Silkworm Genome Informatics Database

Gene

KWMTBOMO11897 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004456

Annotation

30K_protein_11_[Bombyx_mori]

Location

Bomo_Chr20(+):3231133-3237693 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.478

CDS

ATGACAGGTCAAGAAGTGGTCGCTCTCGGTCTGTTAGCAGTGATAAAAGCTGTGAAGGTGCGAATTCAAAGAAATCCCAAACGTAAGCAGAAACTGTTGGCCCTTCAGATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGCTACGGGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTGTCTAATGGACCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGTATTCCAACAAGATACGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGTTTTTTGGAAGCAAATAATTTAAGATCATCCATGAACAAGAGATGTGATATAGCCTCAGCTCCTCTGCAAAGTCGAGTTCTTGGCCTCATCATATACAAGGTCAATAGACGCTACGCGTCATCTACGGTCTCCGTTACACCCGTCGGCTCCGCGGCGCCCGGGGCCTCCATGGCACCCGACGCGCTCGTGGTGTACGCCACCCCTGCAACACCTGTACCCTTTGGCAGAATGTGGCCCCGTAGGTGTACCACCACCCCGCCTATTTCTGCCATTAAGCTCGGTAGGATTGTGGACGCTTCAGGAGACCGTATAGCAGCTCCTAACAAAATGAAACTTCTCGTTGTATTTGCGATGTGCGTGCTCGCCGCCAGCGCGGGCGTCGTTAAACTATCCGCGGACAGTTCTAACCAAGACCTCGAGGAGAAACTGTACAACAGTATCCTCACCGGTGACTACGACAGTGCTGTCCGTCAGAGCTTAGAATACGAGAGCCAAGGCAAGGGCTCCATCGTTGGGAATGTAACTTACAACCTGATCGTTGACAGGAGACAGAACACCATGGAGTACTGCTACAAGCTGTGGGTCGGCAACGGAGAGCACATTGTCAGAAAGTACTTCCCCTTTAACTTTAGGCTCATCATGGCCGGAAACTACGTCAACCTCATTTACAGAAACTACAAGCTTGCTCTGAAGCTCGGTTCCACAACCAATCCCTCGAATGAGAGAATTGCATACGGCGATGGTATAGACAAGCATACTGAACTCGTCAGTTGGAAGTTCATTACCTTGTGGGAGGACAACAGAGTGTACTTTAAGATCCACAACACTAAGTACAACCAGTACTTGAAACTGAGCTCGAAGACTGACAGCAATACTGGCGACCGTCTTGTATACGGCGTCAGCACCGCTGACACCACCAGCGAGCAGTGGTTCCTCCAGCCCGCGAAGTACGAAAACGATCTCCTGTTCTTCATCTACAATCGCGAGTACAACGATGCTTTGAAGCTTGGTGGGATTGTGGATGGCTCACGAGACCGCATGGCATTTGGACACGACGGTGAAGTGGCTGGTCTTCCTGCCCTCTATAGTTGGATGGTTCCACGTTTCTGGACTGCCGCATAA

Protein

MTGQEVVALGLLAVIKAVKVRIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLSNGPETEEMPRFVEAVFQQDTAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRSFLEANNLRSSMNKRCDIASAPLQSRVLGLIIYKVNRRYASSTVSVTPVGSAAPGASMAPDALVVYATPATPVPFGRMWPRRCTTTPPISAIKLGRIVDASGDRIAAPNKMKLLVVFAMCVLAASAGVVKLSADSSNQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIVGNVTYNLIVDRRQNTMEYCYKLWVGNGEHIVRKYFPFNFRLIMAGNYVNLIYRNYKLALKLGSTTNPSNERIAYGDGIDKHTELVSWKFITLWEDNRVYFKIHNTKYNQYLKLSSKTDSNTGDRLVYGVSTADTTSEQWFLQPAKYENDLLFFIYNREYNDALKLGGIVDGSRDRMAFGHDGEVAGLPALYSWMVPRFWTAA

Uniprot

NA

ProteinModelPortal

NA

PDB

4PC4 E-value=8.5496e-119, Score=1094

KEGG

101743488 no KO assigned | (RefSeq) low molecular mass 30 kDa lipoprotein 21G1-like

GO

GO:0005576 GO:0016020 GO:0016780 GO:0006470 GO:0008138 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

Length:

548

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.5275

Exp number, first 60 AAs:

0.32334

Total prob of N-in:

0.02502

outside

1 - 548

Pi

39.230709

Theta

133.824854

Tajima's D

-0.573423

CLR

0

CSRT

0.229188540572971

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
20149871	GSIIQNVVNNLIIDK	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002
20822545	GSIIQNVVNNLIIDK	100.00	0.002
20822545	YENDVLFFIYNR	100.00	0.002

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree