   H9B449   H9JMX4   A0A194Q636   A0A2A4K904   P09337   A0A3G1LBD4   A0A2W1BV38   H9J4G5   H9B460   H9B451   B5BSX5   H9JJC0   Q2PQU4   H9B455   A0A2A4IYY5   H9B454   H9JJ72   H9JF68   H9B445   A0A2A4JTT3   E5EVW3   H9B448   H9B447   A0A2H1WST8   H9B457  

PDB

4IY9     E-value=2.69052e-34,     Score=362

KEGG

101737326    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 27,         Likelihood:  0.838974

 

 

Length:

302

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.24734

Exp number, first 60 AAs:

2.19932

Total prob of N-in:

0.05457

outside

1  -  302

 

 

Pi

240.623486

Theta

206.153473

Tajima's D

0.659039

CLR

0.10091

CSRT

0.56027198640068

Interpretation

Uncertain