Gene

KWMTBOMO11900  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004399

Annotation

low_molecular_30_kDa_lipoprotein_PBMHPC-23_precursor_[Bombyx_mori]

Location

Bomo_Chr20(+):3253543-3255903      View in EpiBrowser

Full name

Low molecular 30 kDa lipoprotein PBMHP-12       + More
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Microvitellogenin      

Location in the cell

Extracellular   Reliability : 3.851

CDS

ATGAAACTTCTCGTTGTATTTGCGATGTGCATGCTCGCCGCCAGCGCGGGCGTCGTTGAACTATCCGCGGACACTTCTAACCAAGACCTCGAGGAGAAACTGTACAACAGCATCCTCACCGGCGACTACGACAGTGCTGTCCGTCAGAGCTTGGAATATGAGAGCCAAGGCAAGGGCTCCATCATCCAGAATGTAGTTAACAACCTGATCATTGACAAGAGACGGAACACCATGGAGTACTGCTACAAGCTGTGGGTCGGCAACGGACAGGAAATTGTTAGAAAGTACTTCCCATTAAACTTTAGACTCATCATGGCCGGAAACTATGTCAAGATCATTTACAGAAACTACAACCTCGCTCTGAAGCTCGGTTCCACAACCAATCCCTCGAATGAGAGAATTGCCTACGGCGATGGTGTAGACAAGCATACTGAACTCGTCAGTTGGAAGTTCATTACCTTGTGGGAGAACAACAGAGTGTACTTCAAGATCCACAACACTAAGTACAACCAGTACTTGAAGATGAGTACGACGACTTGCAACTGCAACAGTCGTGACCGTGTTGTATACGGCGGCAACAGCGCTGACAGCACCAGGGAGCAATGGTTCTTCCAGCCCGCCAAGTACGAAAACGACGTCCTGTTCTTCATCTACAATCGCCAATTCAACGATGCCTTGGAGCTCGGTACGATCGTGAACGCCTCGGGAGACCGCAAGGCCGTTGGACACGATGGTGAAGTCGCCGGTCTTCCTGACATCTACTCGTGGTTCATTACACCTTTCTAA

Protein

MKLLVVFAMCMLAASAGVVELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDRVVYGGNSADSTREQWFFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Secreted   Signal   3D-structure  

Feature

chain  Low molecular 30 kDa lipoprotein PBMHP-12

Uniprot

A7LIK7   H9B444   P09335   H9B440   P09338   H9J4F9   + More
H9J4G3   H9B458   H9J4F5   Q00801   H9J4L6   H9J4L7   P09337   H9J4G2   Q05432   H9J4M8   H9J4M4   H9J4F6   H9J4M7   E5EVW2   Q00802   Q6Q0S8   C7A8A3   D4QGB9   D4QGC0   H9B443   P09334   H9B436   Q17185   P09336   C7A8A2   H9B437   A0A0B5Z504   H9J4G1   H9J4G0   H9J4M3   H9B450   P19616   Q0VJU3   H9J4L5   H9J4M5   Q75RW3   H9J4G4   H9J4G5   H9B448   E5EVW3   H9J4L1   H9B454   A0A194QYV5   H9B447   H9JJC0   H9B445   Q2PQU4   H9J4N3   A0A194Q636   H9J4E6   H9J4N4   H9B460   H9J4N1   H9B449   H9JMX4   B5BSX5   H9JF68   H9JX32   H9B451   A0A2W1BPF5   A0A2A4IYY5   A0A385HW64   Q76IB6   H9B455   H9JJ72   A0A3G1LBE0   H9JXA6   A0A2H1WST8   A0A2W1BZD4   H9JL03   A0A2A4JTT3   H9J4N6   H9JVX1   A0A2A4K904   H9B459   H9B457   A0A3G1LBD4   A0A2W1BV38   H9B453   H9J4E8   H9JX33   H9J4N5   H9J4E7  

Pubmed

25379889    26078299    3342240    19121390    1883839    1343778    + More
21457781    21514389    22948915    2002509    26126120    2583514    2454229    26354079    17112968    18840462    28756777    12871935    29175381   

