Gene

KWMTBOMO11891

Pre Gene Modal

BGIBMGA004405

Annotation

PREDICTED:_low_molecular_mass_30_kDa_lipoprotein_21G1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(-):3169834-3172972      View in EpiBrowser

Full name

Low molecular 30 kDa lipoprotein PBMHPC-23       + More
Low molecular 30 kDa lipoprotein PBMHP-12      
Low molecular mass 30 kDa lipoprotein 21G1      
Microvitellogenin      
Low molecular mass 30 kDa lipoprotein 19G1      
Low molecular 30 kDa lipoprotein PBMHPC-19      
Low molecular 30 kDa lipoprotein PBMHP-6      
Low molecular 30 kDa lipoprotein PBMHPC-21      

Location in the cell

Extracellular   Reliability : 1.911

CDS

ATGCTTTCGACGGAGTGTCTAATTTTCTTGTTGTGCGCTGCGTCAGCATCGATTTCTCAAACTGACTGGGATCTCGAAGATAAAATTTACGTGGAAGTTTCCTCAGCAAGCTATGAGGAAGCCATAGCCACAGCACAAGAGCTGATCTCGAATAACAAAAGCACCGTAGTACGGGATGCAGTGAAATTATTAATGCACAACAAAGTCCGAAATTCAATGGAATTCGCTTACAAACTGTGGCAGTCCGGCAATTCGGAGATTGTAAGAAAACAATTCCCGGTTGCGTTTGAGACAATTTTAGGCGGAGATTATGTGAACTTCATAGACTATGAATACGGGAAAGCTTTAAAGCTCGGCTACAAAACAGATCGGAATGCCGAGAGAACAGCTTACGGCGATAAGTACGAGAGGATCAGTAACATAGTTGCGTGGAGGTTATTGCCTTTTTGGGAAGACGGTAGACTGTTTTTCAAGATTCTTAATAAGGAATACAACGAATATTTGAAGCTGGATACGATTACAAATCACGCAGGGGACCACAGGGCGTCTGCTGGCAGTTCGCCTTCGGATGCCGCGTACCACTGGTACCTTCACCCAGTTGATTTTTTGGACCAGACCTTGTTTTTTGTCTATAACAGGCAATACAGACAGGCCCTGAAGCTGAGTCGTCAGACCGGTCTGGACGGAGGTTACAATGTTTTCGGACACAATGGCGACGCCATTAACGACCTCGATATCCACGCTTGGTCCGTTTCGTCGTTGTGA

Protein

MLSTECLIFLLCAASASISQTDWDLEDKIYVEVSSASYEEAIATAQELISNNKSTVVRDAVKLLMHNKVRNSMEFAYKLWQSGNSEIVRKQFPVAFETILGGDYVNFIDYEYGKALKLGYKTDRNAERTAYGDKYERISNIVAWRLLPFWEDGRLFFKILNKEYNEYLKLDTITNHAGDHRASAGSSPSDAAYHWYLHPVDFLDQTLFFVYNRQYRQALKLSRQTGLDGGYNVFGHNGDAINDLDIHAWSVSSL

Miscellaneous

This lipoprotein belongs to the group of structurally related '30 kDa proteins' that comprise major protein components of the fifth (and last) instar larvae and of pupae.
Biosynthesis occurs in a stage-dependent fashion in the fat body.

Similarity

Belongs to the 30 kDa lipoprotein family.

Keywords

Complete proteome   Lipoprotein   Reference proteome   Secreted   Signal   3D-structure  

Feature

chain  Low molecular 30 kDa lipoprotein PBMHPC-23

Uniprot

H9J4G5   H9J4F5   A7LIK7   P09338   H9B444   P09335   + More
Q00801   H9B440   H9J4G3   A0A0B5Z504   H9J4F9   H9B458   P19616   Q0VJU3   H9J4L6   H9J4F6   C7A8A3   E5EVW2   Q00802   H9J4M4   D4QGB9   Q05432   Q6Q0S8   P09336   D4QGC0   H9B450   H9B454   H9B437   H9B436   H9J4G1   H9J4L5   H9B445   Q2PQU4   H9J4M8   H9J4L1   H9B443   P09334   C7A8A2   H9J4G0   H9J4M7   H9B447   H9J4M5   Q17185   H9J4G4   H9J4M3   H9JJC0   H9J4L7   Q75RW3   A0A2W1BPF5   A0A2A4IYY5   A0A2H1WST8   H9J4G2   A0A194QYV5   A0A194Q636   A0A385HW64   Q76IB6   H9JXA6   P09337   H9B451   H9JF68   H9B460   A0A2A4K904   H9B449   H9JMX4   B5BSX5   A0A2W1BZD4   A0A3G1LBE0   H9B455   E5EVW3   H9B448   H9JX32   H9J4E6   H9JJ72   H9J4N4   H9J4N3   H9J4N6   H9B459   H9J4N1   H9JL03   A0A2A4JTT3   A0A2W1BV38   A0A3G1LBD4   H9JVX1   H9B457   H9JX33   H9B453   H9J4E8   H9J4E7   H9J4N5  

Pubmed

19121390    26078299    25379889    3342240    1883839    26126120    + More
2583514    2454229    21457781    21514389    22948915    1343778    17112968    2002509    28756777    26354079    12871935    18840462    29175381   

