Gene

KWMTBOMO11896

Pre Gene Modal

BGIBMGA004402

Annotation

PREDICTED:_low_molecular_mass_30_kDa_lipoprotein_21G1-like_[Bombyx_mori]

Location

Bomo_Chr20(-):3229493-3230622      View in EpiBrowser

Full name

Low molecular mass 30 kDa lipoprotein 21G1       + More
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Microvitellogenin      

Location in the cell

Extracellular   Reliability : 3.961

CDS

ATGAAACTTCTCGTGGTGTTCGCAATGTGCGTGCTCGCCGTCAGCGCCAGTGTCGTGGAAATGATCATGGATGGGAACCTCGCTCCCAACCAGGACCTCGAGGAGAAACTGTACAACAGCATCCTCACCGGCAACTACGACAGCGCTGTCGCTCAGAGCTTAGAGCACGAGAGGCAGAACAAGGGTTCCGTCATCCAGAATGTAGTCAACAACCTGATCGTTGACAAAAGACAGAACACCATGGAGTACTGCTACAAGCTCTGGGTCGGCAAAGGGCAGCACATTCTCAGAAAGTACTTTCCTTTAAGCTTTCAACTCAGCATGACCGGAGACTTCGTCAAACTTGTTTACAGAAATTACAAGCTCGCTCTGAAGCTTAGCTGCTATTACTATTTAAATAATGAAAGAATTGCATACGGCGATGGTAAGAACAAGGACCAGGACGATATCAGTTGGAAGTTCATTAGCTTGTGGGAGGACAACAGAGTGTACTTCAAGATATACAACACTAAGTACAACCAGTACTTGAAGATGAGCTCGAAGATTGACTGCAATGCACGTGATCGTATCGCAAAAGGTTCCAACACAGCCGACAGTACCAGCGAGCAGTGGTTCCTCCAGCCCGCGATGTGCGTGCTCGCCGCCAACACCAGTGTCGTGGAAATGATCATGGATGGGAACCTCGCTCCCAACCAGGACCTCGGGGAGAAACTGTACAACGGTTTCTCTGGTCATTTCTGA

Protein

MKLLVVFAMCVLAVSASVVEMIMDGNLAPNQDLEEKLYNSILTGNYDSAVAQSLEHERQNKGSVIQNVVNNLIVDKRQNTMEYCYKLWVGKGQHILRKYFPLSFQLSMTGDFVKLVYRNYKLALKLSCYYYLNNERIAYGDGKNKDQDDISWKFISLWEDNRVYFKIYNTKYNQYLKMSSKIDCNARDRIAKGSNTADSTSEQWFLQPAMCVLAANTSVVEMIMDGNLAPNQDLGEKLYNGFSGHF

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Signal   Secreted   3D-structure  

Feature

chain  Low molecular mass 30 kDa lipoprotein 21G1

Uniprot

H9J4G2   H9J4G3   H9B458   H9J4F5   Q00801   A7LIK7   + More
H9B440   P09335   H9B444   H9J4L7   H9J4F9   H9J4L6   P09338   P09337   Q05432   H9J4M4   H9J4M8   E5EVW2   D4QGC0   H9J4M7   H9J4F6   D4QGB9   C7A8A3   Q6Q0S8   Q00802   H9J4M3   H9B443   P09334   P09336   H9B437   Q17185   C7A8A2   H9J4G1   P19616   Q0VJU3   H9J4M5   H9J4G4   H9B436   H9J4G0   H9B450   H9J4L5   Q75RW3   H9J4G5   A0A0B5Z504   H9B448   E5EVW3   A0A2A4IYY5   A0A2W1BPF5   H9B447   A0A194QYV5   H9B455   A0A194Q636   H9B445   H9JJC0   H9B460   H9B454   H9JJ72   H9B449   H9JMX4   H9J4N3   Q76IB6   B5BSX5   H9JF68   Q2PQU4   H9B451   H9J4L1   H9J4N1   A0A2H1WST8   H9J4N4   A0A3G1LBE0   A0A2A4K904   A0A385HW64   A0A2W1BV38   A0A2A4JTT3   A0A2W1BZD4   H9JX32   H9J4E6   A0A3G1LBD4   H9J4E8   H9B453   H9JXA6   H9B457   H9J4N6   H9B459   H9JL03   H9JVX1   H9JX33   H9J4N5   H9J4E7  

Pubmed

19121390    26078299    1883839    25379889    3342240    1343778    + More
21457781    21514389    22948915    2002509    2583514    2454229    26126120    28756777    26354079    12871935    18840462    17112968    29175381   