EMBL

EU024295    ABS71120.1    JN977529    AFC87809.1    X07553    JN977525    + More
AFC87805.1    X07556    BABH01021935    BABH01021929    JN977543    AFC87823.1    BABH01021941    JN977524    AFC87804.1    X54734    BABH01021930    BABH01021932    BABH01021933    X07555    D12523    BAA02093.1    BABH01022000    BABH01021994    JN977526    AFC87806.1    BABH01021937    JN977519    AFC87799.1    BABH01021999    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    X54736    AY568957    AAS75435.1    FJ214661    ACO35751.1    AB553283    BAJ04787.1    AB553284    BAJ04788.1    JN977528    AFC87808.1    X07552    JN977521    AFC87801.1    X54735    CAA38532.1    X07554    FJ214660    ACO35750.1    JN977522    AFC87802.1    KM926620    AJI02615.1    BABH01021931    BABH01021934    BABH01021988    JN977535    AFC87815.1    M28820    J03768    AM293331    CAL25136.1    BABH01021998    JN977527    AFC87807.1    AB158646    BAD07027.1    BABH01021925    JN977523    AFC87803.1    BABH01021921    JN977533    AFC87813.1    HM012807    ADQ89806.1    BABH01021908    JN977539    AFC87819.1    KQ460930    KPJ10718.1    BABH01026781    JN977532    AFC87812.1    BABH01036437    JN977541    AFC87821.1    BABH01028979    JN977530    AFC87810.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01022003    KQ459582    KPI98870.1    BABH01022007    BABH01022005    JN977545    AFC87825.1    JN977534    AFC87814.1    BABH01028980    AB436163    BAG70410.1    BABH01026782    JN977537    AFC87817.1    BABH01043627    JN977536    AFC87816.1    KZ149940    PZC76929.1    NWSH01005147    PCG64400.1    MG799571    AXY55009.1    AB098260    BAC82630.1    JN977540    AFC87820.1    MF497270    AUB45122.1    BABH01035696    ODYU01010790    SOQ56108.1    KZ149893    PZC78944.1    NWSH01000685    PCG74802.1    BABH01022014    BABH01040631    NWSH01000017    PCG80765.1    JN977544    AFC87824.1    JN977542    AFC87822.1    MF497269    AUB45121.1    PZC78918.1    JN977538    AFC87818.1    BABH01022004    BABH01043629    BABH01022013    BABH01022006   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220   

PRIDE

A7LIK7    H9B444    P09335    H9B440    P09338    H9J4F9    + More
H9J4G3    H9B458    H9J4F5    Q00801    H9J4L6    H9J4L7    P09337    H9J4G2    Q05432    H9J4M8    H9J4M4    H9J4F6    H9J4M7    E5EVW2    Q00802    Q6Q0S8    C7A8A3    D4QGB9    D4QGC0    P09334    H9B436    Q17185    P09336    C7A8A2    H9B437    H9J4G1    H9J4G0    H9J4M3    H9B450    H9J4L5    H9J4M5    Q75RW3    H9J4G4    H9J4G5    H9B448    E5EVW3    H9J4L1    H9B454    H9B447    H9JJC0    H9B445    Q2PQU4    H9J4N3    H9J4E6    H9J4N4    H9B460    H9J4N1    H9B449    H9JMX4    B5BSX5    H9JF68    H9JX32    H9B451    H9B455    H9JJ72    H9JXA6    H9JL03    H9J4N6    H9B459    H9B457    H9B453    H9J4E8    H9JX33    H9J4N5    H9J4E7   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

A7LIK7   H9B444   P09335   H9B440   P09338   H9J4F9   + More
H9J4G3   H9B458   H9J4F5   Q00801   H9J4L6   H9J4L7   P09337   H9J4G2   Q05432   H9J4M8   H9J4M4   H9J4F6   H9J4M7   E5EVW2   Q00802   Q6Q0S8   C7A8A3   D4QGB9   D4QGC0   H9B443   P09334   H9B436   Q17185   P09336   C7A8A2   H9B437   A0A0B5Z504   H9J4G1   H9J4G0   H9J4M3   H9B450   P19616   Q0VJU3   H9J4L5   H9J4M5   Q75RW3   H9J4G4   H9J4G5   H9B448   E5EVW3   H9J4L1   H9B454   A0A194QYV5   H9B447   H9JJC0   H9B445   Q2PQU4   H9J4N3   A0A194Q636   H9J4E6   H9J4N4   H9B460   H9J4N1   H9B449   H9JMX4   B5BSX5   H9JF68   H9JX32   H9B451   A0A2W1BPF5   A0A2A4IYY5   A0A385HW64   Q76IB6   H9B455   H9JJ72   A0A3G1LBE0   H9JXA6   A0A2H1WST8   A0A2W1BZD4   H9JL03   A0A2A4JTT3   H9J4N6   H9JVX1   A0A2A4K904   H9B459   H9B457   A0A3G1LBD4   A0A2W1BV38   H9B453   H9J4E8   H9JX33   H9J4N5   H9J4E7  

PDB

4PC4     E-value=2.60471e-139,     Score=1267

KEGG

693045    no KO assigned | (RefSeq) Lp-c23, C-23, Lp; low molecular lipoprotein 30K pBmHPC-23

GO

GO:0005576   GO:0005615   GO:0016021   GO:0016020   GO:0016780   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 16,         Likelihood:  0.998110

 

 

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.718969999999999

Exp number, first 60 AAs:

0.69332

Total prob of N-in:

0.03995

outside

1  -  261

 

 

Pi

77.828762

Theta

120.689255

Tajima's D

-0.434351

CLR

0.007881

CSRT

0.257237138143093

Interpretation

Uncertain