Gene

KWMTBOMO11872

Pre Gene Modal

BGIBMGA004409

Annotation

PREDICTED:_dystonin-like_[Bombyx_mori]

Location

Bomo_Chr20(-):2510156-2587372      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.979 Nuclear   Reliability : 1.575

CDS

ATGCTCTCGCGATGCGACGCCATGTGGCACGATGTTTCGCAGAGTGAGAGCAAACATTTATGTTGGAACGAACGTGACGCTATACAGAAGAAGACGTTTACAAAATGGGTCAACAAACATCTCAAAAAGGTGAATCGTCACGTGAACGATCTGTTCGAGGACCTACGCGATGGACTGAACCTCATCTCGCTGCTGGAGGTGCTATCTGGCGAACATCTCCCGCGCGAGCGAGGTCGCATGCGTTTCCATATGCTGCAAAACGTCCAAATGGCCCTGGACTTCCTCCGCTACAAGAAAATCAAGCTCGTCAACATCAGAGCTGAGGATATCGTCGACGGGAACCCAAAGCTGACCCTAGGTCTGATCTGGACTATCATCCTGCACTTCCAGATATCAGACATCGTCGTTGGACAAGAACCAAACGTGACGGCCCGGGAAGCTCTCCTGAGCTGGGCCCGACGCTCCACGGCCAAGTACCCTGGGGTGAGGGTGAGCGACTTCACGTCTTCTTGGAGAGACGGGCTCGCCTTCAACGCGCTCATACACAGGAACCGCCCTGATCTGATAGACTGGCGTAATATCAGATCAAGACAAGTCCGTGAGCGCTTGGAGACAGCCTTCCATGTAGTCGAAAAGGAATATGGAGTCACCAGACTGTTGGATCCTGAAGACGTGGACACCCACGAGCCGGACGAGAAGTCCCTCATCACGTACATCTCGTCGCTGTACGAGACGTTCCCGGAGCCCCCGGCCGTGCATCCGCTGTTCGACGCGGAGTCCCAGCGCCGGGCGGCCGCTTACACCGAGCAGGCGGCCCAACATCGCGCTTGGCTGCACGAGAAATGCGCGCTAATGCAGGACCGTGCTTTCCCGTCAACTTTGATAGAAATGAAGAAGCTGCTCAGCGAGAGCACGCGGTTCCGCAACGAGGAGGTGCCGCTCAGGCAGAGAGAGAAGCAGAAGCTCGTCCACCAGTACAGGGAGTTAGAGAAATATTTCGAAACAGTGGGCGAGTGCGATATCGAGCCGACGCTGCGCCCCGAGGCGCTGGAGCAGGGCTGGGCGCGGCTGCTGATGGCGCAGCAGGAGCGGGAGCGCGACCTCACCGACGAGATTCGGCGCCTCGAGCGCCTGCAGAGACTGGCCGAGAAACTGCACAGGACAGGTGGGCGAGCAAAGGCTCAGCCAGGAGGGGTGGGATTTGCTAACAGCTACCCGAGCGCCTCCGAAGGAGACCTAACAACTCAAGAGTAG

Protein

MLSRCDAMWHDVSQSESKHLCWNERDAIQKKTFTKWVNKHLKKVNRHVNDLFEDLRDGLNLISLLEVLSGEHLPRERGRMRFHMLQNVQMALDFLRYKKIKLVNIRAEDIVDGNPKLTLGLIWTIILHFQISDIVVGQEPNVTAREALLSWARRSTAKYPGVRVSDFTSSWRDGLAFNALIHRNRPDLIDWRNIRSRQVRERLETAFHVVEKEYGVTRLLDPEDVDTHEPDEKSLITYISSLYETFPEPPAVHPLFDAESQRRAAAYTEQAAQHRAWLHEKCALMQDRAFPSTLIEMKKLLSESTRFRNEEVPLRQREKQKLVHQYRELEKYFETVGECDIEPTLRPEALEQGWARLLMAQQERERDLTDEIRRLERLQRLAEKLHRTGGRAKAQPGGVGFANSYPSASEGDLTTQE

