Gene

KWMTBOMO11909  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004394

Annotation

low_molecular_30_kDa_lipoprotein_PBMHP-6_precursor_[Bombyx_mori]

Location

Bomo_Chr20(-):3324848-3326622      View in EpiBrowser

Full name

Low molecular 30 kDa lipoprotein PBMHP-6       + More
Microvitellogenin      
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Extracellular   Reliability : 3.68

CDS

ATGAGACTGACTTTGTTTGCCTTCGTCCTCGCCGTGTGTGCGCTGGCTTCTAACGCCACACTTGCACCAAGAACTGATGACGTACTGGCAGAGCAGCTGTATATGAGTGTCGTCATTGGTGAATACGAGACCGCTATCGCCAAATGCTCTGAATATCTGAAGGAAAAGAAGGGAGAGGTTATCAAGGAAGCCGTGAAGCGTCTGATCGAAAACGGCAAGAGGAACACCATGGACTTCGCCTACCAGTTATGGACAAAGGATGGAAAGGAAATCGTCAAATCTTACTTCCCCATCCAGTTTAGAGTGATCTTCACCGAGCAGACTGTCAAGCTCATAAACAAAAGGGACCATCACGCCCTCAAGTTGATCGACCAACAAAACCACAACAAAATTGCATTCGGTGACTCCAAAGACAAAACCAGCAAGAAAGTCTCCTGGAAGTTTACCCCCGTGTTGGAAAACAACAGAGTATACTTCAAGATCATGTCCACCGAAGACAAACAGTACCTGAAGCTCGATAACACGAAAGGTTCTAGTGATGACCGTATCATCTACGGTGATAGCACCGCTGACACCTTCAAACACCACTGGTACCTTGAGCCCTCCATGTACGAAAGCGACGTCATGTTCTTCGTCTACAACCGAGAGTACAACAGTGTTATGACACTTGATGAAGATATGGCCGCCAACGAAGACCGTGAAGCCTTGGGGCACAGCGGAGAAGTTTCCGGTTATCCCCAACTTTTTGCATGGTACATCGTCCCCTACTAA

Protein

MRLTLFAFVLAVCALASNATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYESDVMFFVYNREYNSVMTLDEDMAANEDREALGHSGEVSGYPQLFAWYIVPY

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Secreted   Signal   3D-structure  

Feature

chain  Low molecular 30 kDa lipoprotein PBMHP-6

Uniprot

H9B443   P09334   C7A8A2   Q17185   P19616   Q0VJU3   + More
Q00801   H9J4M8   H9J4F5   H9B440   D4QGC0   H9J4F9   E5EVW2   H9J4G3   A7LIK7   P09338   H9B458   D4QGB9   H9J4F6   H9B444   H9J4M4   Q6Q0S8   C7A8A3   A0A0B5Z504   P09335   Q00802   H9B437   Q05432   H9B436   H9J4G1   H9B450   P09336   H9J4G0   H9J4L5   H9J4L6   H9J4M3   H9J4M7   H9J4M5   H9J4G4   Q75RW3   A0A194QYV5   H9J4L1   P09337   H9J4L7   A0A194Q636   H9B445   H9B454   H9J4G5   H9B447   H9J4G2   H9B460   H9JJC0   E5EVW3   H9B451   A0A385HW64   H9B449   H9B448   H9JMX4   B5BSX5   Q2PQU4   A0A2A4IYY5   H9JF68   A0A2W1BPF5   H9J4N3   H9J4E6   H9J4N4   H9B455   H9J4N1   H9JJ72   H9JL03   H9JX32   Q76IB6   H9B453   H9J4E8   A0A2H1WST8   A0A3G1LBE0   H9B457   A0A2W1BZD4   H9JXA6   H9J4N6   A0A2A4K904   H9B459   A0A3G1LBD4   A0A2W1BV38   A0A2A4JTT3   H9JX33   H9JVX1   H9J4E7   H9J4N5  

Pubmed

26078299    3342240    2002509    2583514    2454229    1883839    + More
19121390    21457781    21514389    22948915    25379889    26126120    1343778    26354079    18840462    17112968    28756777    12871935    29175381   

