Gene

KWMTBOMO11934  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004464

Annotation

PREDICTED:_hemolymph_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(+):3804707-3806384      View in EpiBrowser

Full name

Low molecular mass 30 kDa lipoprotein 21G1       + More
Microvitellogenin      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Extracellular   Reliability : 1.442

CDS

ATGAAGTTTTTGGTGTTTTTCTCGACCTGCGTGCTGGGGGCCAGCGCCGGTCTTATTGACTTGGACATTAACATTCTATCCGCTCCGACCAGAGCGGAAACGAGGCTCGTCGATGCTATCACCACTGCCGATTACAACACGGCTGTTTCTCTGATTCTGCTGCTCGAGAAACAATCGAGTGGAAGCATCATCGAGGATACCGTCAACAATCTCATCAGAGACGGCAATAGGAATGTTTTAGAGTTCGCCTACAAACTGTGGATCGGGGAGGGTAAGGAAATCGTCAAACACTACTTCCCTGTTCAGTTTAGACAGGTGTTATCCGAGAGCAACGTCAAGATCATCAACAAGAGAGACAATCTTGCCATCAAACTCGGTGCTGCGACAGACTCAGATAACGACAGAATCGCATACGGCGATGCTAACGACAAGAGCAGCGAGAACGTCAGCTGGAAGTTGATTCCTCTCTGGGAGAACAACAGGGTTTACTTCAAGATCTACAGTGTTCGTAGGCACCAATACTTGAAACTAGGAACGGCTACGGATGGTGAAAACGACCATAGCGTTTATGGAGATGATCGCGCTGACACGCACAGACACCAGTGGTACCTGAAGCCCGCTAAGCTCGACAGCCAGGTCCTGTTCTACATCTACAACCGCCAGTACAATCAGGCCTTGAAACTTAGCAGAAGTGTCGACAGCGACGGAGACAGACGCGCGTACTCAAGCTCCAGCAGCGTCGAAGGTCAACCCGAGCTCTTCGGCTGGTCTATCTCTATCGTCAACTAA

Protein

MKFLVFFSTCVLGASAGLIDLDINILSAPTRAETRLVDAITTADYNTAVSLILLLEKQSSGSIIEDTVNNLIRDGNRNVLEFAYKLWIGEGKEIVKHYFPVQFRQVLSESNVKIINKRDNLAIKLGAATDSDNDRIAYGDANDKSSENVSWKLIPLWENNRVYFKIYSVRRHQYLKLGTATDGENDHSVYGDDRADTHRHQWYLKPAKLDSQVLFYIYNRQYNQALKLSRSVDSDGDRRAYSSSSSVEGQPELFGWSISIVN

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Signal   Secreted   3D-structure  

Feature

chain  Low molecular mass 30 kDa lipoprotein 21G1

Uniprot

H9J4M4   Q05432   H9J4M5   Q75RW3   H9J4M8   H9J4M3   + More
H9J4M7   Q00801   H9J4F5   P19616   Q0VJU3   H9B440   A7LIK7   H9B444   P09335   H9J4G3   H9B458   P09338   H9J4F9   A0A0B5Z504   H9J4L6   H9B443   P09334   Q17185   H9J4F6   D4QGB9   C7A8A2   Q6Q0S8   Q00802   C7A8A3   H9B450   E5EVW2   D4QGC0   H9J4L5   P09336   H9B436   H9B437   H9J4G1   H9J4G0   H9J4L7   P09337   H9J4G4   H9J4L1   H9J4G2   H9J4N3   A0A385HW64   H9B454   H9B449   H9JMX4   H9J4N4   H9B447   H9B445   H9B451   H9JJC0   Q2PQU4   H9J4N1   H9JX32   H9B460   H9B455   H9B448   E5EVW3   H9J4G5   H9J4E6   B5BSX5   A0A194Q636   H9JJ72   A0A194QYV5   H9JF68   H9J4N6   H9B459   Q76IB6   A0A3G1LBE0   H9B453   A0A2W1BPF5   H9J4E8   A0A2W1BZD4   H9JL03   A0A2A4IYY5   H9JXA6   A0A2A4JTT3   A0A3G1LBD4   A0A2A4K904   A0A2W1BV38   H9JX33   H9J4E7   H9JVX1   H9J4N5   H9B457   A0A2H1WST8  

Pubmed

19121390    26078299    1343778    1883839    2583514    2454229    + More
25379889    3342240    26126120    2002509    21457781    21514389    22948915    17112968    18840462    26354079    12871935    29175381    28756777   

