SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11944
Pre Gene Modal
BGIBMGA014098
Annotation
30K_protein_20?_partial_[Bombyx_mori]
Full name
Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Location in the cell
PlasmaMembrane   Reliability : 2.116
 

Sequence

CDS
ATGGAGCTCAAAGGAGTTGTGCTACTAATGTGTGTGCTGGTTGCCAGTGCCAATAGCATTGTCAAGGAAGCCACCGACAACATTGCAGCCGTTGAGACAGTGAATTCGACCAGCGTCGTCAGCACCGTTGGCTCTGTAAGCACTGAAGCAACCGTGACCCTCGACAACGCCACCAGCAATCAGTCACCTTCCATGAGCGTCGTCAGTAAGCAACGCGAAAATAAACTCTACAATTTTATCGTGGCAAGGAAATTTGATGAAGCTGTCGAGAACACAATTTCCTTGTATGGCGCAGGCGGGTGCAATATCATCGAACAGGTCATTGAACGGTTGTTCGACGAGGGTCAATCTATAGTATTTGATTACTCCTACAAACTCTCAATCGCCGGGGCCCGGTACGTCGCACGCAGTTGCTTCCCTGCGGCAATCAGAATCCACGAAAGTTTGGTATTCGCGAAAGTGATTAACAAGAGGGACGGGTACGCTCTTACGTACAGTAGACGGGTGGACTCCGATGGTGACCGAAGAATTTTAGGCGATCGTAACACTCAAAACAGAATGGATATTACATGGTGGTTCGTCCCTTATTGGCTGGGAGACAGGCTTTATTTCCAGATGCGCCCTCTTAGAATGGCTATGTTCTTAAAATTAGGAAACACTAGAGACGAAGACGACGACCATACCGGTTATATATCTGACGACCACGCCACGAACAGGCACTTCTGGACCATACAGCCGGTGAAGCACAATGGCGAGCTCCTGTTCTACATCATCAACCGGGAGTACGATGAGCTTCTTAAATTCGGTCAATCAACCAAATACGACGGATACCGCATTGGTTATGGCCACTCGACGAGGGACTTCAACCCGAATAAGTTCTCTTGGTACATTGATGTAATATGA
Protein
MELKGVVLLMCVLVASANSIVKEATDNIAAVETVNSTSVVSTVGSVSTEATVTLDNATSNQSPSMSVVSKQRENKLYNFIVARKFDEAVENTISLYGAGGCNIIEQVIERLFDEGQSIVFDYSYKLSIAGARYVARSCFPAAIRIHESLVFAKVINKRDGYALTYSRRVDSDGDRRILGDRNTQNRMDITWWFVPYWLGDRLYFQMRPLRMAMFLKLGNTRDEDDDHTGYISDDHATNRHFWTIQPVKHNGELLFYIINREYDELLKFGQSTKYDGYRIGYGHSTRDFNPNKFSWYIDVI

Summary

Miscellaneous
This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.
Similarity
Belongs to the 30 kDa lipoprotein family.
Keywords
Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  
Feature
chain  Microvitellogenin
EMBL
BABH01043629    BABH01022006    BABH01022007    BABH01022013    BABH01022004    JN977538    + More
AFC87818.1    BABH01022003    BABH01022005    BABH01043627    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01022000    M28820    J03768    BABH01022014    AM293331    CAL25136.1    AY568957    AAS75435.1    JN977544    AFC87824.1    X54734    BABH01021998    JN977527    AFC87807.1    KM926620    AJI02615.1    BABH01035696    BABH01021941    JN977524    AFC87804.1    BABH01021908    JN977521    AFC87801.1    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    FJ214661    ACO35751.1    X54736    JN977522    AFC87802.1    AB553284    BAJ04788.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    BABH01021930    BABH01021931    BABH01021932    X07554    BABH01021999    BABH01021933    BABH01021934    BABH01021988    AB158646    BAD07027.1    BABH01021925    HM012807    ADQ89806.1    JN977533    AFC87813.1    BABH01021929    JN977535    AFC87815.1    BABH01040631    MG799571    AXY55009.1    X07556    JN977528    AFC87808.1    X07552    JN977543    AFC87823.1    FJ214660    ACO35750.1    X54735    CAA38532.1    JN977529    AFC87809.1    X07553    EU024295    ABS71120.1    JN977525    AFC87805.1    BABH01021935    JN977523    AFC87803.1    KZ149940    PZC76929.1    AB098260    BAC82630.1    JN977534    AFC87814.1    BABH01028980    JN977545    AFC87825.1    X07555    BABH01036437    JN977541    AFC87821.1    MF497269    AUB45121.1    KQ460930    KPJ10718.1    AB436163    BAG70410.1    KZ149893    PZC78918.1    PZC78944.1    NWSH01000017    PCG80765.1    BABH01026782    JN977537    AFC87817.1    JN977540    AFC87820.1    JN977536    AFC87816.1    MF497270    AUB45122.1    JN977539    AFC87819.1    BABH01028979    JN977530    AFC87810.1    NWSH01005147    PCG64400.1    BABH01021921    BABH01026781    JN977532    AFC87812.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    KQ459582    KPI98870.1    NWSH01000685    PCG74802.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   
Pfam
PF03260   Lipoprotein_11
Interpro
IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       
SUPFAM
SSF50370   SSF50370       
Gene 3D
PDB
4IY9     E-value=7.37988e-29,     Score=315

Ontologies

Topology

Subcellular location
  
SignalP
Position:   1 - 17,         Likelihood:  0.990827
 
 
Length:
300
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0929100000000001
Exp number, first 60 AAs:
0.05411
Total prob of N-in:
0.00774
outside
1  -  300
 
 

Population Genetic Test Statistics

Pi
599.00924
Theta
233.717373
Tajima's D
4.926296
CLR
141.265335
CSRT
0.999950002499875
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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