Silkworm Genome Informatics Database

Gene

KWMTBOMO11911

Pre Gene Modal

BGIBMGA004460

Annotation

PREDICTED:_trypsin-1-like_[Bombyx_mori]

Location

Bomo_Chr20(+):3349443-3358430 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.775 Nuclear Reliability : 2.111

CDS

ATGAAACTGTTCATAATATTGTTAATATTGTACGTAAACAATGTACTCGGCGAGAAAACTATATTCGCTAAGAGCTACCCGAAGAAAGTGAAGCCATTTGGGGAGTTGCGAGTCAATTCGGGACACTTCGTGAAGCTACAGAAGAATCTAAACAATGAATACACCGCGTTCCCTGTCGTAGACCCGAAAAGCAAGATGAACGTTCCGCAGAGTCTCTACTTCCCGGCGGATCAGGCCTTGGAACAGAAACCCAGGATCAAGAAATTACTCCCCGAACACAATTGGAAGTCGATGAGATCGAAAAGGTCCGTGAAAGTTGCAAACGAAACTGAAAAAGGTTTGGGAAACAAAAACAGAAGATCGCGTCAACACAGAAAGCCACGGAAAAGTAAGAAGCGACAGCGCAGAGGTGACAGGAAACAGAAGAGAAACCACTCGAAATCCAATAAACGCGAGCATAAGAAACGCCAGAAAGGGCCAAGACACGATCGTGCGAATAAAGTCGAATCAAGAAGGATCATAACGGGAAAGGACGCGCTGATCGAAGACTACCCTTACGTGGTGTCGATACAGAAACAGCGCGAGCACTGGTGCGCCGGCGCTCTGCTCAACCCGAGGCTCGTCATCACGACCGCCAACTGTCTATGGAAAGTTGGATCAAGGTACATTGACCGTGGCGGACAATTGGCCAGGATACAAGAAGTCATGAAACATCCGAATTGGGGTATCAGAAGAGGTCCAGACAATGACGTAGCTTTGATCCTTATGGATACCAAAATTAAATTTTCACATCACGTTCACGCCGTTGATCTTCCAAACGAGGCCACGAAGCCCGCGTTCGACGATGCTTGGGTAGCAAGCTGGGGATCTGACAGGAGGGACGGTGTGTACGATGCAGACAGCCACAGCCTGCAGGTATACCAGGCTCGGCTGTTGGACCCAGCGACGTGCAACAACATTACGCTCAGATTCGGAGTGTTTGTTACCGAGAACTTCATATGTCTGGCTCAGGACGGGAAGCGGGCGCCTTGCACTCGGGACACCGGGGCGCCAGCTGTGAGTGATGGCGTAGTATGGGGCCTTGCGTCGTGGGGCATACGGAAACTATGCGGCACCGAACGTTATCCAGCGATGTTCTCGTATCTAGCGTCCCCGAGCAATTTAGACTTCATCACGAACGCGACGAACTATTTGCTATCCGAAAAGAGGCAATATCCGTTCATCGACAAATTCCCTCGTTCGAATACTATAAAACAGTCCCCGCCGCCATAG

Protein

MKLFIILLILYVNNVLGEKTIFAKSYPKKVKPFGELRVNSGHFVKLQKNLNNEYTAFPVVDPKSKMNVPQSLYFPADQALEQKPRIKKLLPEHNWKSMRSKRSVKVANETEKGLGNKNRRSRQHRKPRKSKKRQRRGDRKQKRNHSKSNKREHKKRQKGPRHDRANKVESRRIITGKDALIEDYPYVVSIQKQREHWCAGALLNPRLVITTANCLWKVGSRYIDRGGQLARIQEVMKHPNWGIRRGPDNDVALILMDTKIKFSHHVHAVDLPNEATKPAFDDAWVASWGSDRRDGVYDADSHSLQVYQARLLDPATCNNITLRFGVFVTENFICLAQDGKRAPCTRDTGAPAVSDGVVWGLASWGIRKLCGTERYPAMFSYLASPSNLDFITNATNYLLSEKRQYPFIDKFPRSNTIKQSPPP

Uniprot

H9J4M0 A0A194Q578

Pubmed

19121390 26354079

EMBL

BABH01021946 KQ459460 KPJ00702.1

Proteomes

UP000005204 UP000053268

PRIDE

H9J4M0

Pfam

PF00089 Trypsin

Interpro

IPR001254 Trypsin_dom + More
IPR009003 Peptidase_S1_PA

SUPFAM

SSF50494 SSF50494

CDD

cd00190 Tryp_SPc

ProteinModelPortal

H9J4M0 A0A194Q578

PDB

1CO7 E-value=1.03066e-17, Score=221

KEGG

101743767 no KO assigned | (RefSeq) trypsin-1-like

GO

GO:0004252 GO:0006508 GO:0016780 GO:0006470 GO:0008138 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

SignalP

Position: 1 - 17, Likelihood: 0.992339

Length:

423

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10019

Exp number, first 60 AAs:

0.07049

Total prob of N-in:

0.00356

outside

1 - 423

Pi

218.301817

Theta

164.225585

Tajima's D

1.140947

CLR

0.366671

CSRT

0.700164991750412

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics