Gene

KWMTBOMO11938

Pre Gene Modal

BGIBMGA004471

Annotation

30K_protein_20?_partial_[Bombyx_mori]

Location

Bomo_Chr20(+):3880967-3882029      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-6      

Location in the cell

Extracellular   Reliability : 1.453 PlasmaMembrane   Reliability : 1.033

CDS

ATGTCACTTAATGAAATCAGGAACATTGGTTTAATTACAGCTATGGGGCTCAAAGAATTTGCTGTGATTTTGATGTGTGCACTGGCTGCCAATGCCAACATCATTATCGATGATACTGGTAGTACAGTAGCAGCTACCGTCAGTAGCACCGACTCATCAAGCACTGAAGCAACTGTGAGTGAGAAGATCAACCCATCTTTGGCATCGAGCGACATTGCTAGTACCTCCGCTAAGAACATCGAAGATGAGCTCTACAACGAAGTCGTCTCAAGAGATTTCGACAAGGCGGTATATCGAACCGCGCTATTGTATGGAGCAGGACACGACTCTATTATTTCGAATGTCGTTCACCGGCTCATCAATGACGGCCAGTCCCAAATATTTGATTACGCATACAAACTCACAGCTTCCAGGGGTACATTCATTGTCCGAGCACTTTTCCCTATTGAGATACGAATGCACGAAGACCTGCTGTTCGTTAAAATAATTAGCTATAAGTACGATTTTGCTCTCAAATACAGTCGTGGCGTAGACTTCGCCGGTGATAAAAAAGCCTATGGTGATTCTGACACCAGTACCAGGTTTAAAGTTACGTGGAAGTTTGTTCCTTACTGGATAGGCGATAGAGTATACTTCAAGATTCGTCCAATAGATATTGCGTACTTTTTGAAGCTTGGGAATACGAGAGACAGAGACGGTGACCACGGAGCTTATGGATCTACTAACCACGACACAGACAGGCACTTGTGGTACGTCAAGCCAGTTAGACATAATGGCAAGCTTCTGTTCTATATCATCAACAAGGAGTACGACGAACTCTTGAAGCTCGGAAAATCAAAGGACTGGGATGGTGATCGTGTAGCCTATGGGCACTCGGAAAAGGACTTTAACCCAGACAAATTCGCTTGGTACATTAAATTGATATAA

Protein

MSLNEIRNIGLITAMGLKEFAVILMCALAANANIIIDDTGSTVAATVSSTDSSSTEATVSEKINPSLASSDIASTSAKNIEDELYNEVVSRDFDKAVYRTALLYGAGHDSIISNVVHRLINDGQSQIFDYAYKLTASRGTFIVRALFPIEIRMHEDLLFVKIISYKYDFALKYSRGVDFAGDKKAYGDSDTSTRFKVTWKFVPYWIGDRVYFKIRPIDIAYFLKLGNTRDRDGDHGAYGSTNHDTDRHLWYVKPVRHNGKLLFYIINKEYDELLKLGKSKDWDGDRVAYGHSEKDFNPDKFAWYIKLI

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   Secreted   3D-structure  

Feature

chain  Microvitellogenin

Uniprot

H9J4N1   H9J4N4   H9J4E6   H9JX32   H9J4N3   H9JX33   + More
H9J4E7   H9J4N5   H9J4E8   H9B453   P19616   Q0VJU3   H9J4M8   Q00801   H9J4M3   H9J4M4   Q05432   H9J4F5   A0A0B5Z504   H9J4L1   H9J4M5   H9J4M7   H9B459   H9J4N6   Q6Q0S8   P09338   H9B444   H9J4F6   D4QGB9   H9J4G3   A7LIK7   E5EVW2   D4QGC0   Q75RW3   P09335   C7A8A3   H9JXA6   Q00802   P09336   H9B458   H9J4L6   H9J4F9   H9B440   H9J4L5   H9J4G4   H9B450   H9B436   H9B437   H9J4G1   H9J4G0   H9B443   C7A8A2   P09334   Q17185   H9B449   H9JMX4   H9B455   A0A194QYV5   Q76IB6   H9JJ72   H9B460   A0A2W1BZD4   H9JVX1   H9B451   A0A385HW64   A0A2W1BPF5   A0A3G1LBE0   H9B448   B5BSX5   E5EVW3   H9JF68   A0A2A4IYY5   A0A2A4K904   H9JJC0   A0A194Q636   A0A3G1LBD4   A0A2W1BV38   H9B454   H9B445   Q2PQU4   A0A2A4JTT3   H9J4G5   H9JL03   H9B447   A0A2H1WST8   H9B457  

Pubmed

19121390    26078299    2583514    2454229    1883839    1343778    + More
26126120    3342240    25379889    21457781    21514389    22948915    2002509    26354079    12871935    28756777    29175381    18840462    17112968   

