Gene

KWMTBOMO11883

Pre Gene Modal

BGIBMGA004407

Annotation

PREDICTED:_serine/threonine-protein_phosphatase_2A_regulatory_subunit_B''_subunit_gamma-like_[Papilio_xuthus]

Location

Bomo_Chr20(-):2849079-2854357      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.108 Nuclear   Reliability : 1.917

CDS

ATGTCTGATAAAGAAAAAGAAGTGAAAAATAAGGGCAGTGGAACCGACATTAGTGCTTCTGGGGACGCCAAGCTGCCGAACGAACAGGACACCAAATTGAATAATATTTTGAAAAACAGACTCAAAAAATACATTAAAAAACTAGACGATACTGGAACGAGCATAACAAAACAAGAAAGTGAAACAATTGAAGTGGAGACATTCAAGGAACTTTATCAACCCAAATTGGACAATGATGAATCTTACAAAAGCATACCTAAATTTTACTACAAATTACCCCGTAATGATGATGTCCTAGCACAGAAACTACGAGAAGAAACTCGAGCACAATTTCTGCAGAAGAAGAGCAAGGAGCTACTCGATAATGCTGAGTTGAAACATCTCTGGACCCTGTTAGAGAAGACCAACGGGAATTACAGCAGCTCCAACAATGATGAGTTGATCATAGACTATTTTCAATTTAAGAAGATCAGAGAAGAAGCTGGACCTAAATATAGACCGTATTTCACAGCAGAAGTTTTTGGACGTCTGCAAGCAGCCGAAGGCAGTGTTGGCAGGATTCGTGCTGTCTCTCTATTCAACTATGTTATGAGACGAGTGTGGCTGCAGCAGACGAGAATCGGACTATCTCTCTATGATGTTACGGGACAAGGCTATCTCACTGAGCAAGATTTGGAGAGTTACATAGCAGAGTTAGTCCCGTCTCTGGCAGCTCTAGACGGTCTGGACTCATCATTCACCTCGTTCTACGTATGCACGGCAGCGAGGAAGTTCCTTTTCTTCCTCGACCCACTACGGATCGGACGTGTAAGGATCAGCGACGTCCTATCCTGTTCTTTCTTAGATGATTTACTTGAGCTCCGCGAAGAAGACCTACCGATGGAGTTGCAAGAGCAGAACTGGTTCAGTGCGGCCTCGGCGCTACGCGTCTACGGGCAGTACTTGAACTTGGACAGAGACCACAACGGGATGCTGAGTATAAACGAACTGGCCGGCTACGGCTCCGGCACCCTGACCCAGGCCTTCCTCCAGCGCGTCTTCCAGCAGTGCCTCACGTACGACGGCGAGATGGACTACAAGACGTACCTGGACCTGGTCCTCGCCCTCGAGAACCGGAAGCAGCCCGCCGCGCTCGCCTATCTGTTCAGAGTGTTGGACATCAATTCCGTGGGCTACCTCGACGCTTTCACCTTGAATTATTTCTTTAAGGCGATACAGAAACAGATGATAGCCCACGGAGCCGAGCCGGTCAATTTCGATGATGTGAAAGACGAGATATTCGACATGATCCGACCTAAAGACCCGACCAAGATCACACTTCAAGACCTGGTGAGGAGTGGTCACGGGCACACCGCAGTCTCCATACTGCTGGAGCTGCACGGCTTCTGGGCTTACGAGAACAGGGAGGCTCTGGCAGCCGCCGATCACAACACTTGA

Protein

MSDKEKEVKNKGSGTDISASGDAKLPNEQDTKLNNILKNRLKKYIKKLDDTGTSITKQESETIEVETFKELYQPKLDNDESYKSIPKFYYKLPRNDDVLAQKLREETRAQFLQKKSKELLDNAELKHLWTLLEKTNGNYSSSNNDELIIDYFQFKKIREEAGPKYRPYFTAEVFGRLQAAEGSVGRIRAVSLFNYVMRRVWLQQTRIGLSLYDVTGQGYLTEQDLESYIAELVPSLAALDGLDSSFTSFYVCTAARKFLFFLDPLRIGRVRISDVLSCSFLDDLLELREEDLPMELQEQNWFSAASALRVYGQYLNLDRDHNGMLSINELAGYGSGTLTQAFLQRVFQQCLTYDGEMDYKTYLDLVLALENRKQPAALAYLFRVLDINSVGYLDAFTLNYFFKAIQKQMIAHGAEPVNFDDVKDEIFDMIRPKDPTKITLQDLVRSGHGHTAVSILLELHGFWAYENREALAAADHNT