EMBL

JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    X54735    + More
CAA38532.1    M28820    J03768    AM293331    CAL25136.1    X54734    BABH01022000    BABH01021941    JN977524    AFC87804.1    JN977525    AFC87805.1    AB553284    BAJ04788.1    BABH01021935    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    BABH01021929    EU024295    ABS71120.1    X07556    JN977543    AFC87823.1    AB553283    BAJ04787.1    BABH01021937    JN977519    AFC87799.1    JN977529    AFC87809.1    BABH01021994    JN977526    AFC87806.1    AY568957    AAS75435.1    FJ214661    ACO35751.1    KM926620    AJI02615.1    X07553    X54736    JN977522    AFC87802.1    D12523    BAA02093.1    JN977521    AFC87801.1    BABH01021930    BABH01021931    BABH01021932    JN977535    AFC87815.1    X07554    BABH01021933    BABH01021934    BABH01021988    BABH01021999    BABH01021998    JN977527    AFC87807.1    BABH01021925    JN977523    AFC87803.1    AB158646    BAD07027.1    KQ460930    KPJ10718.1    BABH01021908    X07555    KQ459582    KPI98870.1    BABH01028979    JN977530    AFC87810.1    JN977539    AFC87819.1    BABH01021921    BABH01026781    JN977532    AFC87812.1    JN977545    AFC87825.1    BABH01036437    JN977541    AFC87821.1    HM012807    ADQ89806.1    JN977536    AFC87816.1    MG799571    AXY55009.1    JN977534    AFC87814.1    JN977533    AFC87813.1    BABH01028980    AB436163    BAG70410.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    NWSH01005147    PCG64400.1    BABH01026782    JN977537    AFC87817.1    KZ149940    PZC76929.1    BABH01022003    BABH01022007    BABH01022005    JN977540    AFC87820.1    BABH01043627    AB098260    BAC82630.1    JN977538    AFC87818.1    BABH01022004    ODYU01010790    SOQ56108.1    MF497270    AUB45122.1    JN977542    AFC87822.1    KZ149893    PZC78944.1    BABH01035696    BABH01022014    NWSH01000017    PCG80765.1    JN977544    AFC87824.1    MF497269    AUB45121.1    PZC78918.1    NWSH01000685    PCG74802.1    BABH01043629    BABH01040631    BABH01022006    BABH01022013   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220   

PRIDE

P09334    C7A8A2    Q17185    Q00801    H9J4M8    H9J4F5    + More
H9B440    D4QGC0    H9J4F9    E5EVW2    H9J4G3    A7LIK7    P09338    H9B458    D4QGB9    H9J4F6    H9B444    H9J4M4    Q6Q0S8    C7A8A3    P09335    Q00802    H9B437    Q05432    H9B436    H9J4G1    H9B450    P09336    H9J4G0    H9J4L5    H9J4L6    H9J4M3    H9J4M7    H9J4M5    H9J4G4    Q75RW3    H9J4L1    P09337    H9J4L7    H9B445    H9B454    H9J4G5    H9B447    H9J4G2    H9B460    H9JJC0    E5EVW3    H9B451    H9B449    H9B448    H9JMX4    B5BSX5    Q2PQU4    H9JF68    H9J4N3    H9J4E6    H9J4N4    H9B455    H9J4N1    H9JJ72    H9JL03    H9JX32    H9B453    H9J4E8    H9B457    H9JXA6    H9J4N6    H9B459    H9JX33    H9J4E7    H9J4N5   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9B443   P09334   C7A8A2   Q17185   P19616   Q0VJU3   + More
Q00801   H9J4M8   H9J4F5   H9B440   D4QGC0   H9J4F9   E5EVW2   H9J4G3   A7LIK7   P09338   H9B458   D4QGB9   H9J4F6   H9B444   H9J4M4   Q6Q0S8   C7A8A3   A0A0B5Z504   P09335   Q00802   H9B437   Q05432   H9B436   H9J4G1   H9B450   P09336   H9J4G0   H9J4L5   H9J4L6   H9J4M3   H9J4M7   H9J4M5   H9J4G4   Q75RW3   A0A194QYV5   H9J4L1   P09337   H9J4L7   A0A194Q636   H9B445   H9B454   H9J4G5   H9B447   H9J4G2   H9B460   H9JJC0   E5EVW3   H9B451   A0A385HW64   H9B449   H9B448   H9JMX4   B5BSX5   Q2PQU4   A0A2A4IYY5   H9JF68   A0A2W1BPF5   H9J4N3   H9J4E6   H9J4N4   H9B455   H9J4N1   H9JJ72   H9JL03   H9JX32   Q76IB6   H9B453   H9J4E8   A0A2H1WST8   A0A3G1LBE0   H9B457   A0A2W1BZD4   H9JXA6   H9J4N6   A0A2A4K904   H9B459   A0A3G1LBD4   A0A2W1BV38   A0A2A4JTT3   H9JX33   H9JVX1   H9J4E7   H9J4N5  

PDB

3PUB     E-value=3.07657e-56,     Score=551

KEGG

693042    no KO assigned | (RefSeq) Lp-c6, 6G1, C-6, Lp; low molecular lipoprotein 30K pBmHPC-6

GO

GO:0005576   GO:0005615   GO:0016021   GO:0003676   GO:0016780   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 19,         Likelihood:  0.997699

 

 

Length:

256

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.24470000000001

Exp number, first 60 AAs:

2.24254

Total prob of N-in:

0.11248

outside

1  -  256

 

 

Pi

249.607224

Theta

181.530392

Tajima's D

1.002067

CLR

1.330465

CSRT

0.655767211639418

Interpretation

Uncertain