SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11898  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004401
Annotation
low_molecular_mass_30_kDa_lipoprotein_19G1-like_precursor_[Bombyx_mori]
Full name
Low molecular mass 30 kDa lipoprotein 19G1       + More
Low molecular 30 kDa lipoprotein PBMHPC-19      
Microvitellogenin      
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Location in the cell
Extracellular   Reliability : 3.228
 

Sequence

CDS
ATGAAAACCGTTCAAGTTATTCTGTGTCTTTTCGTGGCGTCTTTATATGCCAACGGAACCTCAGTCTCCGACTCCAAACTCGAAGACGATCTTTACAACAGCATCCTCGTTGCCGATTACGACAATGCCGTTGAAAAAAGCAAACAGATCTACGAGGACAAGAAGAGCGAAGTCATCACAAATGTCGTAAACAAACTCATACGAAACAACAAGATGAACTGCATGGAGTACGCCTACCAGCTCTGGATGCAAGGCTCCAAGGATATCGTCCGGGAGTGCTTCCCTGTTGAGTTCACACTTATTTTCGCCGAAAACAACATTAAGCTGATGTACAAGCGCGACGGTCTTGCTTTGACGTTGCGCGATGACAGCAACAACGATGGCAGACTTGCCTACGGCGATGGCAAGGACAAGACGAGTCCAAAAGTCAGCTGGAAGTTCGTTCCTCTGTGGGAGAACAACAAGGTCTACTTCAAGATTGTGAACACTCAGCGTAATCAGTATTTGACGTTGTCAGTTAAAACAACCCCGACCCAAAACCACATGGCCTACGGGGTCAACAGCGTCGAAGGTTTTAAGGCCCAATGGACCTTGCAGCCCGCTAAGTACGACAACGACGTTTTGTTCTTCATGTACAACCGCGAATACAACGAGGCGTTGGTGCTCTCTAAGCCAACCGACACCTGGGGTAACCGCATGGCGTTCGGATACAGTGGCCGCGTGGTCGGAAGTCCCGAGCAGTACGCTTGGGGTATAAAGGCTTTCTAA
Protein
MKTVQVILCLFVASLYANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCMEYAYQLWMQGSKDIVRECFPVEFTLIFAENNIKLMYKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSWKFVPLWENNKVYFKIVNTQRNQYLTLSVKTTPTQNHMAYGVNSVEGFKAQWTLQPAKYDNDVLFFMYNREYNEALVLSKPTDTWGNRMAFGYSGRVVGSPEQYAWGIKAF

Summary

Miscellaneous
This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.
Similarity
Belongs to the 30 kDa lipoprotein family.
Keywords
3D-structure   Complete proteome   Lipoprotein   Reference proteome   Signal   Secreted  
Feature
chain  Low molecular mass 30 kDa lipoprotein 19G1
EMBL
BABH01021930    BABH01021931    BABH01021932    JN977522    AFC87802.1    JN977521    + More
AFC87801.1    BABH01021933    BABH01021934    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    BABH01021937    JN977519    AFC87799.1    X54736    FJ214661    ACO35751.1    X07554    JN977535    AFC87815.1    AB553284    BAJ04788.1    BABH01021929    AB553283    BAJ04787.1    AY568957    AAS75435.1    BABH01021925    JN977523    AFC87803.1    M28820    J03768    AM293331    CAL25136.1    X54734    BABH01021941    JN977524    AFC87804.1    JN977525    AFC87805.1    BABH01021935    X07553    X07556    EU024295    ABS71120.1    JN977529    AFC87809.1    JN977528    AFC87808.1    X07552    KM926620    AJI02615.1    X54735    CAA38532.1    BABH01022000    FJ214660    ACO35750.1    JN977543    AFC87823.1    D12523    BAA02093.1    BABH01021994    JN977526    AFC87806.1    BABH01021998    JN977527    AFC87807.1    AB158646    BAD07027.1    BABH01021988    BABH01021999    JN977539    AFC87819.1    BABH01028979    JN977530    AFC87810.1    BABH01021908    BABH01026781    JN977532    AFC87812.1    X07555    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01021921    BABH01036437    JN977541    AFC87821.1    JN977534    AFC87814.1    KQ460930    KPJ10718.1    BABH01028980    KQ459582    KPI98870.1    JN977545    AFC87825.1    AB436163    BAG70410.1    JN977533    AFC87813.1    JN977536    AFC87816.1    BABH01026782    JN977537    AFC87817.1    HM012807    ADQ89806.1    KZ149940    PZC76929.1    BABH01022005    BABH01022003    NWSH01005147    PCG64400.1    JN977540    AFC87820.1    JN977538    AFC87818.1    BABH01022004    BABH01043627    AB098260    BAC82630.1    BABH01022007    MG799571    AXY55009.1    BABH01043629    BABH01022006    BABH01022013    ODYU01010790    SOQ56108.1    MF497270    AUB45122.1    BABH01035696    MF497269    AUB45121.1    KZ149893    PZC78918.1    JN977542    AFC87822.1    PZC78944.1    NWSH01000017    PCG80765.1    BABH01022014    JN977544    AFC87824.1    NWSH01000685    PCG74802.1    BABH01040631   
Pfam
PF03260   Lipoprotein_11
Interpro
IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       
SUPFAM
SSF50370   SSF50370       
Gene 3D
PDB
3PUB     E-value=6.44163e-103,     Score=953

Ontologies

Topology

Subcellular location
  
SignalP
Position:   1 - 19,         Likelihood:  0.994956
 
 
Length:
255
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.33243
Exp number, first 60 AAs:
0.33116
Total prob of N-in:
0.06019
outside
1  -  255
 
 

Population Genetic Test Statistics

Pi
141.41287
Theta
129.921049
Tajima's D
0.345404
CLR
0
CSRT
0.464526773661317
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26280517 NNKEADYTAPIYTPQNR 100.00 2e-07
28467696 TTPSYVAFTDTER 100.00 2e-07
29197581 IEDDIYNSIIVADYDNAVEK 100.00 2e-07
26280517 VTIIEIPNRTEVR 100.00 5e-05
26280517 QIIEGGMCDVAIAVGFEK 100.00 2e-04
24402669 QIYDSVISGDYDHAASIAKR 100.00 2e-04
28467696 QIYDSVISGDYDHAASIAK 100.00 2e-04
29197581 PTDTWGNR 100.00 2e-04
26822097 EYNEAIVISRPTDTWGNR 100.00 0.002
25860555 STSDIPIIAIDSFR 100.00 0.002
26280517 VVASAHDAYEIR 100.00 0.002
25044914 VVGSEIIQK 100.00 0.002
24093152 VVGNNCVIYVR 100.00 0.002
24402669 VVGIGGAFVIR 100.00 0.002
28467696 VVGSEIIQK 100.00 0.002
29197581 QIYEDKKSEVITNVVNK 100.00 0.002
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