EMBL

BABH01022003    BABH01022005    BABH01022007    BABH01043627    BABH01043629    BABH01022006    + More
BABH01022013    BABH01022004    JN977538    AFC87818.1    M28820    J03768    AM293331    CAL25136.1    BABH01022000    X54734    BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021941    JN977524    AFC87804.1    KM926620    AJI02615.1    BABH01021908    BABH01021998    JN977527    AFC87807.1    BABH01021999    JN977544    AFC87824.1    BABH01022014    AY568957    AAS75435.1    X07556    JN977529    AFC87809.1    BABH01021937    JN977519    AFC87799.1    AB553283    BAJ04787.1    BABH01021929    EU024295    ABS71120.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AB553284    BAJ04788.1    AB158646    BAD07027.1    X07553    FJ214661    ACO35751.1    BABH01035696    X54736    X07554    JN977543    AFC87823.1    BABH01021930    BABH01021935    JN977525    AFC87805.1    BABH01021925    JN977523    AFC87803.1    JN977535    AFC87815.1    JN977521    AFC87801.1    JN977522    AFC87802.1    BABH01021931    BABH01021932    BABH01021933    BABH01021934    JN977528    AFC87808.1    FJ214660    ACO35750.1    X07552    X54735    CAA38532.1    JN977534    AFC87814.1    BABH01028980    JN977540    AFC87820.1    KQ460930    KPJ10718.1    AB098260    BAC82630.1    BABH01036437    JN977545    AFC87825.1    KZ149893    PZC78944.1    BABH01040631    JN977536    AFC87816.1    MG799571    AXY55009.1    KZ149940    PZC76929.1    MF497270    AUB45122.1    JN977533    AFC87813.1    AB436163    BAG70410.1    HM012807    ADQ89806.1    BABH01026782    JN977537    AFC87817.1    NWSH01005147    PCG64400.1    NWSH01000017    PCG80765.1    JN977541    AFC87821.1    KQ459582    KPI98870.1    MF497269    AUB45121.1    PZC78918.1    JN977539    AFC87819.1    BABH01028979    JN977530    AFC87810.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    NWSH01000685    PCG74802.1    BABH01021921    BABH01026781    JN977532    AFC87812.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268   

PRIDE

H9J4N1    H9J4N4    H9J4E6    H9JX32    H9J4N3    H9JX33    + More
H9J4E7    H9J4N5    H9J4E8    H9B453    H9J4M8    Q00801    H9J4M3    H9J4M4    Q05432    H9J4F5    H9J4L1    H9J4M5    H9J4M7    H9B459    H9J4N6    Q6Q0S8    P09338    H9B444    H9J4F6    D4QGB9    H9J4G3    A7LIK7    E5EVW2    D4QGC0    Q75RW3    P09335    C7A8A3    H9JXA6    Q00802    P09336    H9B458    H9J4L6    H9J4F9    H9B440    H9J4L5    H9J4G4    H9B450    H9B436    H9B437    H9J4G1    H9J4G0    C7A8A2    P09334    Q17185    H9B449    H9JMX4    H9B455    H9JJ72    H9B460    H9B451    H9B448    B5BSX5    E5EVW3    H9JF68    H9JJC0    H9B454    H9B445    Q2PQU4    H9J4G5    H9JL03    H9B447    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4N1   H9J4N4   H9J4E6   H9JX32   H9J4N3   H9JX33   + More
H9J4E7   H9J4N5   H9J4E8   H9B453   P19616   Q0VJU3   H9J4M8   Q00801   H9J4M3   H9J4M4   Q05432   H9J4F5   A0A0B5Z504   H9J4L1   H9J4M5   H9J4M7   H9B459   H9J4N6   Q6Q0S8   P09338   H9B444   H9J4F6   D4QGB9   H9J4G3   A7LIK7   E5EVW2   D4QGC0   Q75RW3   P09335   C7A8A3   H9JXA6   Q00802   P09336   H9B458   H9J4L6   H9J4F9   H9B440   H9J4L5   H9J4G4   H9B450   H9B436   H9B437   H9J4G1   H9J4G0   H9B443   C7A8A2   P09334   Q17185   H9B449   H9JMX4   H9B455   A0A194QYV5   Q76IB6   H9JJ72   H9B460   A0A2W1BZD4   H9JVX1   H9B451   A0A385HW64   A0A2W1BPF5   A0A3G1LBE0   H9B448   B5BSX5   E5EVW3   H9JF68   A0A2A4IYY5   A0A2A4K904   H9JJC0   A0A194Q636   A0A3G1LBD4   A0A2W1BV38   H9B454   H9B445   Q2PQU4   A0A2A4JTT3   H9J4G5   H9JL03   H9B447   A0A2H1WST8   H9B457  

PDB

4PC4     E-value=3.90398e-35,     Score=370

KEGG

101737009    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008236   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

Length:

308

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.43993999999999

Exp number, first 60 AAs:

4.41378

Total prob of N-in:

0.18515

outside

1  -  308

 

 

Pi

137.284719

Theta

135.754554

Tajima's D

-0.250685

CLR

301.615809

CSRT

0.302884855757212

Interpretation

Uncertain