Gene

KWMTBOMO11943

Pre Gene Modal

BGIBMGA004386

Annotation

30K_protein_20?_partial_[Bombyx_mori]

Location

Bomo_Chr20(-):3921592-3922686      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

PlasmaMembrane   Reliability : 1.781

CDS

ATGGAGCTCAAAGGAGTTGTGCTACTAATGTATGTGCTGGCTGCCAGTGCCAATAGCATTGTCAAGGAAGCCACCGACAACATTGCAGCCGTTGAGACAGTGAATTCGACCAGCGTCGTCAGCACCGTTGGCTCTGCAAGGACTGAAGCAACCGTGACCCTCGACAACGCCACCAGCAATCAGTCACCTTCCACGAGCGTTGTCAGTAAGCAACGCGAAAATAAACTCTACAATTTGATCGTGGCAAGGAAATTTAATGAAGCCGTCGAGAACACCATTTGCTTGTATGGCGCAGGCGGGTGCAATATCATCGAACGGGTCATTGAACGGTTATTCGACGAGGGTCAATCTATAGTATTTGATTACTCCTATAAAGTCTCAAACGTCGGGGCCCGGTACATCGCACGCAGTTGCTTCCCTGCGGCAATCAGAATCCACGAAAGTTTGGTATTCGCAAAAGTGATTAACAAGAGGGACGGGTACGCTCTTACGTACAGTAGACGGATGGACTCCGACGGTGACCGCAGAATTTTAGGCGATCGTAACACTGAAACCAGAATGGATATTATATGGCGGTTCGTCCCTTATTGGCTGGGAGACAGGCTTTGTTTCAAGATGCGCCCTGTTAGAATGGCTATGTTCTTAAAATTAGGAAACACTAGAGACGAAGACGACGACCATACCGCTTATATATCTGACGACCACGCCACGAACAGCCACTTGTGGACCATACAACCGGTGAAGCACAATGGCGAGCTCCTGTTCTACATCATCAACCGGGAGTACGACGAACTTCTTAAATTCGGTCAAGCAACCGAACACGACGGATACCGCATTGGTTATGGCCACTCGACGAGGGACTTCAACCCGAATAAGTTCTCTTGGTACATTGATGTAATATGA

Protein

MELKGVVLLMYVLAASANSIVKEATDNIAAVETVNSTSVVSTVGSARTEATVTLDNATSNQSPSTSVVSKQRENKLYNLIVARKFNEAVENTICLYGAGGCNIIERVIERLFDEGQSIVFDYSYKVSNVGARYIARSCFPAAIRIHESLVFAKVINKRDGYALTYSRRMDSDGDRRILGDRNTETRMDIIWRFVPYWLGDRLCFKMRPVRMAMFLKLGNTRDEDDDHTAYISDDHATNSHLWTIQPVKHNGELLFYIINREYDELLKFGQATEHDGYRIGYGHSTRDFNPNKFSWYIDVI

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   3D-structure   Complete proteome   Lipoprotein   Reference proteome   Secreted  

Feature

chain  Microvitellogenin

Uniprot

H9J4E7   H9JX33   H9J4N5   H9J4E8   H9B453   H9J4N1   + More
H9J4N4   H9J4N3   H9JX32   H9J4E6   H9J4M8   H9J4M4   Q05432   P19616   Q0VJU3   H9J4M5   A0A0B5Z504   Q6Q0S8   H9B436   H9B437   H9JXA6   H9J4L1   H9J4N6   H9J4G1   H9B459   H9J4G0   D4QGB9   C7A8A3   H9J4M7   H9J4F6   Q00802   D4QGC0   E5EVW2   H9J4M3   P09336   Q75RW3   Q00801   H9B448   E5EVW3   H9J4F5   A0A385HW64   H9J4L5   H9B450   H9JVX1   H9J4G3   H9B443   P09334   C7A8A2   H9B458   Q17185   A0A2W1BPF5   Q76IB6   A0A194QYV5   P09338   H9B460   H9J4G4   H9B444   H9JJC0   A0A3G1LBD4   A0A2W1BZD4   H9J4L6   B5BSX5   A0A3G1LBE0   H9B449   H9JMX4   A0A2W1BV38   A7LIK7   H9JF68   P09335   H9B445   H9B454   A0A2A4IYY5   H9B451   A0A2A4K904   H9B447   H9B455   H9J4F9   H9B440   Q2PQU4   H9JJ72   H9J4G5   A0A194Q636   P09337   A0A2A4JTT3   A0A2H1WST8   H9B457  

Pubmed

19121390    26078299    1343778    2583514    2454229    26126120    + More
1883839    21457781    21514389    22948915    3342240    2002509    28756777    12871935    26354079    29175381    18840462    25379889    17112968   

