Gene

KWMTBOMO11908  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004395

Annotation

PREDICTED:_low_molecular_mass_30_kDa_lipoprotein_21G1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(-):3315875-3317752      View in EpiBrowser

Full name

Low molecular mass 30 kDa lipoprotein 21G1       + More
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Microvitellogenin      
Low molecular 30 kDa lipoprotein PBMHP-6      

Location in the cell

Extracellular   Reliability : 3.333

CDS

ATGAAATTTCTCGTGGTGTTCGCGTCGTGCGTGCTCGCCGTCAGCGCCGGCGTCACTGAAATGTCCGCGGGAAGCATGAGCAGTTCTAACAAAGAACTCGAGGAGAAACTGTACAACAGCATCCTCACCGGTGACTACGACAGCGCTGTCCGTCAGAGCTTGGAATACGAGAACCAAGGCAAGGGCTCCATCATCCAGAATGTAGTTAACAACCTGATCATTGACAAGAGTCGGAACACCATGGAGTACTGCTACAAGCTGTGGGTCGGCAACGGACAGCACATTGTCAGAAAGTACTTCCCCTATAACTTTAGACTCATCATGGCCGGAAACTTCGTTAAGCTCATTTACAGAAACTACAACCTCGCTCTGAAGCTCGGCCCCACTCTTGATCCCGCGAACGAGAGACTTGCATACGGCGATGGTAAGGAAAAGAACAGCGACCTCATCAGTTGGAAGTTCATTACCTTGTGGGAGAACAACAGAGTGTACTTCAAGATCCACAACACTAAGTACAACCAGTACTTGAAACTAAGTTCGACGACTGACTGCAACACTCAAGACCGTGTTATATTCGGCACCAACACCGCCGACACCACCAGGGAGCAGTGGTTCCTCCAGCCCACGAAGTACGAAAACGACGTCCTGTTCTTCATCTACAATCGCGAGTACAACGATGCTTTGAAGCTCGGTAGGATTGTGGACGCTTCGGGAGACCGTATGGCATTTGGACACGATGGTGAAGTAGCTGGTCTCCCTGACATCTTCTCCTGGTTCGTTACACCTTTCTAG

Protein

MKFLVVFASCVLAVSAGVTEMSAGSMSSSNKELEEKLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHIVRKYFPYNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKNSDLISWKFITLWENNRVYFKIHNTKYNQYLKLSSTTDCNTQDRVIFGTNTADTTREQWFLQPTKYENDVLFFIYNREYNDALKLGRIVDASGDRMAFGHDGEVAGLPDIFSWFVTPF

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Signal   Secreted   3D-structure  

Feature

chain  Low molecular mass 30 kDa lipoprotein 21G1

Uniprot

H9J4F5   Q00801   P09338   P09335   A7LIK7   H9B444   + More
H9B440   H9J4G3   H9B458   H9J4F9   H9J4L6   P09337   H9J4L7   H9J4G2   H9J4M8   Q05432   H9J4M4   H9J4M7   H9J4F6   Q6Q0S8   D4QGB9   E5EVW2   Q00802   C7A8A3   D4QGC0   H9B436   H9B437   H9J4G1   A0A0B5Z504   H9J4G0   P09336   H9J4M3   P19616   Q0VJU3   H9B443   P09334   Q17185   C7A8A2   H9B450   H9J4L5   H9J4M5   Q75RW3   H9J4G4   H9J4G5   H9JJC0   H9B454   Q2PQU4   H9B445   H9J4L1   E5EVW3   H9J4E6   H9B448   H9B447   H9J4N3   H9J4N1   H9B449   H9B460   H9JMX4   H9JX32   H9J4N4   B5BSX5   H9B451   H9JF68   A0A2W1BPF5   A0A194QYV5   A0A385HW64   H9B455   A0A194Q636   A0A2A4IYY5   H9JJ72   Q76IB6   H9JL03   A0A3G1LBE0   H9JXA6   A0A2H1WST8   A0A2W1BZD4   H9J4N6   A0A2A4K904   A0A2A4JTT3   H9B453   H9J4E8   A0A2W1BV38   H9B459   H9JX33   H9JVX1   A0A3G1LBD4   H9J4N5   H9J4E7   H9B457  

Pubmed

19121390    26078299    1883839    3342240    25379889    1343778    + More
21457781    21514389    22948915    26126120    2583514    2454229    2002509    17112968    18840462    28756777    26354079    12871935    29175381   

