Gene

KWMTBOMO11942

Pre Gene Modal

BGIBMGA004474

Annotation

30K_protein_20?_partial_[Bombyx_mori]

Location

Bomo_Chr20(+):3912157-3913139      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Extracellular   Reliability : 1.873

CDS

ATGTCGAATATTGGTTTTGTTACAGCTATGGGGCTCAAAGAATTTGCTGTGGTTTTAATGTGTGCGCTGGCTGCCAATGCCAACGTCATCGGTAGCAGTACTGTAGCAGCTACCATTAGTAGCACCGACTCACCAAGCACTGAAGCAACTGTGAATATCGAGAATATCAACTCAACTTTGGCACTGAGCGACACTGCGGCTAAGAACATCGAAGATGCGCTCTACAATGAAGTCGTCGCAAGAGATTTTGGCAAGGCCGTATATCGAACCGCGATATTGTATGGAGCAGGACGGGACTACATAATTACGAATGTCGTTAACCGGCTCATCGATAACGGCAAGTCCCAGCTAATTGATTACGCATACAAACTCACAGCTTCCAGGGGTACATTCATTGTCCGAGCACTCTTCCCTTCTGCGGTCCGACTACACGAAGATCTGTTCTTCGTCAAAATAATCAGTTATAAGTACGACTTTGCTCTTAAGTATGGTCTTGGCGAGGATTTCGATGAGGATAGAACGGCCTACGGCGATTCCGATACCAGCACCAGGTTTAGAGTTACATGGAAGTTTGTCCCATTCTGGATAGGCGACAGGGTATACTTCAAGATTCGTCCTATAGATATTGCGTACTTCTTGAAACTTGGCAATTCGAGAGACAAAGACGGTGACCACGGAGCTTATGGATCTACTAACCACGACACAGACAGGCACTTGTGGTACGTCAAACCAGTGAGACATAATGGCAAGCTCCTGTTCTACATCATCAACAAGGAGTACGACGAACTCCTGAAACTCGGCCAATCAACGGACAGCGATGGTGATCGTACAGCTTATGGGCACTCCACTAGGGACTTTAATCCGGACAAATTCGCTTGGTACATTAAACTGGTATAA

Protein

MSNIGFVTAMGLKEFAVVLMCALAANANVIGSSTVAATISSTDSPSTEATVNIENINSTLALSDTAAKNIEDALYNEVVARDFGKAVYRTAILYGAGRDYIITNVVNRLIDNGKSQLIDYAYKLTASRGTFIVRALFPSAVRLHEDLFFVKIISYKYDFALKYGLGEDFDEDRTAYGDSDTSTRFRVTWKFVPFWIGDRVYFKIRPIDIAYFLKLGNSRDKDGDHGAYGSTNHDTDRHLWYVKPVRHNGKLLFYIINKEYDELLKLGQSTDSDGDRTAYGHSTRDFNPDKFAWYIKLV

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  

Feature

chain  Microvitellogenin

Uniprot

H9J4N4   H9J4E6   H9J4N3   H9JX32   H9J4N1   H9J4N5   + More
H9J4E7   H9JX33   H9J4E8   H9B453   P19616   Q0VJU3   H9J4M3   H9J4M4   Q05432   H9J4M5   H9J4M8   H9B459   Q00801   A0A0B5Z504   H9J4N6   H9J4F5   H9JXA6   Q6Q0S8   H9J4M7   Q75RW3   H9J4F6   D4QGB9   H9J4L5   Q00802   C7A8A3   H9J4L1   P09336   H9B450   H9B444   E5EVW2   D4QGC0   A7LIK7   H9J4G3   H9J4G4   H9B436   H9B458   P09338   H9B437   H9J4G1   H9J4G0   P09335   H9B440   H9J4F9   H9J4L6   H9B443   P09334   C7A8A2   Q17185   H9JVX1   A0A385HW64   Q76IB6   A0A2W1BPF5   A0A194QYV5   A0A2W1BZD4   H9B449   A0A2A4K904   H9JMX4   A0A3G1LBE0   H9B460   H9B451   A0A194Q636   H9B455   P09337   Q2PQU4   B5BSX5   H9JJC0   H9JJ72   H9J4G5   A0A3G1LBD4   H9JF68   A0A2A4JTT3   A0A2A4IYY5   H9B454   A0A2W1BV38   H9B445   H9B448   E5EVW3   H9B447   H9J4G2   A0A2H1WST8   H9B457  

Pubmed

19121390    26078299    2583514    2454229    1343778    1883839    + More
26126120    3342240    21457781    21514389    22948915    25379889    2002509    12871935    28756777    26354079    29175381    17112968    18840462   

