SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11947
Pre Gene Modal
BGIBMGA014097
Annotation
30K_protein_20?_partial_[Bombyx_mori]
Full name
Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Location in the cell
Extracellular   Reliability : 1.543 PlasmaMembrane   Reliability : 1.638
 

Sequence

CDS
ATGTCGAATACTGATTTTGTTACAGCTATGGGGTTAAAAAAAATTGCTGTGATTTTAATGTGTGCGTTGGCTGTCAATGCCAACAGCATTGTCAATGATACCGGTAGCAGTACTGTAGCAGCTACCATCAGTAGCACCGACTCAACAAGCACTGAAGCAACTGTGAGTATCGAGAATATCAACTCAACTTTGGCAATGAGCGACATTGAGGCTAAGAACATAGAAGATGCGCTCTACAACGAAATCGTCTCAAGAGATTTCTACCAGGCGGTACATCGAACCGCGATAATGTATGGAGCAGGATGGGACTCCATGATTACGAATGTCGTTAACCGGCTCATCGATAACGGCCAGTCCCAACTAATTGATTACGCATACAAACTCACAGCTTCCAGGGGTACATTCATTGTCCGAGCACTCTTCCCTTCTGCGGTCCGACTGCACGAAGATCTGTTCTTCGTTAAAATAATCAGTTATAAGTACGACTTTGCTCTCAAGTTCGGTCTCGGCGCAGACTTCGCCGGTGACAAAACAGCCTATGGTGATTCTGACACCAGTACCAGGTTTAGAGTTACGTGGAAGTTTATCCCTTACTGGATAGAAGATAGGTTATATTTCAAGATTCGTCCAATAGATATTGCGTACTTCTTGAAACTTGGCAATTCGAGAGACAAAGACGGTGACCACGGAGCTTATGGATCTACTAACCACGATACAGACAGGCACTTGTGGTACCTCAAACCAGTGAGACATAATGGCAAGCTCCTGTTCTACATCATCAACAAGGAGTACGACGAACTCCTGAAACTCGGCCAATCAACGGACGTCGATGGTGATCGTACAGCTTATGGGCACTCCGAGAAGGACTTTAACCCAGATAAATTCGCTTGGTACATTAAACTGGTATAA
Protein
MSNTDFVTAMGLKKIAVILMCALAVNANSIVNDTGSSTVAATISSTDSTSTEATVSIENINSTLAMSDIEAKNIEDALYNEIVSRDFYQAVHRTAIMYGAGWDSMITNVVNRLIDNGQSQLIDYAYKLTASRGTFIVRALFPSAVRLHEDLFFVKIISYKYDFALKFGLGADFAGDKTAYGDSDTSTRFRVTWKFIPYWIEDRLYFKIRPIDIAYFLKLGNSRDKDGDHGAYGSTNHDTDRHLWYLKPVRHNGKLLFYIINKEYDELLKLGQSTDVDGDRTAYGHSEKDFNPDKFAWYIKLV

Summary

Miscellaneous
This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.
Similarity
Belongs to the 30 kDa lipoprotein family.
Keywords
Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  
Feature
chain  Microvitellogenin
EMBL
BABH01043627    BABH01022007    BABH01022005    BABH01022003    BABH01043629    BABH01022013    + More
BABH01022006    BABH01022004    JN977538    AFC87818.1    M28820    J03768    AM293331    CAL25136.1    BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    X54734    BABH01021998    JN977527    AFC87807.1    BABH01021941    JN977524    AFC87804.1    KM926620    AJI02615.1    BABH01022000    AY568957    AAS75435.1    AB158646    BAD07027.1    BABH01021937    JN977519    AFC87799.1    AB553283    BAJ04787.1    BABH01021929    BABH01021999    X54736    X07556    JN977544    AFC87824.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    JN977535    AFC87815.1    AB553284    BAJ04788.1    FJ214661    ACO35751.1    JN977529    AFC87809.1    X07554    EU024295    ABS71120.1    BABH01022014    X07553    BABH01035696    JN977543    AFC87823.1    BABH01021925    JN977523    AFC87803.1    BABH01021935    JN977525    AFC87805.1    BABH01021930    JN977521    AFC87801.1    AB098260    BAC82630.1    JN977522    AFC87802.1    BABH01021933    BABH01021934    BABH01021931    BABH01021932    MG799571    AXY55009.1    KZ149893    PZC78944.1    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    KQ460930    KPJ10718.1    X54735    CAA38532.1    KZ149940    PZC76929.1    MF497270    AUB45122.1    BABH01040631    JN977534    AFC87814.1    BABH01028980    KQ459582    KPI98870.1    NWSH01000017    PCG80765.1    X07555    MF497269    AUB45121.1    PZC78918.1    BABH01021921    JN977545    AFC87825.1    JN977536    AFC87816.1    AB436163    BAG70410.1    BABH01036437    JN977541    AFC87821.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    JN977540    AFC87820.1    NWSH01005147    PCG64400.1    JN977539    AFC87819.1    BABH01026782    JN977537    AFC87817.1    BABH01028979    JN977530    AFC87810.1    NWSH01000685    PCG74802.1    HM012807    ADQ89806.1    JN977533    AFC87813.1    BABH01026781    JN977532    AFC87812.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   
Pfam
PF03260   Lipoprotein_11
Interpro
IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       
SUPFAM
SSF50370   SSF50370       
Gene 3D
PDB
4IY9     E-value=2.69052e-34,     Score=362

Ontologies

Topology

Subcellular location
  
SignalP
Position:   1 - 27,         Likelihood:  0.838974
 
 
Length:
302
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.24734
Exp number, first 60 AAs:
2.19932
Total prob of N-in:
0.05457
outside
1  -  302
 
 

Population Genetic Test Statistics

Pi
240.623486
Theta
206.153473
Tajima's D
0.659039
CLR
0.10091
CSRT
0.56027198640068
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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