EMBL

BABH01022006    BABH01022007    BABH01043629    BABH01022013    BABH01022004    JN977538    + More
AFC87818.1    BABH01022003    BABH01022005    BABH01043627    BABH01022000    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    M28820    J03768    AM293331    CAL25136.1    BABH01021998    JN977527    AFC87807.1    KM926620    AJI02615.1    AY568957    AAS75435.1    JN977521    AFC87801.1    JN977522    AFC87802.1    BABH01035696    BABH01021908    BABH01022014    BABH01021930    BABH01021931    BABH01021932    JN977544    AFC87824.1    BABH01021933    BABH01021934    AB553283    BAJ04787.1    FJ214661    ACO35751.1    BABH01021999    BABH01021937    JN977519    AFC87799.1    X54736    AB553284    BAJ04788.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    BABH01021988    X07554    AB158646    BAD07027.1    X54734    JN977533    AFC87813.1    BABH01021925    HM012807    ADQ89806.1    BABH01021941    JN977524    AFC87804.1    MG799571    AXY55009.1    BABH01021929    JN977535    AFC87815.1    BABH01040631    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    JN977543    AFC87823.1    X54735    CAA38532.1    KZ149940    PZC76929.1    AB098260    BAC82630.1    KQ460930    KPJ10718.1    X07556    JN977545    AFC87825.1    JN977523    AFC87803.1    JN977529    AFC87809.1    BABH01036437    JN977541    AFC87821.1    MF497269    AUB45121.1    KZ149893    PZC78944.1    AB436163    BAG70410.1    MF497270    AUB45122.1    JN977534    AFC87814.1    BABH01028980    PZC78918.1    EU024295    ABS71120.1    BABH01026782    JN977537    AFC87817.1    X07553    BABH01028979    JN977530    AFC87810.1    JN977539    AFC87819.1    NWSH01005147    PCG64400.1    JN977536    AFC87816.1    NWSH01000017    PCG80765.1    BABH01026781    JN977532    AFC87812.1    JN977540    AFC87820.1    BABH01021935    JN977525    AFC87805.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01021921    KQ459582    KPI98870.1    X07555    NWSH01000685    PCG74802.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268   

PRIDE

H9J4E7    H9JX33    H9J4N5    H9J4E8    H9B453    H9J4N1    + More
H9J4N4    H9J4N3    H9JX32    H9J4E6    H9J4M8    H9J4M4    Q05432    H9J4M5    Q6Q0S8    H9B436    H9B437    H9JXA6    H9J4L1    H9J4N6    H9J4G1    H9B459    H9J4G0    D4QGB9    C7A8A3    H9J4M7    H9J4F6    Q00802    D4QGC0    E5EVW2    H9J4M3    P09336    Q75RW3    Q00801    H9B448    E5EVW3    H9J4F5    H9J4L5    H9B450    H9J4G3    P09334    C7A8A2    H9B458    Q17185    P09338    H9B460    H9J4G4    H9B444    H9JJC0    H9J4L6    B5BSX5    H9B449    H9JMX4    A7LIK7    H9JF68    P09335    H9B445    H9B454    H9B451    H9B447    H9B455    H9J4F9    H9B440    Q2PQU4    H9JJ72    H9J4G5    P09337    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4E7   H9JX33   H9J4N5   H9J4E8   H9B453   H9J4N1   + More
H9J4N4   H9J4N3   H9JX32   H9J4E6   H9J4M8   H9J4M4   Q05432   P19616   Q0VJU3   H9J4M5   A0A0B5Z504   Q6Q0S8   H9B436   H9B437   H9JXA6   H9J4L1   H9J4N6   H9J4G1   H9B459   H9J4G0   D4QGB9   C7A8A3   H9J4M7   H9J4F6   Q00802   D4QGC0   E5EVW2   H9J4M3   P09336   Q75RW3   Q00801   H9B448   E5EVW3   H9J4F5   A0A385HW64   H9J4L5   H9B450   H9JVX1   H9J4G3   H9B443   P09334   C7A8A2   H9B458   Q17185   A0A2W1BPF5   Q76IB6   A0A194QYV5   P09338   H9B460   H9J4G4   H9B444   H9JJC0   A0A3G1LBD4   A0A2W1BZD4   H9J4L6   B5BSX5   A0A3G1LBE0   H9B449   H9JMX4   A0A2W1BV38   A7LIK7   H9JF68   P09335   H9B445   H9B454   A0A2A4IYY5   H9B451   A0A2A4K904   H9B447   H9B455   H9J4F9   H9B440   Q2PQU4   H9JJ72   H9J4G5   A0A194Q636   P09337   A0A2A4JTT3   A0A2H1WST8   H9B457  

PDB

4IY9     E-value=2.27702e-27,     Score=303

KEGG

101737529    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 17,         Likelihood:  0.969784

 

 

Length:

300

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0389000000000001

Exp number, first 60 AAs:

0.03611

Total prob of N-in:

0.00653

outside

1  -  300

 

 

Pi

17.136476

Theta

30.841889

Tajima's D

-0.5616

CLR

12.605089

CSRT

0.229338533073346

Interpretation

Uncertain