Silkworm Genome Informatics Database

Gene

KWMTBOMO11916

Pre Gene Modal

BGIBMGA004390

Annotation

PREDICTED:_nucleolar_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr20(-):3531004-3535682 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.441

CDS

ATGGCTGCCGCTATGATCAGCGACAGGGGGCTACGGAAGAAGCTAACCCAAGACGCGATCCCGGAGAAGACCCCGCGAAAGCCGTCCAAACGCAAATCGACGGCCGGCGCATCCAAAGCCGACAAGAAAAACGAACAGAACAACAACAAAAGACCTAAAGTGCAAACCGGCGACCCTAAACTCGATTTGTTCACGACGTACCAGCCCTGGGTGATACAAACGTACGGCGACCAGGCAAAAACCAAGACGATTACATTAAAAAAATACGCGCGGATCTTGCGTACGCTACGCGGCGAGGAGTGTAACAGTTCGGACAGCTCCAAGTTTCGTTTCTGGGTCAAAGCGAAGGGTTTTTACGTGGGGAAGCCGCCTGGTTACGACGCGAAGCCGGCGGACAGTATTGTGTGTCGTTATAGTGTCGTGGACGCTGAGGGGTGCACGAGGGGGACCGAGGGGCACGAGGTGTACAGCGGGTCGCAGAACGACCCCCCACTGTACATACCCACGCCGCCTTTGAAGGTAACTTTAAAATGTTAA

Protein

MAAAMISDRGLRKKLTQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTYQPWVIQTYGDQAKTKTITLKKYARILRTLRGEECNSSDSSKFRFWVKAKGFYVGKPPGYDAKPADSIVCRYSVVDAEGCTRGTEGHEVYSGSQNDPPLYIPTPPLKVTLKC

Uniprot

H9J4F1 A0A2H1X2M1 A0A2W1B6E6 A0A2A4JV51 A0A194Q581 A0A0L7L3Y8 + More
A0A212FH43 A0A0N0PEB0 A0A1Y1MSP5 A0A1W4WDA2 A0A139WEC4 A0A139WES5 A0A087ZP53

Pubmed

19121390 28756777 26354079 26227816 22118469 28004739 + More
18362917 19820115

EMBL

BABH01021958 ODYU01012937 SOQ59482.1 KZ150279 PZC71639.1 NWSH01000572 + More
PCG75568.1 KQ459460 KPJ00698.1 JTDY01003079 KOB70188.1 AGBW02008544 OWR53061.1 KQ460009 KPJ18466.1 GEZM01022228 JAV88752.1 KQ971354 KYB26328.1 KYB26327.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000037510 UP000007151 UP000053240 + More
UP000192223 UP000007266 UP000005203

PRIDE

H9J4F1

Pfam

PF00096 zf-C2H2 + More
PF07776 zf-AD

Interpro

IPR039788   NOL4/NOL4L        + More
IPR013087   Znf_C2H2_type
IPR036236   Znf_C2H2_sf
IPR012934   Znf_AD

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9J4F1 A0A2H1X2M1 A0A2W1B6E6 A0A2A4JV51 A0A194Q581 A0A0L7L3Y8 + More
A0A212FH43 A0A0N0PEB0 A0A1Y1MSP5 A0A1W4WDA2 A0A139WEC4 A0A139WES5 A0A087ZP53

KEGG

101736030 no KO assigned | (RefSeq) nucleolar protein 4-like

GO

GO:0005730 GO:0003676 GO:0008270 GO:0005634

PANTHER

PTHR12449

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.15379

outside

1 - 178

Pi

174.021513

Theta

50.014452

Tajima's D

0.057943

CLR

0.432627

CSRT

0.386180690965452

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics