Gene

KWMTBOMO11892  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004454

Annotation

low_molecular_mass_30_kDa_lipoprotein_21G1-like_precursor_[Bombyx_mori]

Location

Bomo_Chr20(+):3186903-3198943      View in EpiBrowser

Full name

Low molecular mass 30 kDa lipoprotein 21G1       + More
Low molecular 30 kDa lipoprotein PBMHPC-23      
Microvitellogenin      
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Nuclear   Reliability : 3.977

CDS

ATGTCGGTTGAAGCAAGTGATTCTGGCAAATCCGACCGAAAACTATACAATTCAGTAATTACCGCTGACTACGATGATGCAACCAAAAGATGCGAGCAACTTCAATCCGAACCGGATGGTTCGTACATCATAAAGAACACAGTTACCGAGCTGCTTAACAATGCCGAATCTAACACAATTAATTTCTCTTACAAACTATGGACCACTGGGCACCAAAATATAGTTCAAAGTTGTTTCCCATTAGAGTTCAGACTGATACTAGACGATAAGAAGGACTGTAAAATTATTAACAAGCATGACGATCTGTACATGACTCTGAGCAAGGATCTAGACCAAAATGGTGATAGAGACGCATATGGCGACGAGGACGACCATAAGAACAGTTGGAAGTTTATGTCCTCGTGGGAATCGAACAGAGTTTATTTCAAAATCTTTAACCCGAAATACAATCAACGTTTGAAAATGGGTGATCCTGTGAAGGACGATGAGCGTAAAGTGTTCTCATCTGACGATGCTACAGACAGCACAAGTCAATGGTACCTGCAGGCGATGAATCACAAAGGCGACCTTTTATTTTTCATATTCAATCGCAGATACTCGCAGGCCCTGAAGATCGGTAAGGACGTTGTGAACAACGAGGATTTCAGGATATATGGCGAGAGCGAAGATGCTGCCGAGAAGCCACATTATTTCGGTTGGTTAATTGAGCCAATGTAA

Protein

MSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSEPDGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDHKNSWKFMSSWESNRVYFKIFNPKYNQRLKMGDPVKDDERKVFSSDDATDSTSQWYLQAMNHKGDLLFFIFNRRYSQALKIGKDVVNNEDFRIYGESEDAAEKPHYFGWLIEPM

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Signal   Secreted   3D-structure  

Feature

chain  Low molecular mass 30 kDa lipoprotein 21G1

Uniprot

H9B448   E5EVW3   Q00801   H9J4F5   P09338   A7LIK7   + More
H9B444   H9J4M8   P19616   Q0VJU3   H9J4M4   P09335   Q05432   D4QGB9   C7A8A3   H9J4F6   H9J4F9   H9B440   D4QGC0   Q6Q0S8   P09336   E5EVW2   H9J4G3   H9J4L6   A0A0B5Z504   H9B458   Q00802   H9J4M3   H9B450   H9J4M5   H9J4L5   Q17185   H9B443   P09334   H9B454   H9B436   H9J4M7   H9B437   C7A8A2   H9J4G1   H9J4G0   H9B445   Q2PQU4   Q75RW3   H9JJC0   H9B447   H9J4G4   H9J4L7   H9J4L1   H9J4E6   H9J4N1   H9B460   H9B457   H9J4G2   H9JF68   H9J4G5   B5BSX5   H9JX33   A0A385HW64   H9B449   H9JMX4   H9J4E7   H9B451   P09337   H9B455   H9JJ72   H9J4N3   H9J4N4   H9JX32   H9JXA6   H9J4N6   A0A194QYV5   H9B459   A0A2W1BPF5   H9J4N5   Q76IB6   A0A2A4IYY5   H9J4E8   H9B453   H9JL03   H9JVX1   A0A2A4JTT3   A0A3G1LBE0   A0A2A4K904   A0A194Q636   A0A2H1WST8   A0A2W1BZD4   H9B462   A0A2W1BV38   A0A3G1LBD4  

Pubmed

26078299    19121390    21457781    1883839    3342240    25379889    + More
2583514    2454229    1343778    21514389    22948915    26126120    2002509    17112968    18840462    26354079    28756777    12871935    29175381   

