SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11895  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004455
Annotation
low_molecular_mass_30_kDa_lipoprotein_19G1-like_precursor_[Bombyx_mori]
Full name
Low molecular mass 30 kDa lipoprotein 19G1       + More
Low molecular 30 kDa lipoprotein PBMHPC-19      
Microvitellogenin      
Low molecular mass 30 kDa lipoprotein 21G1      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-23      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      
Location in the cell
Extracellular   Reliability : 4.038
 

Sequence

CDS
ATGAAGCCCGTTCTTATCATCCTGTGTCTTTCCGCGGCGTCTTTGTATGCCGACGCAGCCGCCGTCTACAACTCCACTCTAAAGGACGAGCTTTACAACAGCATCCTCGTTGCGGATTACGACAGCGCTGTTGAGAGAAGCAGGCAGATCTACGCGGACAACAACGATGACGTCATCACGGACGTCGTTAACAAACTGATACGAAACAACAAGATGAACTGCATGGAGTACGCCTACCAGCTCTGGCTCCAAGGCTCCAAGGACATTGTTCACGATTGCTTCCCCGTTGAGTTCAGACTTATATTCGCAGAAAACAACATTAAGCTTATGTACAAGCGTCACGGGCTCGCTTTGACGTTGGGCGATTCCGATATAAACGGCAGAATTGCCTTCGGGGATAGCAAGGACAAAACGAGTCCAAGAGTCAGCTGGATGTTCATTCCTCTGTGGGAGAACGACAAGGTCTACTTCAAGATCTTGAACACTAAGCGTAACCAGTACTTGACATTGGGAGTGAACACTAACGGACACGGCGGCCACATGGCCTACGGAGTCAACAGCGTCGACAGTTTCAGAACCCAGTGGTACCTGCAGCCCGCTAAGTACGACAATGACGTCTTGTTCTTCATATACAACCGCGAGTACAGCGAGGCACTGGTGCTCTCTAGGGAAACAGACGGCTCACATAACCGCAGGGCCTTCGGATACAGAGGCCGCGTCGTGGGAAGTCCCGAACATTACGCTTGGGGCATTAAGGCTTTCTAA
Protein
MKPVLIILCLSAASLYADAAAVYNSTLKDELYNSILVADYDSAVERSRQIYADNNDDVITDVVNKLIRNNKMNCMEYAYQLWLQGSKDIVHDCFPVEFRLIFAENNIKLMYKRHGLALTLGDSDINGRIAFGDSKDKTSPRVSWMFIPLWENDKVYFKILNTKRNQYLTLGVNTNGHGGHMAYGVNSVDSFRTQWYLQPAKYDNDVLFFIYNREYSEALVLSRETDGSHNRRAFGYRGRVVGSPEHYAWGIKAF

Summary

Miscellaneous
This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.
Similarity
Belongs to the 30 kDa lipoprotein family.
Keywords
3D-structure   Complete proteome   Lipoprotein   Reference proteome   Signal   Secreted  
Feature
chain  Low molecular mass 30 kDa lipoprotein 19G1
EMBL
JN977535    AFC87815.1    BABH01021929    JN977521    AFC87801.1    BABH01021936    + More
HM012806    JN977520    ADQ89805.1    AFC87800.1    JN977522    AFC87802.1    BABH01021930    BABH01021931    BABH01021932    BABH01021937    JN977519    AFC87799.1    BABH01021933    BABH01021934    FJ214661    ACO35751.1    X54736    X07554    AB553284    BAJ04788.1    AB553283    BAJ04787.1    AY568957    AAS75435.1    BABH01021925    JN977523    AFC87803.1    AM293331    CAL25136.1    M28820    J03768    KM926620    AJI02615.1    BABH01021935    JN977525    AFC87805.1    X54734    X07553    BABH01021941    JN977524    AFC87804.1    X07556    D12523    BAA02093.1    BABH01022000    EU024295    ABS71120.1    BABH01021994    JN977526    AFC87806.1    JN977529    AFC87809.1    JN977528    AFC87808.1    X07552    X54735    CAA38532.1    FJ214660    ACO35750.1    JN977543    AFC87823.1    BABH01021998    JN977527    AFC87807.1    BABH01021988    AB158646    BAD07027.1    BABH01021999    JN977539    AFC87819.1    BABH01028979    JN977530    AFC87810.1    JN977534    AFC87814.1    BABH01028980    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01026781    JN977532    AFC87812.1    JN977545    AFC87825.1    BABH01036437    JN977541    AFC87821.1    JN977536    AFC87816.1    BABH01021921    AB436163    BAG70410.1    X07555    BABH01026782    JN977537    AFC87817.1    BABH01021908    JN977533    AFC87813.1    HM012807    ADQ89806.1    KQ460930    KPJ10718.1    KQ459582    KPI98870.1    NWSH01005147    PCG64400.1    BABH01022003    BABH01022005    JN977540    AFC87820.1    KZ149940    PZC76929.1    JN977542    AFC87822.1    BABH01043627    AB098260    BAC82630.1    BABH01022007    JN977538    AFC87818.1    BABH01022004    MG799571    AXY55009.1    ODYU01010790    SOQ56108.1    KZ149893    PZC78918.1    MF497269    AUB45121.1    MF497270    AUB45122.1    PZC78944.1    BABH01043629    BABH01022014    NWSH01000017    PCG80765.1    JN977544    AFC87824.1    BABH01035696    BABH01022013    NWSH01000685    PCG74802.1    BABH01022006    BABH01040631   
Pfam
PF03260   Lipoprotein_11
Interpro
IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       
SUPFAM
SSF50370   SSF50370       
Gene 3D
PDB
3PUB     E-value=7.89848e-96,     Score=892

Ontologies

Topology

Subcellular location
  
SignalP
Position:   1 - 19,         Likelihood:  0.997106
 
 
Length:
254
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.34722000000001
Exp number, first 60 AAs:
2.34108
Total prob of N-in:
0.07886
outside
1  -  254
 
 

Population Genetic Test Statistics

Pi
197.338709
Theta
201.802506
Tajima's D
-0.126419
CLR
0
CSRT
0.339283035848208
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
23174119 -.DIVRDCFPVEFR.- 100.00 7e-06
26280517 VVEPGEAADQIVDAVR 100.00 7e-04
26280517 DIVEAHYR 100.00 8e-04
28467696 DIVFITNPDQR 100.00 8e-04
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