SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11938
Pre Gene Modal
BGIBMGA004471
Annotation
30K_protein_20?_partial_[Bombyx_mori]
Full name
Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-6      
Location in the cell
Extracellular   Reliability : 1.453 PlasmaMembrane   Reliability : 1.033
 

Sequence

CDS
ATGTCACTTAATGAAATCAGGAACATTGGTTTAATTACAGCTATGGGGCTCAAAGAATTTGCTGTGATTTTGATGTGTGCACTGGCTGCCAATGCCAACATCATTATCGATGATACTGGTAGTACAGTAGCAGCTACCGTCAGTAGCACCGACTCATCAAGCACTGAAGCAACTGTGAGTGAGAAGATCAACCCATCTTTGGCATCGAGCGACATTGCTAGTACCTCCGCTAAGAACATCGAAGATGAGCTCTACAACGAAGTCGTCTCAAGAGATTTCGACAAGGCGGTATATCGAACCGCGCTATTGTATGGAGCAGGACACGACTCTATTATTTCGAATGTCGTTCACCGGCTCATCAATGACGGCCAGTCCCAAATATTTGATTACGCATACAAACTCACAGCTTCCAGGGGTACATTCATTGTCCGAGCACTTTTCCCTATTGAGATACGAATGCACGAAGACCTGCTGTTCGTTAAAATAATTAGCTATAAGTACGATTTTGCTCTCAAATACAGTCGTGGCGTAGACTTCGCCGGTGATAAAAAAGCCTATGGTGATTCTGACACCAGTACCAGGTTTAAAGTTACGTGGAAGTTTGTTCCTTACTGGATAGGCGATAGAGTATACTTCAAGATTCGTCCAATAGATATTGCGTACTTTTTGAAGCTTGGGAATACGAGAGACAGAGACGGTGACCACGGAGCTTATGGATCTACTAACCACGACACAGACAGGCACTTGTGGTACGTCAAGCCAGTTAGACATAATGGCAAGCTTCTGTTCTATATCATCAACAAGGAGTACGACGAACTCTTGAAGCTCGGAAAATCAAAGGACTGGGATGGTGATCGTGTAGCCTATGGGCACTCGGAAAAGGACTTTAACCCAGACAAATTCGCTTGGTACATTAAATTGATATAA
Protein
MSLNEIRNIGLITAMGLKEFAVILMCALAANANIIIDDTGSTVAATVSSTDSSSTEATVSEKINPSLASSDIASTSAKNIEDELYNEVVSRDFDKAVYRTALLYGAGHDSIISNVVHRLINDGQSQIFDYAYKLTASRGTFIVRALFPIEIRMHEDLLFVKIISYKYDFALKYSRGVDFAGDKKAYGDSDTSTRFKVTWKFVPYWIGDRVYFKIRPIDIAYFLKLGNTRDRDGDHGAYGSTNHDTDRHLWYVKPVRHNGKLLFYIINKEYDELLKLGKSKDWDGDRVAYGHSEKDFNPDKFAWYIKLI

Summary

Miscellaneous
This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.
Similarity
Belongs to the 30 kDa lipoprotein family.
Keywords
Signal   Complete proteome   Lipoprotein   Reference proteome   Secreted   3D-structure  
Feature
chain  Microvitellogenin
EMBL
BABH01022003    BABH01022005    BABH01022007    BABH01043627    BABH01043629    BABH01022006    + More
BABH01022013    BABH01022004    JN977538    AFC87818.1    M28820    J03768    AM293331    CAL25136.1    BABH01022000    X54734    BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021941    JN977524    AFC87804.1    KM926620    AJI02615.1    BABH01021908    BABH01021998    JN977527    AFC87807.1    BABH01021999    JN977544    AFC87824.1    BABH01022014    AY568957    AAS75435.1    X07556    JN977529    AFC87809.1    BABH01021937    JN977519    AFC87799.1    AB553283    BAJ04787.1    BABH01021929    EU024295    ABS71120.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AB553284    BAJ04788.1    AB158646    BAD07027.1    X07553    FJ214661    ACO35751.1    BABH01035696    X54736    X07554    JN977543    AFC87823.1    BABH01021930    BABH01021935    JN977525    AFC87805.1    BABH01021925    JN977523    AFC87803.1    JN977535    AFC87815.1    JN977521    AFC87801.1    JN977522    AFC87802.1    BABH01021931    BABH01021932    BABH01021933    BABH01021934    JN977528    AFC87808.1    FJ214660    ACO35750.1    X07552    X54735    CAA38532.1    JN977534    AFC87814.1    BABH01028980    JN977540    AFC87820.1    KQ460930    KPJ10718.1    AB098260    BAC82630.1    BABH01036437    JN977545    AFC87825.1    KZ149893    PZC78944.1    BABH01040631    JN977536    AFC87816.1    MG799571    AXY55009.1    KZ149940    PZC76929.1    MF497270    AUB45122.1    JN977533    AFC87813.1    AB436163    BAG70410.1    HM012807    ADQ89806.1    BABH01026782    JN977537    AFC87817.1    NWSH01005147    PCG64400.1    NWSH01000017    PCG80765.1    JN977541    AFC87821.1    KQ459582    KPI98870.1    MF497269    AUB45121.1    PZC78918.1    JN977539    AFC87819.1    BABH01028979    JN977530    AFC87810.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    NWSH01000685    PCG74802.1    BABH01021921    BABH01026781    JN977532    AFC87812.1    ODYU01010790    SOQ56108.1    JN977542    AFC87822.1   
Pfam
PF03260   Lipoprotein_11
Interpro
IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       
SUPFAM
SSF50370   SSF50370       
Gene 3D
PDB
4PC4     E-value=3.90398e-35,     Score=370

Ontologies

Topology

Subcellular location
  
Length:
308
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.43993999999999
Exp number, first 60 AAs:
4.41378
Total prob of N-in:
0.18515
outside
1  -  308
 
 

Population Genetic Test Statistics

Pi
137.284719
Theta
135.754554
Tajima's D
-0.250685
CLR
301.615809
CSRT
0.302884855757212
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号