EMBL

BABH01021929    JN977543    AFC87823.1    BABH01021941    JN977524    AFC87804.1    + More
X54734    EU024295    ABS71120.1    JN977525    AFC87805.1    X07553    JN977529    AFC87809.1    BABH01021932    BABH01021933    BABH01021935    BABH01021930    X07556    X07555    D12523    BAA02093.1    BABH01021994    JN977526    AFC87806.1    BABH01022000    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    AB553284    BAJ04788.1    BABH01021999    BABH01021937    JN977519    AFC87799.1    AB553283    BAJ04787.1    FJ214661    ACO35751.1    AY568957    AAS75435.1    X54736    BABH01021988    JN977528    AFC87808.1    X07552    X07554    JN977522    AFC87802.1    X54735    CAA38532.1    FJ214660    ACO35750.1    BABH01021931    M28820    J03768    AM293331    CAL25136.1    BABH01021998    JN977527    AFC87807.1    BABH01021925    JN977523    AFC87803.1    JN977521    AFC87801.1    BABH01021934    JN977535    AFC87815.1    AB158646    BAD07027.1    BABH01021921    KM926620    AJI02615.1    JN977533    AFC87813.1    HM012807    ADQ89806.1    NWSH01005147    PCG64400.1    KZ149940    PZC76929.1    BABH01026781    JN977532    AFC87812.1    KQ460930    KPJ10718.1    JN977540    AFC87820.1    KQ459582    KPI98870.1    BABH01028979    JN977530    AFC87810.1    BABH01036437    JN977541    AFC87821.1    JN977545    AFC87825.1    JN977539    AFC87819.1    JN977534    AFC87814.1    BABH01028980    BABH01022003    AB098260    BAC82630.1    AB436163    BAG70410.1    BABH01026782    JN977537    AFC87817.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    JN977536    AFC87816.1    BABH01021908    ODYU01010790    SOQ56108.1    BABH01022005    MF497270    AUB45122.1    NWSH01000017    PCG80765.1    MG799571    AXY55009.1    KZ149893    PZC78918.1    NWSH01000685    PCG74802.1    PZC78944.1    BABH01043627    BABH01022007    MF497269    AUB45121.1    BABH01022004    JN977538    AFC87818.1    BABH01035696    JN977542    AFC87822.1    BABH01022014    JN977544    AFC87824.1    BABH01040631    BABH01043629    BABH01022013    BABH01022006   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268   

PRIDE

H9J4G2    H9J4G3    H9B458    H9J4F5    Q00801    A7LIK7    + More
H9B440    P09335    H9B444    H9J4L7    H9J4F9    H9J4L6    P09338    P09337    Q05432    H9J4M4    H9J4M8    E5EVW2    D4QGC0    H9J4M7    H9J4F6    D4QGB9    C7A8A3    Q6Q0S8    Q00802    H9J4M3    P09334    P09336    H9B437    Q17185    C7A8A2    H9J4G1    H9J4M5    H9J4G4    H9B436    H9J4G0    H9B450    H9J4L5    Q75RW3    H9J4G5    H9B448    E5EVW3    H9B447    H9B455    H9B445    H9JJC0    H9B460    H9B454    H9JJ72    H9B449    H9JMX4    H9J4N3    B5BSX5    H9JF68    Q2PQU4    H9B451    H9J4L1    H9J4N1    H9J4N4    H9JX32    H9J4E6    H9J4E8    H9B453    H9JXA6    H9B457    H9J4N6    H9B459    H9JL03    H9JX33    H9J4N5    H9J4E7   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4G2   H9J4G3   H9B458   H9J4F5   Q00801   A7LIK7   + More
H9B440   P09335   H9B444   H9J4L7   H9J4F9   H9J4L6   P09338   P09337   Q05432   H9J4M4   H9J4M8   E5EVW2   D4QGC0   H9J4M7   H9J4F6   D4QGB9   C7A8A3   Q6Q0S8   Q00802   H9J4M3   H9B443   P09334   P09336   H9B437   Q17185   C7A8A2   H9J4G1   P19616   Q0VJU3   H9J4M5   H9J4G4   H9B436   H9J4G0   H9B450   H9J4L5   Q75RW3   H9J4G5   A0A0B5Z504   H9B448   E5EVW3   A0A2A4IYY5   A0A2W1BPF5   H9B447   A0A194QYV5   H9B455   A0A194Q636   H9B445   H9JJC0   H9B460   H9B454   H9JJ72   H9B449   H9JMX4   H9J4N3   Q76IB6   B5BSX5   H9JF68   Q2PQU4   H9B451   H9J4L1   H9J4N1   A0A2H1WST8   H9J4N4   A0A3G1LBE0   A0A2A4K904   A0A385HW64   A0A2W1BV38   A0A2A4JTT3   A0A2W1BZD4   H9JX32   H9J4E6   A0A3G1LBD4   H9J4E8   H9B453   H9JXA6   H9B457   H9J4N6   H9B459   H9JL03   H9JVX1   H9JX33   H9J4N5   H9J4E7  

PDB

4PC4     E-value=4.55918e-73,     Score=695

KEGG

101743344    no KO assigned | (RefSeq) low molecular mass 30 kDa lipoprotein 21G1-like

GO

GO:0005576   GO:0005615   GO:0016021   GO:0016020   GO:0016780   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 16,         Likelihood:  0.996873

 

 

Length:

246

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.48091999999999

Exp number, first 60 AAs:

6.41601999999999

Total prob of N-in:

0.30807

outside

1  -  246

 

 

Pi

149.70865

Theta

134.946056

Tajima's D

0.384887

CLR

0

CSRT

0.477226138693065

Interpretation

Uncertain