Gene

KWMTBOMO11945  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004385

Annotation

30K_protein_20?_partial_[Bombyx_mori]

Location

Bomo_Chr20(-):3926624-3927646      View in EpiBrowser

Full name

Low molecular mass 30 kDa lipoprotein 21G1       + More
Microvitellogenin      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Extracellular   Reliability : 1.126

CDS

ATGTGTGCGTTGGCTGTCAATGCCAACGTCATTGTCGATGATAACGGTAGCAGTACAGTAGCAGCTTCCATCAGTAGCACCGACTCACCAAGCACTGAAGCAACTGTGAGTATCGAGAATATCAACTCAACTTTGGCACTGAGCGACACTGCGGCTAAGAACATCGAAGATGCGCTCTACAACGAAGTCGTCACAAGAGATTTTGGCAAGGCCGTATATCGAACCGCGATATTGTATGGAGCAGGACGGGACTACATGATTACGAATGTCGTTAACCGGCTCATCGATAACGGCCAGTCCCAACTAATTGATTTCGCATACAAACTCACAGCTTCCAGTGGTAAATTCATTGTTCGAGAACTCTTCCCTTCTGCGGTCCGCTTGTACGAAGATATGGTCTTTGTTAAAATAGTCAGTTATAAGTACGACTTTGCTCTTAAGTACGGTCGCGGCGTAGATTTTGCCGAGGACAAAACAGCCTATGGTGATCCTGACACCAGTACCAGGTTTAGAGTTACGTGGAATTTTGTCCCTTACTGGATAGAAGATAGGGTATACTTCAAGATTCGTCCAATAGATATTGCGTACTTCTTGAAACTTGGCAATACGAGAGACAGAGACGGTGACCGCGGAGCTTTTGGATCTACTAACCACGACACAGACAGGCACTTGTGGTACCTCAAACCAGTGAGACATAATGGCAAGCTCCTGTTCTACATCATCAACAAGGAGTACGACGAACTCCTGAAACTCGGCCAGTCAACGGACGTCGATGGTGATCGTACAGCTTATGGGCACTCCGAGAAGGACTTTAACCCAGATAAATTCGCTTGGTACATTAAGCCTGTGTAA

Protein

MCALAVNANVIVDDNGSSTVAASISSTDSPSTEATVSIENINSTLALSDTAAKNIEDALYNEVVTRDFGKAVYRTAILYGAGRDYMITNVVNRLIDNGQSQLIDFAYKLTASSGKFIVRELFPSAVRLYEDMVFVKIVSYKYDFALKYGRGVDFAEDKTAYGDPDTSTRFRVTWNFVPYWIEDRVYFKIRPIDIAYFLKLGNTRDRDGDRGAFGSTNHDTDRHLWYLKPVRHNGKLLFYIINKEYDELLKLGQSTDVDGDRTAYGHSEKDFNPDKFAWYIKPV

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Signal   Secreted   3D-structure  

Feature

chain  Low molecular mass 30 kDa lipoprotein 21G1

Uniprot

H9J4E6   H9J4N4   H9JX32   H9J4N3   H9J4N1   H9JX33   + More
H9J4N5   H9J4E7   H9J4E8   H9B453   H9J4M3   Q00801   P19616   Q0VJU3   H9J4F5   H9J4M5   H9J4M4   Q05432   H9J4M8   A0A0B5Z504   H9J4M7   H9B459   H9B444   Q6Q0S8   Q75RW3   A7LIK7   H9J4N6   H9J4L1   P09338   H9JXA6   D4QGB9   H9J4F6   H9J4G3   Q00802   E5EVW2   D4QGC0   C7A8A3   P09336   H9B458   P09335   H9J4L5   H9J4F9   H9J4L6   H9B440   H9B450   Q76IB6   H9B443   P09334   C7A8A2   H9J4G4   Q17185   A0A385HW64   H9B436   H9B437   A0A194QYV5   H9JVX1   H9B449   H9JMX4   H9J4G1   H9J4G0   Q2PQU4   H9JJC0   A0A2W1BPF5   A0A2W1BZD4   A0A3G1LBE0   H9B454   H9B460   P09337   H9B445   A0A194Q636   H9B451   B5BSX5   H9B455   E5EVW3   H9B448   H9JJ72   H9JF68   A0A2A4K904   H9J4G5   A0A3G1LBD4   A0A2W1BV38   H9B447   A0A2A4JTT3   A0A2A4IYY5   H9JL03   A0A2H1WST8   H9B457  

Pubmed

19121390    26078299    1883839    2583514    2454229    1343778    + More
26126120    25379889    3342240    21457781    21514389    22948915    12871935    2002509    26354079    17112968    28756777    29175381    18840462   

