Gene

KWMTBOMO11902  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004399

Annotation

PREDICTED:_low_molecular_30_kDa_lipoprotein_PBMHP-12_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(-):3269446-3271192      View in EpiBrowser

Full name

Low molecular 30 kDa lipoprotein PBMHP-12       + More
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Microvitellogenin      

Location in the cell

Extracellular   Reliability : 3.867

CDS

ATGAAACTTCTCGTTGTGTTCGCAATGTGCGTGCTCGCTGCCAGCGCCGGCGTCGTGGAACTATCCGCGGACAGCATGAGCCCTTCTAACCAAGACCTCGAGGACAAACTGTACAACAGCATCCTCACCGGTGACTACGACAGTGCTGTACGTAAGAGCTTGGAATACGAGAGCCAAGGCCAGGGCAGCATCGTTCAAAATGTAGTTAACAATCTGATCATTGACAAGAGACGGAACACCATGGAGTACTGCTACAAGCTGTGGGTCGGCAACGGACAGGATATTGTCAAAAAGTACTTCCCATTAAGCTTTAGACTCATCATGGCCGGAAACTACGTCAAGCTCATTTACAGAAACTACAACCTCGCTCTGAAGCTCGGTTCCACAACCAATCCCTCGAATGAGAGAATTGCCTACGGCGATGGTGTTGACAAGCACACTGAACTCGTCAGTTGGAAGTTCATTACCTTGTGGGAGAACAACAGAGTGTACTTCAAGGCCCACAACACTAAGTACAACCAGTACTTGAAGATGAGTACGTCGACTTGCAACTGCAACGCTCGGGACCGTGTTGTATACGGCGGCAACAGCGCTGACAGCACCAGGGAGCAATGGTTCTTCCAGCCCGCCAAGTACGAAAACGACGTCCTGTTCTTCATCTACAACCGCGAATTCAACGATGCCTTGGAGCTCGATACGATCGTGAACGCCTCGGGAGACCGCAAGGCCGTTGGACACGACGGTGAAGTCTCCGGTCTTCCTGAAATCTACTCGTGGTTCATTACACCTTTCTAA

Protein

MKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLKMSTSTCNCNARDRVVYGGNSADSTREQWFFQPAKYENDVLFFIYNREFNDALELDTIVNASGDRKAVGHDGEVSGLPEIYSWFITPF

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Secreted   Signal   3D-structure  

Feature

chain  Low molecular 30 kDa lipoprotein PBMHP-12

Uniprot

H9B440   P09335   H9J4F9   A7LIK7   H9B444   P09338   + More
H9J4G3   H9B458   H9J4F5   Q00801   H9J4L6   H9J4L7   P09337   H9J4G2   H9J4M8   Q05432   H9J4M4   H9J4M7   H9J4F6   E5EVW2   Q6Q0S8   Q00802   C7A8A3   H9B437   H9B436   H9J4G1   D4QGB9   H9B443   P09334   Q17185   H9J4G0   C7A8A2   D4QGC0   A0A0B5Z504   P09336   H9B450   H9J4L5   P19616   Q0VJU3   H9J4M3   H9J4M5   Q75RW3   H9J4G4   H9J4G5   H9B454   H9B448   H9J4L1   H9B447   Q2PQU4   A0A194QYV5   H9JJC0   H9B445   E5EVW3   A0A194Q636   H9B460   H9B449   H9JMX4   B5BSX5   H9JF68   H9B451   A0A2W1BPF5   H9J4N1   A0A2A4IYY5   H9J4N4   A0A385HW64   H9B455   H9J4E6   H9J4N3   H9JX32   H9JJ72   Q76IB6   A0A3G1LBE0   H9JL03   A0A2H1WST8   H9JXA6   A0A2W1BZD4   A0A2A4JTT3   H9J4N6   H9B459   A0A2A4K904   A0A3G1LBD4   A0A2W1BV38   H9B457   H9JVX1   H9B453   H9J4E8   H9J4N5   H9JX33   H9J4E7  

Pubmed

26078299    3342240    19121390    25379889    1883839    1343778    + More
21457781    21514389    22948915    2002509    26126120    2583514    2454229    17112968    26354079    18840462    28756777    12871935    29175381   