EMBL

BABH01021921    BABH01021941    JN977524    AFC87804.1    EU024295    ABS71120.1    + More
X07556    JN977529    AFC87809.1    X07553    X54734    JN977525    AFC87805.1    BABH01021929    KM926620    AJI02615.1    BABH01021935    JN977543    AFC87823.1    M28820    J03768    AM293331    CAL25136.1    BABH01021930    BABH01021937    JN977519    AFC87799.1    FJ214661    ACO35751.1    BABH01021936    HM012806    JN977520    ADQ89805.1    AFC87800.1    X54736    BABH01021994    JN977526    AFC87806.1    AB553283    BAJ04787.1    D12523    BAA02093.1    AY568957    AAS75435.1    X07554    AB553284    BAJ04788.1    JN977535    AFC87815.1    JN977539    AFC87819.1    JN977522    AFC87802.1    JN977521    AFC87801.1    BABH01021931    BABH01021932    BABH01028979    JN977530    AFC87810.1    BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01022000    BABH01021908    JN977528    AFC87808.1    X07552    FJ214660    ACO35750.1    BABH01021933    BABH01021934    BABH01021999    BABH01026781    JN977532    AFC87812.1    BABH01021998    JN977527    AFC87807.1    X54735    CAA38532.1    BABH01021925    JN977523    AFC87803.1    BABH01021988    BABH01036437    JN977541    AFC87821.1    AB158646    BAD07027.1    KZ149940    PZC76929.1    NWSH01005147    PCG64400.1    ODYU01010790    SOQ56108.1    KQ460930    KPJ10718.1    KQ459582    KPI98870.1    MG799571    AXY55009.1    AB098260    BAC82630.1    BABH01035696    X07555    JN977536    AFC87816.1    BABH01026782    JN977537    AFC87817.1    JN977545    AFC87825.1    NWSH01000017    PCG80765.1    JN977534    AFC87814.1    BABH01028980    AB436163    BAG70410.1    KZ149893    PZC78944.1    MF497270    AUB45122.1    JN977540    AFC87820.1    HM012807    ADQ89806.1    JN977533    AFC87813.1    BABH01043627    BABH01022007    BABH01022005    BABH01022003    BABH01022014    JN977544    AFC87824.1    NWSH01000685    PCG74802.1    PZC78918.1    MF497269    AUB45121.1    BABH01040631    JN977542    AFC87822.1    BABH01043629    JN977538    AFC87818.1    BABH01022004    BABH01022006    BABH01022013   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268   

PRIDE

H9J4G5    H9J4F5    A7LIK7    P09338    H9B444    P09335    + More
Q00801    H9B440    H9J4G3    H9J4F9    H9B458    H9J4L6    H9J4F6    C7A8A3    E5EVW2    Q00802    H9J4M4    D4QGB9    Q05432    Q6Q0S8    P09336    D4QGC0    H9B450    H9B454    H9B437    H9B436    H9J4G1    H9J4L5    H9B445    Q2PQU4    H9J4M8    H9J4L1    P09334    C7A8A2    H9J4G0    H9J4M7    H9B447    H9J4M5    Q17185    H9J4G4    H9J4M3    H9JJC0    H9J4L7    Q75RW3    H9J4G2    H9JXA6    P09337    H9B451    H9JF68    H9B460    H9B449    H9JMX4    B5BSX5    H9B455    E5EVW3    H9B448    H9JX32    H9J4E6    H9JJ72    H9J4N4    H9J4N3    H9J4N6    H9B459    H9J4N1    H9JL03    H9B457    H9JX33    H9B453    H9J4E8    H9J4E7    H9J4N5   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF50370   SSF50370       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9J4G5   H9J4F5   A7LIK7   P09338   H9B444   P09335   + More
Q00801   H9B440   H9J4G3   A0A0B5Z504   H9J4F9   H9B458   P19616   Q0VJU3   H9J4L6   H9J4F6   C7A8A3   E5EVW2   Q00802   H9J4M4   D4QGB9   Q05432   Q6Q0S8   P09336   D4QGC0   H9B450   H9B454   H9B437   H9B436   H9J4G1   H9J4L5   H9B445   Q2PQU4   H9J4M8   H9J4L1   H9B443   P09334   C7A8A2   H9J4G0   H9J4M7   H9B447   H9J4M5   Q17185   H9J4G4   H9J4M3   H9JJC0   H9J4L7   Q75RW3   A0A2W1BPF5   A0A2A4IYY5   A0A2H1WST8   H9J4G2   A0A194QYV5   A0A194Q636   A0A385HW64   Q76IB6   H9JXA6   P09337   H9B451   H9JF68   H9B460   A0A2A4K904   H9B449   H9JMX4   B5BSX5   A0A2W1BZD4   A0A3G1LBE0   H9B455   E5EVW3   H9B448   H9JX32   H9J4E6   H9JJ72   H9J4N4   H9J4N3   H9J4N6   H9B459   H9J4N1   H9JL03   A0A2A4JTT3   A0A2W1BV38   A0A3G1LBD4   H9JVX1   H9B457   H9JX33   H9B453   H9J4E8   H9J4E7   H9J4N5  

PDB

4PC4     E-value=1.71333e-43,     Score=441

KEGG

101743208    no KO assigned | (RefSeq) low molecular 30 kDa lipoprotein PBMHP-12-like

GO

GO:0005576   GO:0005615   GO:0016021   GO:0016020   GO:0016780   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

  

SignalP

Position:   1 - 19,         Likelihood:  0.913670

 

 

Length:

254

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01613

Exp number, first 60 AAs:

0.00838

Total prob of N-in:

0.00694

outside

1  -  254

 

 

Pi

232.852068

Theta

192.734213

Tajima's D

0.655093

CLR

0.022784

CSRT

0.556522173891305

Interpretation

Uncertain