EMBL

BABH01022007    BABH01022005    BABH01043627    BABH01022003    BABH01043629    BABH01022013    + More
BABH01022006    BABH01022004    JN977538    AFC87818.1    BABH01021988    X54734    M28820    J03768    AM293331    CAL25136.1    BABH01021941    JN977524    AFC87804.1    BABH01021998    JN977527    AFC87807.1    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01022000    KM926620    AJI02615.1    BABH01021999    JN977544    AFC87824.1    JN977529    AFC87809.1    AY568957    AAS75435.1    AB158646    BAD07027.1    EU024295    ABS71120.1    BABH01022014    BABH01021908    X07556    BABH01035696    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    BABH01021929    X54736    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AB553284    BAJ04788.1    FJ214661    ACO35751.1    X07554    JN977543    AFC87823.1    X07553    BABH01021935    BABH01021930    JN977525    AFC87805.1    JN977535    AFC87815.1    AB098260    BAC82630.1    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    BABH01021925    JN977523    AFC87803.1    X54735    CAA38532.1    MG799571    AXY55009.1    JN977521    AFC87801.1    JN977522    AFC87802.1    KQ460930    KPJ10718.1    BABH01040631    JN977534    AFC87814.1    BABH01028980    BABH01021931    BABH01021932    BABH01021933    BABH01021934    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01036437    JN977541    AFC87821.1    KZ149940    PZC76929.1    KZ149893    PZC78944.1    MF497270    AUB45122.1    JN977539    AFC87819.1    JN977545    AFC87825.1    X07555    BABH01028979    JN977530    AFC87810.1    KQ459582    KPI98870.1    JN977536    AFC87816.1    AB436163    BAG70410.1    JN977540    AFC87820.1    HM012807    ADQ89806.1    JN977533    AFC87813.1    BABH01026782    JN977537    AFC87817.1    NWSH01000017    PCG80765.1    BABH01021921    MF497269    AUB45121.1    PZC78918.1    BABH01026781    JN977532    AFC87812.1    NWSH01000685    PCG74802.1    NWSH01005147    PCG64400.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220   

PRIDE

H9J4E6    H9J4N4    H9JX32    H9J4N3    H9J4N1    H9JX33    + More
H9J4N5    H9J4E7    H9J4E8    H9B453    H9J4M3    Q00801    H9J4F5    H9J4M5    H9J4M4    Q05432    H9J4M8    H9J4M7    H9B459    H9B444    Q6Q0S8    Q75RW3    A7LIK7    H9J4N6    H9J4L1    P09338    H9JXA6    D4QGB9    H9J4F6    H9J4G3    Q00802    E5EVW2    D4QGC0    C7A8A3    P09336    H9B458    P09335    H9J4L5    H9J4F9    H9J4L6    H9B440    H9B450    P09334    C7A8A2    H9J4G4    Q17185    H9B436    H9B437    H9B449    H9JMX4    H9J4G1    H9J4G0    Q2PQU4    H9JJC0    H9B454    H9B460    P09337    H9B445    H9B451    B5BSX5    H9B455    E5EVW3    H9B448    H9JJ72    H9JF68    H9J4G5    H9B447    H9JL03    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4E6   H9J4N4   H9JX32   H9J4N3   H9J4N1   H9JX33   + More
H9J4N5   H9J4E7   H9J4E8   H9B453   H9J4M3   Q00801   P19616   Q0VJU3   H9J4F5   H9J4M5   H9J4M4   Q05432   H9J4M8   A0A0B5Z504   H9J4M7   H9B459   H9B444   Q6Q0S8   Q75RW3   A7LIK7   H9J4N6   H9J4L1   P09338   H9JXA6   D4QGB9   H9J4F6   H9J4G3   Q00802   E5EVW2   D4QGC0   C7A8A3   P09336   H9B458   P09335   H9J4L5   H9J4F9   H9J4L6   H9B440   H9B450   Q76IB6   H9B443   P09334   C7A8A2   H9J4G4   Q17185   A0A385HW64   H9B436   H9B437   A0A194QYV5   H9JVX1   H9B449   H9JMX4   H9J4G1   H9J4G0   Q2PQU4   H9JJC0   A0A2W1BPF5   A0A2W1BZD4   A0A3G1LBE0   H9B454   H9B460   P09337   H9B445   A0A194Q636   H9B451   B5BSX5   H9B455   E5EVW3   H9B448   H9JJ72   H9JF68   A0A2A4K904   H9J4G5   A0A3G1LBD4   A0A2W1BV38   H9B447   A0A2A4JTT3   A0A2A4IYY5   H9JL03   A0A2H1WST8   H9B457  

PDB

4PC4     E-value=3.12989e-35,     Score=370

KEGG

101737804    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

Length:

283

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00447999999999999

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.04796

outside

1  -  283

 

 

Pi

383.181877

Theta

228.083405

Tajima's D

2.141475

CLR

0.511299

CSRT

0.905804709764512

Interpretation

Uncertain