Uniprot

H9J4G7   A0A2A4JBK4   A0A2H1WCM2   A0A3S2NH87   A0A194Q6T0   A0A151JUA9   + More
A0A151I5W2   F4WQ39   A0A195ECB1   A0A026VTW9   A0A151WY83   A0A088AKV4   E9IVY9   A0A2A3EQ06   A0A310SF10   E2C5X1   A0A158NWX3   A0A151IHK7   A0A232EVV4   K7IVQ5   A0A0C9R6H0   A0A1W4WM29   A0A1A8QLM1   A0A1A8N2S4   A0A1A8GA33   A0A1W4WC00   A0A0T6B6C7   A0A1W4WN15   A0A1A8L071   A0A1A8ECX3   A0A3Q2DK31   A0A091VHQ1   A0A1A7XC04   A0A0S7H4X1   A0A091RJT3   A0A3B3YJC9   A0A087Y6Q6   A0A3B3W0V1   A0A1A8ALT4   A0A3L8SZM7   A0A091VA88   M4A4K4   A0A3P9NUE0   A0A182WR69   A0A091W2Y8   A0A1A7Z462   A0A147AC67   A0A067QG16   A0A091KQ41   A0A0A0APB2   A0A091TDQ2   A0A093NUM4   A0A091SQX2   A0A093PYR4   K7FKL5   F1N899   A0A091KFD7   A0A091RUY1   A0A093HIK3   A0A091HIR1   A0A3Q1IAN5   A0A3Q1BL98   A0A3P8RTV7   W5MS39   A0A182V0K7   A0A182TZ59   A0A3Q3KP34   A0A091F370   A0A3S2PBA2   A0A091PPZ8   M3XCC3   A0A3Q1CKV4   A0A3B3DFK7   A0A3P8RTW7   A0A2U3VWK2   I3MD47   A0A384CC12   F6UYZ0   A0A3Q0EIS5   A0A3Q7Y025   A0A151NLA0   A0A0F8CDN0   R0LTB0   M7B129   A0A0B8RVK9   A0A287A1B6   A0A2Y9QYR7   A0A2Y9DL05   A0A1V4KFC1   A0A091P3P3   A0A3Q7TYE4   A0A2I4CCV6   U3ISV4   U3JU09   G5B115   A0A384CD71   G1MAT2   E2RNM2   G3T4I2  

Pubmed

19121390    26354079    21719571    24508170    21282665    20798317    + More
21347285    28648823    20075255    30282656    23542700    24845553    17381049    15592404    17975172    29451363    19892987    22293439    25835551    23624526    30723633    23749191    21993625    20010809    16341006   

EMBL

BABH01021894    NWSH01002109    PCG69146.1    ODYU01007766    SOQ50818.1    RSAL01000039    + More
RVE51002.1    KQ459460    KPJ00710.1    KQ981799    KYN35689.1    KQ976434    KYM87203.1    GL888262    EGI63662.1    KQ979074    KYN22860.1    KK107921    EZA47243.1    KQ982651    KYQ52839.1    GL766449    EFZ15273.1    KZ288195    PBC33787.1    KQ765323    OAD53978.1    GL452863    EFN76662.1    ADTU01002984    KQ977586    KYN01680.1    NNAY01001950    OXU22473.1    GBYB01002361    GBYB01002363    JAG72128.1    JAG72130.1    HAEH01012129    HAEI01014774    SBR94009.1    HAEF01021997    HAEG01006854    SBR63156.1    HAEB01020707    HAEC01001347    SBQ67234.1    LJIG01009774    KRT82407.1    HAED01018320    HAEE01017244    SBR37294.1    HADZ01009188    HAEA01015298    SBQ43778.1    KK733992    KFR01993.1    HADW01014236    SBP15636.1    GBYX01445353    JAO36079.1    KK818601    KFQ39209.1    AYCK01001343    HADY01017153    HAEJ01015575    SBP55638.1    QUSF01000004    RLW10209.1    KK421149    KFQ86593.1    KL410344    KFQ96183.1    HADX01015375    SBP37607.1    GCES01010242    JAR76081.1    KK853541    KDR06877.1    KK537708    KFP29904.1    KL872281    KGL94890.1    KK446689    KFQ71855.1    KL224798    KFW63852.1    KK482797    KFQ61009.1    KL671375    KFW81908.1    AGCU01049778    AGCU01049779    AGCU01049780    AGCU01049781    AGCU01049782    AGCU01049783    AADN05000303    KK502300    KFP22451.1    KK934204    KFQ46430.1    KL206140    KFV79275.1    KL536880    KFO94712.1    AHAT01003900    KK719449    KFO63711.1    CM012458    RVE57006.1    KK643413    KFP97382.1    AANG04004459    AGTP01026094    AGTP01026095    AGTP01026096    AGTP01026097    AGTP01026098    AGTP01026099    AGTP01026100    AKHW03002792    KYO37265.1    KQ042255    KKF16965.1    KB742730    EOB05010.1    KB548684    EMP30749.1    GBZA01000507    JAG69261.1    AEMK02000056    DQIR01032834    DQIR01209816    HCZ88309.1    LSYS01003385    OPJ83170.1    KK667498    KFQ02235.1    ADON01038359    AGTO01010443    JH167915    GEBF01003135    EHB02976.1    JAO00498.1    ACTA01051676    ACTA01059676    AAEX03005671   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000078541    UP000078540    + More
UP000007755    UP000078492    UP000053097    UP000075809    UP000005203    UP000242457    UP000008237    UP000005205    UP000078542    UP000215335    UP000002358    UP000192223    UP000265020    UP000053605    UP000261480    UP000028760    UP000261500    UP000276834    UP000002852    UP000242638    UP000076407    UP000053283    UP000265000    UP000027135    UP000053858    UP000054081    UP000053258    UP000007267    UP000000539    UP000053119    UP000053584    UP000265040    UP000257160    UP000265080    UP000018468    UP000075903    UP000075902    UP000261600    UP000052976    UP000011712    UP000261560    UP000245340    UP000005215    UP000261680    UP000002281    UP000189704    UP000286642    UP000050525    UP000031443    UP000008227    UP000248480    UP000190648    UP000286640    UP000192220    UP000016666    UP000016665    UP000006813    UP000008912    UP000002254    UP000007646   