EMBL

BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    BABH01021998    + More
JN977527    AFC87807.1    AB158646    BAD07027.1    BABH01022000    BABH01021988    BABH01021999    X54734    BABH01021941    JN977524    AFC87804.1    M28820    J03768    AM293331    CAL25136.1    JN977525    AFC87805.1    EU024295    ABS71120.1    JN977529    AFC87809.1    X07553    BABH01021929    JN977543    AFC87823.1    X07556    BABH01021935    KM926620    AJI02615.1    BABH01021930    JN977528    AFC87808.1    X07552    X54735    CAA38532.1    BABH01021937    JN977519    AFC87799.1    AB553283    BAJ04787.1    FJ214660    ACO35750.1    AY568957    AAS75435.1    X54736    FJ214661    ACO35751.1    JN977535    AFC87815.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AB553284    BAJ04788.1    X07554    JN977521    AFC87801.1    JN977522    AFC87802.1    BABH01021931    BABH01021932    BABH01021933    BABH01021934    X07555    BABH01021925    JN977523    AFC87803.1    BABH01021908    BABH01022003    MG799571    AXY55009.1    JN977539    AFC87819.1    JN977534    AFC87814.1    BABH01028980    BABH01022005    BABH01026781    JN977532    AFC87812.1    BABH01028979    JN977530    AFC87810.1    JN977536    AFC87816.1    BABH01036437    JN977541    AFC87821.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01043627    JN977545    AFC87825.1    JN977540    AFC87820.1    JN977533    AFC87813.1    HM012807    ADQ89806.1    BABH01021921    BABH01022007    AB436163    BAG70410.1    KQ459582    KPI98870.1    KQ460930    KPJ10718.1    BABH01026782    JN977537    AFC87817.1    BABH01022014    JN977544    AFC87824.1    AB098260    BAC82630.1    MF497270    AUB45122.1    JN977538    AFC87818.1    KZ149940    PZC76929.1    BABH01022004    KZ149893    PZC78944.1    NWSH01005147    PCG64400.1    BABH01035696    NWSH01000685    PCG74802.1    MF497269    AUB45121.1    NWSH01000017    PCG80765.1    PZC78918.1    BABH01043629    BABH01022006    BABH01040631    BABH01022013    JN977542    AFC87822.1    ODYU01010790    SOQ56108.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220   

PRIDE

H9J4M4    Q05432    H9J4M5    Q75RW3    H9J4M8    H9J4M3    + More
H9J4M7    Q00801    H9J4F5    H9B440    A7LIK7    H9B444    P09335    H9J4G3    H9B458    P09338    H9J4F9    H9J4L6    P09334    Q17185    H9J4F6    D4QGB9    C7A8A2    Q6Q0S8    Q00802    C7A8A3    H9B450    E5EVW2    D4QGC0    H9J4L5    P09336    H9B436    H9B437    H9J4G1    H9J4G0    H9J4L7    P09337    H9J4G4    H9J4L1    H9J4G2    H9J4N3    H9B454    H9B449    H9JMX4    H9J4N4    H9B447    H9B445    H9B451    H9JJC0    Q2PQU4    H9J4N1    H9JX32    H9B460    H9B455    H9B448    E5EVW3    H9J4G5    H9J4E6    B5BSX5    H9JJ72    H9JF68    H9J4N6    H9B459    H9B453    H9J4E8    H9JL03    H9JXA6    H9JX33    H9J4E7    H9J4N5    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4M4   Q05432   H9J4M5   Q75RW3   H9J4M8   H9J4M3   + More
H9J4M7   Q00801   H9J4F5   P19616   Q0VJU3   H9B440   A7LIK7   H9B444   P09335   H9J4G3   H9B458   P09338   H9J4F9   A0A0B5Z504   H9J4L6   H9B443   P09334   Q17185   H9J4F6   D4QGB9   C7A8A2   Q6Q0S8   Q00802   C7A8A3   H9B450   E5EVW2   D4QGC0   H9J4L5   P09336   H9B436   H9B437   H9J4G1   H9J4G0   H9J4L7   P09337   H9J4G4   H9J4L1   H9J4G2   H9J4N3   A0A385HW64   H9B454   H9B449   H9JMX4   H9J4N4   H9B447   H9B445   H9B451   H9JJC0   Q2PQU4   H9J4N1   H9JX32   H9B460   H9B455   H9B448   E5EVW3   H9J4G5   H9J4E6   B5BSX5   A0A194Q636   H9JJ72   A0A194QYV5   H9JF68   H9J4N6   H9B459   Q76IB6   A0A3G1LBE0   H9B453   A0A2W1BPF5   H9J4E8   A0A2W1BZD4   H9JL03   A0A2A4IYY5   H9JXA6   A0A2A4JTT3   A0A3G1LBD4   A0A2A4K904   A0A2W1BV38   H9JX33   H9J4E7   H9JVX1   H9J4N5   H9B457   A0A2H1WST8  

PDB

4PC4     E-value=8.33803e-62,     Score=599

KEGG

100146102    no KO assigned | (RefSeq) Slp, BmSLP; hemolymph protein

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008270   GO:0046872   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 16,         Likelihood:  0.992205

 

 

Length:

262

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.29302

Exp number, first 60 AAs:

1.29298

Total prob of N-in:

0.04584

outside

1  -  262

 

 

Pi

126.233099

Theta

119.859501

Tajima's D

0.215803

CLR

62.311448

CSRT

0.425028748562572

Interpretation

Uncertain