Gene

KWMTBOMO11932  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004463

Annotation

PREDICTED:_hemolymph_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(+):3780127-3781698      View in EpiBrowser

Full name

Microvitellogenin       + More
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Extracellular   Reliability : 1.174

CDS

ATGAAGCTCTTGTTGGTGTTGGCAATCTGTGTGCTGGCAATCCCCAGAAATTCTGGTGCCGTGGGCTTAGTGACTTCGCGTGACAGGTATGTACAAATTATTTACGACGCAGTCAACACTGAGGACTACGCAAAGGCTGTAACTGCAAGCGTGCATCTTAGGAGAGAGACGAGGGGGGATGTCGTCGTGAATGCAGTCACCAGACTCATTGAAGATGGCAAAAGAAATATCTTAGAGTTTGCCTACAAGCTGTGGAAGTTTGATGAGGGCCAACAGGTTGTCAAGGAGCTGTTCCCTGCTCAATTCAAACTGATCTTTTCCGGGAATCTCGTTAAAATCATCACTATTCGTGATGACCTCGCGCTAAAACTCGCTGGTGCTGCCGACGAACTAAACGACAGGGCCGCATACGGTGACGGCAGCGATAAGACAAGCGAGAACATCAGCTGGAAGTTTGTACCTATCTGGGAAGACAATAGGGTTTACTTCAAGATCTTTAACATTCGGCGTCGGCAATACTTGAAGCTAGGGGTGGATGCTGATGGTGAAAACGACCACGCTGTTTTCGGAGATAACTTTGCTGATACCCGCAGACATGAGTGGTACCTGAAGCCAGTCCAGCTTAACGGCAAATTACTGTTCTACATCTATAACCGTCAATACAATCAGGGCTTGAAGCTAAGTAGAACTGCCGACAGTGCAGGAGACCGACGTGCCTACTCGAACGCCGGCGAAGTCGATGGTCAACCAGAGCTTTTCGGCTGGTCCATCGTTTCCTTTTACTAA

Protein

MKLLLVLAICVLAIPRNSGAVGLVTSRDRYVQIIYDAVNTEDYAKAVTASVHLRRETRGDVVVNAVTRLIEDGKRNILEFAYKLWKFDEGQQVVKELFPAQFKLIFSGNLVKIITIRDDLALKLAGAADELNDRAAYGDGSDKTSENISWKFVPIWEDNRVYFKIFNIRRRQYLKLGVDADGENDHAVFGDNFADTRRHEWYLKPVQLNGKLLFYIYNRQYNQGLKLSRTADSAGDRRAYSNAGEVDGQPELFGWSIVSFY

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Signal   Complete proteome   Lipoprotein   Reference proteome   3D-structure   Secreted  

Feature

chain  Microvitellogenin

Uniprot

H9J4M3   H9J4M4   Q05432   H9J4M5   Q75RW3   Q0VJU3   + More
P19616   H9J4M8   Q00801   A0A0B5Z504   H9J4F5   D4QGB9   Q6Q0S8   H9J4F6   C7A8A3   D4QGC0   E5EVW2   Q00802   P09338   H9J4G3   A7LIK7   H9B458   H9J4F9   H9B440   P09336   H9B444   H9B443   P09334   C7A8A2   P09335   Q17185   H9J4M7   H9B436   H9B450   H9B437   H9J4L6   H9J4L5   H9J4G1   H9J4G0   H9J4G4   H9J4L1   H9J4N4   H9J4E6   H9J4N3   H9B447   H9B449   H9JMX4   H9B451   H9B445   H9B454   H9J4N1   H9JX32   A0A385HW64   H9B460   Q2PQU4   H9JJC0   B5BSX5   H9J4N6   H9JF68   H9B455   H9J4L7   A0A2W1BPF5   H9JJ72   P09337   H9B459   A0A194QYV5   A0A2A4IYY5   E5EVW3   A0A3G1LBD4   H9J4G5   H9B448   H9JL03   H9JXA6   A0A2W1BV38   A0A2A4K904   A0A194Q636   A0A2A4JTT3   Q76IB6   A0A2W1BZD4   A0A3G1LBE0   H9B453   H9J4E8   H9JVX1   A0A2H1WST8   H9JX33   H9J4E7   H9J4N5   H9B457  

Pubmed

19121390    26078299    1343778    2583514    2454229    1883839    + More
26126120    21457781    21514389    22948915    3342240    25379889    2002509    17112968    18840462    28756777    26354079    29175381    12871935   