EMBL

JN977525    AFC87805.1    X07553    BABH01021935    EU024295    ABS71120.1    + More
JN977529    AFC87809.1    X07556    BABH01021929    JN977543    AFC87823.1    BABH01021941    JN977524    AFC87804.1    X54734    BABH01021930    BABH01021932    BABH01021933    X07555    BABH01022000    D12523    BAA02093.1    BABH01021994    JN977526    AFC87806.1    BABH01021999    BABH01021937    JN977519    AFC87799.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AY568957    AAS75435.1    X54736    FJ214661    ACO35751.1    JN977522    AFC87802.1    JN977521    AFC87801.1    BABH01021931    AB553283    BAJ04787.1    JN977528    AFC87808.1    X07552    X54735    CAA38532.1    BABH01021934    FJ214660    ACO35750.1    AB553284    BAJ04788.1    KM926620    AJI02615.1    X07554    JN977535    AFC87815.1    M28820    J03768    AM293331    CAL25136.1    BABH01021988    BABH01021998    JN977527    AFC87807.1    AB158646    BAD07027.1    BABH01021925    JN977523    AFC87803.1    BABH01021921    JN977539    AFC87819.1    JN977533    AFC87813.1    BABH01021908    BABH01026781    JN977532    AFC87812.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    KQ460930    KPJ10718.1    BABH01036437    JN977541    AFC87821.1    BABH01028979    JN977530    AFC87810.1    HM012807    ADQ89806.1    KQ459582    KPI98870.1    JN977545    AFC87825.1    JN977534    AFC87814.1    BABH01028980    AB436163    BAG70410.1    BABH01026782    JN977537    AFC87817.1    JN977536    AFC87816.1    KZ149940    PZC76929.1    BABH01022003    NWSH01005147    PCG64400.1    BABH01022005    MG799571    AXY55009.1    JN977540    AFC87820.1    BABH01022007    BABH01043627    AB098260    BAC82630.1    MF497270    AUB45122.1    ODYU01010790    SOQ56108.1    BABH01035696    KZ149893    PZC78944.1    NWSH01000685    PCG74802.1    BABH01022014    JN977544    AFC87824.1    NWSH01000017    PCG80765.1    MF497269    AUB45121.1    PZC78918.1    JN977542    AFC87822.1    BABH01040631    JN977538    AFC87818.1    BABH01022004    BABH01022013    BABH01043629    BABH01022006   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220   

PRIDE

H9B440    P09335    H9J4F9    A7LIK7    H9B444    P09338    + More
H9J4G3    H9B458    H9J4F5    Q00801    H9J4L6    H9J4L7    P09337    H9J4G2    H9J4M8    Q05432    H9J4M4    H9J4M7    H9J4F6    E5EVW2    Q6Q0S8    Q00802    C7A8A3    H9B437    H9B436    H9J4G1    D4QGB9    P09334    Q17185    H9J4G0    C7A8A2    D4QGC0    P09336    H9B450    H9J4L5    H9J4M3    H9J4M5    Q75RW3    H9J4G4    H9J4G5    H9B454    H9B448    H9J4L1    H9B447    Q2PQU4    H9JJC0    H9B445    E5EVW3    H9B460    H9B449    H9JMX4    B5BSX5    H9JF68    H9B451    H9J4N1    H9J4N4    H9B455    H9J4E6    H9J4N3    H9JX32    H9JJ72    H9JL03    H9JXA6    H9J4N6    H9B459    H9B457    H9B453    H9J4E8    H9J4N5    H9JX33    H9J4E7   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9B440   P09335   H9J4F9   A7LIK7   H9B444   P09338   + More
H9J4G3   H9B458   H9J4F5   Q00801   H9J4L6   H9J4L7   P09337   H9J4G2   H9J4M8   Q05432   H9J4M4   H9J4M7   H9J4F6   E5EVW2   Q6Q0S8   Q00802   C7A8A3   H9B437   H9B436   H9J4G1   D4QGB9   H9B443   P09334   Q17185   H9J4G0   C7A8A2   D4QGC0   A0A0B5Z504   P09336   H9B450   H9J4L5   P19616   Q0VJU3   H9J4M3   H9J4M5   Q75RW3   H9J4G4   H9J4G5   H9B454   H9B448   H9J4L1   H9B447   Q2PQU4   A0A194QYV5   H9JJC0   H9B445   E5EVW3   A0A194Q636   H9B460   H9B449   H9JMX4   B5BSX5   H9JF68   H9B451   A0A2W1BPF5   H9J4N1   A0A2A4IYY5   H9J4N4   A0A385HW64   H9B455   H9J4E6   H9J4N3   H9JX32   H9JJ72   Q76IB6   A0A3G1LBE0   H9JL03   A0A2H1WST8   H9JXA6   A0A2W1BZD4   A0A2A4JTT3   H9J4N6   H9B459   A0A2A4K904   A0A3G1LBD4   A0A2W1BV38   H9B457   H9JVX1   H9B453   H9J4E8   H9J4N5   H9JX33   H9J4E7  

PDB

4PC4     E-value=2.03768e-131,     Score=1199

KEGG

693043    no KO assigned | (RefSeq) Lp-c12, C-12, Lp; low molecular lipoprotein 30K pBmHPC-12

GO

GO:0005576   GO:0005615   GO:0016021   GO:0016020   GO:0016780   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 16,         Likelihood:  0.998246

 

 

Length:

264

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.63199

Exp number, first 60 AAs:

1.574

Total prob of N-in:

0.07928

outside

1  -  264

 

 

Pi

221.678215

Theta

192.614137

Tajima's D

0.47292

CLR

0

CSRT

0.511174441277936

Interpretation

Uncertain