EMBL

BABH01022005    BABH01022007    BABH01022003    BABH01043627    BABH01022013    BABH01022006    + More
BABH01043629    BABH01022004    JN977538    AFC87818.1    M28820    J03768    AM293331    CAL25136.1    BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021998    JN977527    AFC87807.1    BABH01022000    JN977544    AFC87824.1    X54734    KM926620    AJI02615.1    BABH01022014    BABH01021941    JN977524    AFC87804.1    BABH01035696    AY568957    AAS75435.1    BABH01021999    AB158646    BAD07027.1    BABH01021937    JN977519    AFC87799.1    AB553283    BAJ04787.1    BABH01021929    X54736    FJ214661    ACO35751.1    BABH01021908    X07554    JN977535    AFC87815.1    JN977529    AFC87809.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AB553284    BAJ04788.1    EU024295    ABS71120.1    BABH01021925    JN977523    AFC87803.1    JN977521    AFC87801.1    JN977543    AFC87823.1    X07556    JN977522    AFC87802.1    BABH01021930    BABH01021931    BABH01021932    BABH01021933    BABH01021934    X07553    JN977525    AFC87805.1    BABH01021935    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    X54735    CAA38532.1    BABH01040631    MG799571    AXY55009.1    AB098260    BAC82630.1    KZ149940    PZC76929.1    KQ460930    KPJ10718.1    KZ149893    PZC78944.1    JN977534    AFC87814.1    NWSH01000017    PCG80765.1    BABH01028980    MF497270    AUB45122.1    JN977545    AFC87825.1    JN977536    AFC87816.1    KQ459582    KPI98870.1    JN977540    AFC87820.1    X07555    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    AB436163    BAG70410.1    BABH01036437    JN977541    AFC87821.1    BABH01021921    MF497269    AUB45121.1    BABH01026782    JN977537    AFC87817.1    NWSH01000685    PCG74802.1    NWSH01005147    PCG64400.1    JN977539    AFC87819.1    PZC78918.1    BABH01028979    JN977530    AFC87810.1    JN977533    AFC87813.1    HM012807    ADQ89806.1    BABH01026781    JN977532    AFC87812.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268   

PRIDE

H9J4N4    H9J4E6    H9J4N3    H9JX32    H9J4N1    H9J4N5    + More
H9J4E7    H9JX33    H9J4E8    H9B453    H9J4M3    H9J4M4    Q05432    H9J4M5    H9J4M8    H9B459    Q00801    H9J4N6    H9J4F5    H9JXA6    Q6Q0S8    H9J4M7    Q75RW3    H9J4F6    D4QGB9    H9J4L5    Q00802    C7A8A3    H9J4L1    P09336    H9B450    H9B444    E5EVW2    D4QGC0    A7LIK7    H9J4G3    H9J4G4    H9B436    H9B458    P09338    H9B437    H9J4G1    H9J4G0    P09335    H9B440    H9J4F9    H9J4L6    P09334    C7A8A2    Q17185    H9B449    H9JMX4    H9B460    H9B451    H9B455    P09337    Q2PQU4    B5BSX5    H9JJC0    H9JJ72    H9J4G5    H9JF68    H9B454    H9B445    H9B448    E5EVW3    H9B447    H9J4G2    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4N4   H9J4E6   H9J4N3   H9JX32   H9J4N1   H9J4N5   + More
H9J4E7   H9JX33   H9J4E8   H9B453   P19616   Q0VJU3   H9J4M3   H9J4M4   Q05432   H9J4M5   H9J4M8   H9B459   Q00801   A0A0B5Z504   H9J4N6   H9J4F5   H9JXA6   Q6Q0S8   H9J4M7   Q75RW3   H9J4F6   D4QGB9   H9J4L5   Q00802   C7A8A3   H9J4L1   P09336   H9B450   H9B444   E5EVW2   D4QGC0   A7LIK7   H9J4G3   H9J4G4   H9B436   H9B458   P09338   H9B437   H9J4G1   H9J4G0   P09335   H9B440   H9J4F9   H9J4L6   H9B443   P09334   C7A8A2   Q17185   H9JVX1   A0A385HW64   Q76IB6   A0A2W1BPF5   A0A194QYV5   A0A2W1BZD4   H9B449   A0A2A4K904   H9JMX4   A0A3G1LBE0   H9B460   H9B451   A0A194Q636   H9B455   P09337   Q2PQU4   B5BSX5   H9JJC0   H9JJ72   H9J4G5   A0A3G1LBD4   H9JF68   A0A2A4JTT3   A0A2A4IYY5   H9B454   A0A2W1BV38   H9B445   H9B448   E5EVW3   H9B447   H9J4G2   A0A2H1WST8   H9B457  

PDB

4IY9     E-value=1.74976e-36,     Score=381

KEGG

101737529    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 27,         Likelihood:  0.633641

 

 

Length:

298

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.62795

Exp number, first 60 AAs:

3.57375

Total prob of N-in:

0.05489

outside

1  -  298

 

 

Pi

271.300306

Theta

183.135075

Tajima's D

1.514806

CLR

0

CSRT

0.784560771961402

Interpretation

Uncertain