EMBL

JN977533    AFC87813.1    BABH01021925    HM012807    ADQ89806.1    X54734    + More
BABH01021941    JN977524    AFC87804.1    X07556    EU024295    ABS71120.1    JN977529    AFC87809.1    BABH01022000    M28820    J03768    AM293331    CAL25136.1    BABH01021994    JN977526    AFC87806.1    X07553    D12523    BAA02093.1    AB553283    BAJ04787.1    FJ214661    ACO35751.1    BABH01021937    JN977519    AFC87799.1    BABH01021935    JN977525    AFC87805.1    AB553284    BAJ04788.1    AY568957    AAS75435.1    X07554    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    BABH01021929    BABH01021930    KM926620    AJI02615.1    JN977543    AFC87823.1    X54736    BABH01021988    JN977535    AFC87815.1    BABH01021998    JN977527    AFC87807.1    X54735    CAA38532.1    JN977528    AFC87808.1    X07552    JN977539    AFC87819.1    JN977521    AFC87801.1    BABH01021999    JN977522    AFC87802.1    FJ214660    ACO35750.1    BABH01021931    BABH01021932    BABH01021933    BABH01021934    BABH01028979    JN977530    AFC87810.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    AB158646    BAD07027.1    BABH01036437    JN977541    AFC87821.1    BABH01026781    JN977532    AFC87812.1    JN977523    AFC87803.1    BABH01021908    BABH01022007    BABH01022003    JN977545    AFC87825.1    JN977542    AFC87822.1    BABH01026782    JN977537    AFC87817.1    BABH01021921    AB436163    BAG70410.1    BABH01043629    MG799571    AXY55009.1    JN977534    AFC87814.1    BABH01028980    BABH01022006    JN977536    AFC87816.1    X07555    JN977540    AFC87820.1    BABH01022005    BABH01043627    BABH01035696    BABH01022014    KQ460930    KPJ10718.1    JN977544    AFC87824.1    KZ149940    PZC76929.1    BABH01022013    AB098260    BAC82630.1    NWSH01005147    PCG64400.1    BABH01022004    JN977538    AFC87818.1    BABH01040631    NWSH01000685    PCG74802.1    MF497270    AUB45122.1    NWSH01000017    PCG80765.1    KQ459582    KPI98870.1    ODYU01010790    SOQ56108.1    KZ149893    PZC78944.1    JN977547    AFC87827.1    PZC78918.1    MF497269    AUB45121.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268   

PRIDE

H9B448    E5EVW3    Q00801    H9J4F5    P09338    A7LIK7    + More
H9B444    H9J4M8    H9J4M4    P09335    Q05432    D4QGB9    C7A8A3    H9J4F6    H9J4F9    H9B440    D4QGC0    Q6Q0S8    P09336    E5EVW2    H9J4G3    H9J4L6    H9B458    Q00802    H9J4M3    H9B450    H9J4M5    H9J4L5    Q17185    P09334    H9B454    H9B436    H9J4M7    H9B437    C7A8A2    H9J4G1    H9J4G0    H9B445    Q2PQU4    Q75RW3    H9JJC0    H9B447    H9J4G4    H9J4L7    H9J4L1    H9J4E6    H9J4N1    H9B460    H9B457    H9J4G2    H9JF68    H9J4G5    B5BSX5    H9JX33    H9B449    H9JMX4    H9J4E7    H9B451    P09337    H9B455    H9JJ72    H9J4N3    H9J4N4    H9JX32    H9JXA6    H9J4N6    H9B459    H9J4N5    H9J4E8    H9B453    H9JL03    H9B462   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9B448   E5EVW3   Q00801   H9J4F5   P09338   A7LIK7   + More
H9B444   H9J4M8   P19616   Q0VJU3   H9J4M4   P09335   Q05432   D4QGB9   C7A8A3   H9J4F6   H9J4F9   H9B440   D4QGC0   Q6Q0S8   P09336   E5EVW2   H9J4G3   H9J4L6   A0A0B5Z504   H9B458   Q00802   H9J4M3   H9B450   H9J4M5   H9J4L5   Q17185   H9B443   P09334   H9B454   H9B436   H9J4M7   H9B437   C7A8A2   H9J4G1   H9J4G0   H9B445   Q2PQU4   Q75RW3   H9JJC0   H9B447   H9J4G4   H9J4L7   H9J4L1   H9J4E6   H9J4N1   H9B460   H9B457   H9J4G2   H9JF68   H9J4G5   B5BSX5   H9JX33   A0A385HW64   H9B449   H9JMX4   H9J4E7   H9B451   P09337   H9B455   H9JJ72   H9J4N3   H9J4N4   H9JX32   H9JXA6   H9J4N6   A0A194QYV5   H9B459   A0A2W1BPF5   H9J4N5   Q76IB6   A0A2A4IYY5   H9J4E8   H9B453   H9JL03   H9JVX1   A0A2A4JTT3   A0A3G1LBE0   A0A2A4K904   A0A194Q636   A0A2H1WST8   A0A2W1BZD4   H9B462   A0A2W1BV38   A0A3G1LBD4  

PDB

4PC4     E-value=1.303e-38,     Score=398

KEGG

101746088    no KO assigned | (RefSeq) low molecular mass 30 kDa lipoprotein 21G1-like

GO

GO:0005576   GO:0005615   GO:0016021   GO:0016020   GO:0016780   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

Length:

238

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00138

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05125

outside

1  -  238

 

 

Pi

149.358465

Theta

131.067391

Tajima's D

0.19866

CLR

0.440108

CSRT

0.427928603569821

Interpretation

Uncertain