PRIDE

H9J4G7   

Pfam

PF17958   EF-hand_13

Interpro

IPR039865   PPP2R3C        + More
IPR011992   EF-hand-dom_pair       
IPR018247   EF_Hand_1_Ca_BS       
IPR041534   EF-hand_13       
IPR002048   EF_hand_dom       

SUPFAM

SSF47473   SSF47473       

ProteinModelPortal

H9J4G7   A0A2A4JBK4   A0A2H1WCM2   A0A3S2NH87   A0A194Q6T0   A0A151JUA9   + More
A0A151I5W2   F4WQ39   A0A195ECB1   A0A026VTW9   A0A151WY83   A0A088AKV4   E9IVY9   A0A2A3EQ06   A0A310SF10   E2C5X1   A0A158NWX3   A0A151IHK7   A0A232EVV4   K7IVQ5   A0A0C9R6H0   A0A1W4WM29   A0A1A8QLM1   A0A1A8N2S4   A0A1A8GA33   A0A1W4WC00   A0A0T6B6C7   A0A1W4WN15   A0A1A8L071   A0A1A8ECX3   A0A3Q2DK31   A0A091VHQ1   A0A1A7XC04   A0A0S7H4X1   A0A091RJT3   A0A3B3YJC9   A0A087Y6Q6   A0A3B3W0V1   A0A1A8ALT4   A0A3L8SZM7   A0A091VA88   M4A4K4   A0A3P9NUE0   A0A182WR69   A0A091W2Y8   A0A1A7Z462   A0A147AC67   A0A067QG16   A0A091KQ41   A0A0A0APB2   A0A091TDQ2   A0A093NUM4   A0A091SQX2   A0A093PYR4   K7FKL5   F1N899   A0A091KFD7   A0A091RUY1   A0A093HIK3   A0A091HIR1   A0A3Q1IAN5   A0A3Q1BL98   A0A3P8RTV7   W5MS39   A0A182V0K7   A0A182TZ59   A0A3Q3KP34   A0A091F370   A0A3S2PBA2   A0A091PPZ8   M3XCC3   A0A3Q1CKV4   A0A3B3DFK7   A0A3P8RTW7   A0A2U3VWK2   I3MD47   A0A384CC12   F6UYZ0   A0A3Q0EIS5   A0A3Q7Y025   A0A151NLA0   A0A0F8CDN0   R0LTB0   M7B129   A0A0B8RVK9   A0A287A1B6   A0A2Y9QYR7   A0A2Y9DL05   A0A1V4KFC1   A0A091P3P3   A0A3Q7TYE4   A0A2I4CCV6   U3ISV4   U3JU09   G5B115   A0A384CD71   G1MAT2   E2RNM2   G3T4I2  

PDB

4I5N     E-value=1.68859e-20,     Score=246

KEGG

101745272    K11583 serine/threonine-protein phosphatase 2A regulatory subunit B'' | (RefSeq) serine/threonine-pr

PATHWAY

03015    mRNA surveillance pathway - Bombyx mori (domestic silkworm)

GO

GO:0035303   GO:0005509   GO:0045579   GO:0005829   GO:0005634   GO:0048536   GO:0001782   GO:0005794   GO:0043029   GO:0051900   GO:0002759   GO:0032147   GO:0005813   GO:0005819   GO:0030865   GO:0000226  

PANTHER

PTHR12085  

Length:

478

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.64823

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01600

outside

1  -  478

 

 

Pi

257.792771

Theta

182.862139

Tajima's D

1.386632

CLR

0.487184

CSRT

0.760061996900155

Interpretation

Uncertain