EMBL

BABH01021988    BABH01021994    JN977526    AFC87806.1    D12523    BAA02093.1    + More
BABH01021998    JN977527    AFC87807.1    AB158646    BAD07027.1    AM293331    CAL25136.1    M28820    J03768    BABH01022000    X54734    KM926620    AJI02615.1    BABH01021941    JN977524    AFC87804.1    AB553283    BAJ04787.1    AY568957    AAS75435.1    BABH01021937    JN977519    AFC87799.1    FJ214661    ACO35751.1    AB553284    BAJ04788.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    X54736    X07556    BABH01021929    EU024295    ABS71120.1    JN977543    AFC87823.1    BABH01021935    JN977525    AFC87805.1    X07554    JN977529    AFC87809.1    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    X07553    X54735    CAA38532.1    BABH01021999    JN977521    AFC87801.1    JN977535    AFC87815.1    JN977522    AFC87802.1    BABH01021930    BABH01021931    BABH01021932    BABH01021933    BABH01021934    BABH01021925    JN977523    AFC87803.1    BABH01021908    BABH01022005    BABH01022007    BABH01022003    BABH01026781    JN977532    AFC87812.1    JN977534    AFC87814.1    BABH01028980    JN977536    AFC87816.1    BABH01028979    JN977530    AFC87810.1    JN977539    AFC87819.1    BABH01043627    MG799571    AXY55009.1    JN977545    AFC87825.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01036437    JN977541    AFC87821.1    AB436163    BAG70410.1    BABH01022014    BABH01026782    JN977537    AFC87817.1    JN977540    AFC87820.1    KZ149940    PZC76929.1    X07555    JN977544    AFC87824.1    KQ460930    KPJ10718.1    NWSH01005147    PCG64400.1    HM012807    ADQ89806.1    MF497269    AUB45121.1    BABH01021921    JN977533    AFC87813.1    BABH01035696    KZ149893    PZC78918.1    NWSH01000017    PCG80765.1    KQ459582    KPI98870.1    NWSH01000685    PCG74802.1    AB098260    BAC82630.1    PZC78944.1    MF497270    AUB45122.1    JN977538    AFC87818.1    BABH01022004    BABH01040631    ODYU01010790    SOQ56108.1    BABH01043629    BABH01022006    BABH01022013    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268   

PRIDE

H9J4M3    H9J4M4    Q05432    H9J4M5    Q75RW3    H9J4M8    + More
Q00801    H9J4F5    D4QGB9    Q6Q0S8    H9J4F6    C7A8A3    D4QGC0    E5EVW2    Q00802    P09338    H9J4G3    A7LIK7    H9B458    H9J4F9    H9B440    P09336    H9B444    P09334    C7A8A2    P09335    Q17185    H9J4M7    H9B436    H9B450    H9B437    H9J4L6    H9J4L5    H9J4G1    H9J4G0    H9J4G4    H9J4L1    H9J4N4    H9J4E6    H9J4N3    H9B447    H9B449    H9JMX4    H9B451    H9B445    H9B454    H9J4N1    H9JX32    H9B460    Q2PQU4    H9JJC0    B5BSX5    H9J4N6    H9JF68    H9B455    H9J4L7    H9JJ72    P09337    H9B459    E5EVW3    H9J4G5    H9B448    H9JL03    H9JXA6    H9B453    H9J4E8    H9JX33    H9J4E7    H9J4N5    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4M3   H9J4M4   Q05432   H9J4M5   Q75RW3   Q0VJU3   + More
P19616   H9J4M8   Q00801   A0A0B5Z504   H9J4F5   D4QGB9   Q6Q0S8   H9J4F6   C7A8A3   D4QGC0   E5EVW2   Q00802   P09338   H9J4G3   A7LIK7   H9B458   H9J4F9   H9B440   P09336   H9B444   H9B443   P09334   C7A8A2   P09335   Q17185   H9J4M7   H9B436   H9B450   H9B437   H9J4L6   H9J4L5   H9J4G1   H9J4G0   H9J4G4   H9J4L1   H9J4N4   H9J4E6   H9J4N3   H9B447   H9B449   H9JMX4   H9B451   H9B445   H9B454   H9J4N1   H9JX32   A0A385HW64   H9B460   Q2PQU4   H9JJC0   B5BSX5   H9J4N6   H9JF68   H9B455   H9J4L7   A0A2W1BPF5   H9JJ72   P09337   H9B459   A0A194QYV5   A0A2A4IYY5   E5EVW3   A0A3G1LBD4   H9J4G5   H9B448   H9JL03   H9JXA6   A0A2W1BV38   A0A2A4K904   A0A194Q636   A0A2A4JTT3   Q76IB6   A0A2W1BZD4   A0A3G1LBE0   H9B453   H9J4E8   H9JVX1   A0A2H1WST8   H9JX33   H9J4E7   H9J4N5   H9B457  

PDB

4IY9     E-value=1.56694e-50,     Score=502

KEGG

100146102    no KO assigned | (RefSeq) Slp, BmSLP; hemolymph protein

GO

GO:0005576   GO:0016021   GO:0005615   GO:0008270   GO:0046872   GO:0003676   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 20,         Likelihood:  0.993230

 

 

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.06192

Exp number, first 60 AAs:

2.05857

Total prob of N-in:

0.05238

outside

1  -  261

 

 

Pi

219.026074

Theta

175.552896

Tajima's D

0.912918

CLR

103.782537

CSRT

0.636518174091295

Interpretation

Uncertain