EMBL

BABH01021941    JN977524    AFC87804.1    X54734    X07556    X07553    + More
EU024295    ABS71120.1    JN977529    AFC87809.1    JN977525    AFC87805.1    BABH01021929    JN977543    AFC87823.1    BABH01021935    BABH01021930    X07555    BABH01021932    BABH01021933    BABH01022000    D12523    BAA02093.1    BABH01021994    JN977526    AFC87806.1    BABH01021999    BABH01021937    JN977519    AFC87799.1    AY568957    AAS75435.1    AB553283    BAJ04787.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    X54736    FJ214661    ACO35751.1    AB553284    BAJ04788.1    JN977521    AFC87801.1    JN977522    AFC87802.1    BABH01021931    KM926620    AJI02615.1    BABH01021934    X07554    BABH01021988    M28820    J03768    AM293331    CAL25136.1    JN977528    AFC87808.1    X07552    X54735    CAA38532.1    FJ214660    ACO35750.1    JN977535    AFC87815.1    BABH01021998    JN977527    AFC87807.1    AB158646    BAD07027.1    BABH01021925    JN977523    AFC87803.1    BABH01021921    BABH01036437    JN977541    AFC87821.1    JN977539    AFC87819.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01028979    JN977530    AFC87810.1    BABH01021908    HM012807    ADQ89806.1    BABH01022007    JN977533    AFC87813.1    BABH01026781    JN977532    AFC87812.1    BABH01022003    JN977534    AFC87814.1    JN977545    AFC87825.1    BABH01028980    BABH01043627    BABH01022005    AB436163    BAG70410.1    JN977536    AFC87816.1    BABH01026782    JN977537    AFC87817.1    KZ149940    PZC76929.1    KQ460930    KPJ10718.1    MG799571    AXY55009.1    JN977540    AFC87820.1    KQ459582    KPI98870.1    NWSH01005147    PCG64400.1    AB098260    BAC82630.1    MF497270    AUB45122.1    BABH01035696    ODYU01010790    SOQ56108.1    KZ149893    PZC78944.1    BABH01022014    NWSH01000017    PCG80765.1    NWSH01000685    PCG74802.1    JN977538    AFC87818.1    BABH01022004    PZC78918.1    JN977544    AFC87824.1    BABH01043629    BABH01040631    MF497269    AUB45121.1    BABH01022013    BABH01022006    JN977542    AFC87822.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220   

PRIDE

H9J4F5    Q00801    P09338    P09335    A7LIK7    H9B444    + More
H9B440    H9J4G3    H9B458    H9J4F9    H9J4L6    P09337    H9J4L7    H9J4G2    H9J4M8    Q05432    H9J4M4    H9J4M7    H9J4F6    Q6Q0S8    D4QGB9    E5EVW2    Q00802    C7A8A3    D4QGC0    H9B436    H9B437    H9J4G1    H9J4G0    P09336    H9J4M3    P09334    Q17185    C7A8A2    H9B450    H9J4L5    H9J4M5    Q75RW3    H9J4G4    H9J4G5    H9JJC0    H9B454    Q2PQU4    H9B445    H9J4L1    E5EVW3    H9J4E6    H9B448    H9B447    H9J4N3    H9J4N1    H9B449    H9B460    H9JMX4    H9JX32    H9J4N4    B5BSX5    H9B451    H9JF68    H9B455    H9JJ72    H9JL03    H9JXA6    H9J4N6    H9B453    H9J4E8    H9B459    H9JX33    H9J4N5    H9J4E7    H9B457   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4F5   Q00801   P09338   P09335   A7LIK7   H9B444   + More
H9B440   H9J4G3   H9B458   H9J4F9   H9J4L6   P09337   H9J4L7   H9J4G2   H9J4M8   Q05432   H9J4M4   H9J4M7   H9J4F6   Q6Q0S8   D4QGB9   E5EVW2   Q00802   C7A8A3   D4QGC0   H9B436   H9B437   H9J4G1   A0A0B5Z504   H9J4G0   P09336   H9J4M3   P19616   Q0VJU3   H9B443   P09334   Q17185   C7A8A2   H9B450   H9J4L5   H9J4M5   Q75RW3   H9J4G4   H9J4G5   H9JJC0   H9B454   Q2PQU4   H9B445   H9J4L1   E5EVW3   H9J4E6   H9B448   H9B447   H9J4N3   H9J4N1   H9B449   H9B460   H9JMX4   H9JX32   H9J4N4   B5BSX5   H9B451   H9JF68   A0A2W1BPF5   A0A194QYV5   A0A385HW64   H9B455   A0A194Q636   A0A2A4IYY5   H9JJ72   Q76IB6   H9JL03   A0A3G1LBE0   H9JXA6   A0A2H1WST8   A0A2W1BZD4   H9J4N6   A0A2A4K904   A0A2A4JTT3   H9B453   H9J4E8   A0A2W1BV38   H9B459   H9JX33   H9JVX1   A0A3G1LBD4   H9J4N5   H9J4E7   H9B457  

PDB

4PC4     E-value=2.08576e-115,     Score=1061

KEGG

778471    no KO assigned | (RefSeq) Lp-c21, 21G1, C-21, Lp; low molecular lipoprotein 30K pBmHPC-21

GO

GO:0005576   GO:0005615   GO:0016021   GO:0003676   GO:0016780   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 16,         Likelihood:  0.994523

 

 

Length:

263

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.85044

Exp number, first 60 AAs:

2.77985

Total prob of N-in:

0.13617

outside

1  -  263

 

 

Pi

169.226542

Theta

154.243635

Tajima's D

0.325718

CLR

0

CSRT

0.474626268686566

Interpretation

Uncertain