Uniprot

A0A2A4JLN2   A0A1B6CHK9   A0A1B6DH81   A0A0J7LAV9   A0A1B6IBM2   A0A2S2QQ63   + More
A0A1B6IXE3   A0A0C9QN10   A0A158NZ71   J9JXK1   A0A1W4VBS6   A0A1W4VBK1   A0A1W4VNK7   A0A1W4VNL7   A0A1W4VPV2   A0A1W4VPY7   A0A1W4VNJ7   A0A1W4VBV6   A0A1W4VP97   A0A1W4VPA7   A0A1W4VBL2   O77291   A0A0R1DVL9   A0A0R1DPU2   Q7KAJ2   A0A0P9C0S0   A0A0P8XRG3   A0A0P9C0N9   A0A0Q9W381   A0A0J9RCA5   A0A0J9RC92   A0A0J9RCB8   A0A0J9RDA9   A0A0P8XRF1   A0A0P8XRG7   A0A0P8XRH0   B3MHF6   A0A0P9AH49   A0A1W4VPA2   A0A0J9RDD8   A0A0J9U1A2   A0A0J9RC98   A0A0J9RC94   A0A0J9RC61   A0A0J9U195   A0A0J9U1C1   A0A0R3NT93   B5E0Y2   A0A0R3NV70   A0A0R3NN21   A0A0P8YDY3   A0A0P8XRH9   A0A0P8XRF3   A0A0J9RC91   A0A3B0JN78   A0A0R3NV84   A0A0R3NTI5   A0A0R3NMS9   A0A0R3NTT7   A0A0R3NMS3   A0A0R3NT60   A0A0R1DPS3   A0A0R1DPR4   A0A0R1DVQ3   A0A0Q5VM47   A0A0Q5VNZ6   A0A0Q5VP41   A0A0Q5W1R5   A0A0Q5VYY7   A0A0Q5VMU0   A0A0Q5VMB9   A0A0Q5VWZ7   A0A0Q5VWX9   A0A0R3NMW6   A0A0R1DPV1   A0A0R1DPR5   A0A0R1DPN8   A0A0R1DWR4   A0A0R1DPP7   A0A0Q5VME2   A0A0Q5VUT1   A0A0Q5W1M6   A0A0Q5VM70   A0A0Q5VMY8   A0A0Q5VWW2   A0A0R1DPX8   A0A0R1DPS0   A0A0R1DWS8   A0A0R1DPP6   B7YZG4   A1Z9J1   A1Z9I9   A0A0Q9XCM4   A1Z9I8   E1JH63   B7YZG2   B7YZG3   E1JH62   A0A0Q9X458   A0A0Q9X2T9  

Pubmed

21347285    9832555    17994087    17550304    22936249    15632085    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

NWSH01001123    PCG72484.1    GEDC01024493    JAS12805.1    GEDC01012249    JAS25049.1    + More
LBMM01000039    KMR05210.1    GECU01032355    GECU01023404    JAS75351.1    JAS84302.1    GGMS01010467    MBY79670.1    GECU01016186    GECU01000894    JAS91520.1    JAT06813.1    GBYB01004949    JAG74716.1    ADTU01003969    ADTU01003970    ADTU01003971    ADTU01003972    ABLF02029484    AJ011924    CAA09869.1    CM000158    KRJ99257.1    KRJ99287.1    AJ011925    CAA09870.1    CH902619    KPU77163.1    KPU77142.1    KPU77127.1    CH940648    KRF79464.1    CM002911    KMY93606.1    KMY93628.1    KMY93616.1    KMY93604.1    KPU77139.1    KPU77167.1    KPU77170.1    EDV37956.1    KPU77150.1    KMY93629.1    KMY93595.1    KMY93601.1    KMY93627.1    KMY93602.1    KMY93590.1    KMY93615.1    CM000071    KRT02317.1    EDY69063.1    KRT02294.1    KRT02313.1    KPU77144.1    KPU77160.1    KPU77133.1    KMY93596.1    OUUW01000001    SPP75019.1    KRT02310.1    KRT02325.1    KRT02302.1    KRT02288.1    KRT02312.1    KRT02285.1    KRJ99274.1    KRJ99275.1    KRJ99249.1    CH954179    KQS62685.1    KQS62668.1    KQS62700.1    KQS62703.1    KQS62686.1    KQS62694.1    KQS62688.1    KQS62699.1    KQS62683.1    KRT02295.1    KRJ99260.1    KRJ99285.1    KRJ99263.1    KRJ99254.1    KRJ99269.1    KQS62704.1    KQS62677.1    KQS62671.1    KQS62701.1    KQS62673.1    KQS62667.1    KRJ99255.1    KRJ99276.1    KRJ99266.1    KRJ99295.1    KRJ99270.1    KRJ99272.1    KRJ99259.1    KRJ99267.1    AE013599    ACL83112.1    AAF58319.3    AAG22268.2    CH933808    KRG05401.1    AAF58317.1    ACZ94421.1    ACL83113.1    ACL83111.1    ACZ94420.1    CH964154    KRF99122.1    KRF99120.1   

Proteomes

UP000218220    UP000036403    UP000005205    UP000007819    UP000192221    UP000002282    + More
UP000007801    UP000008792    UP000001819    UP000268350    UP000008711    UP000000803    UP000009192    UP000007798   

PRIDE

O77291    Q7KAJ2    B7YZG4    A1Z9J1    A1Z9I9    A1Z9I8    + More
B7YZG3    E1JH62   

Pfam

PF00307   CH        + More
PF17902   SH3_10
PF00681   Plectin
PF00435   Spectrin
PF02187   GAS2

Interpro

IPR002017   Spectrin_repeat        + More
IPR001589   Actinin_actin-bd_CS       
IPR001101   Plectin_repeat       
IPR041615   Desmoplakin_SH3       
IPR035915   Plakin_repeat_sf       
IPR018159   Spectrin/alpha-actinin       
IPR036872   CH_dom_sf       
IPR001715   CH-domain       
IPR030269   Plectin       
IPR003660   HAMP_dom       
IPR003108   GAR_dom       
IPR036534   GAR_dom_sf       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR001452   SH3_domain       
IPR036028   SH3-like_dom_sf       

SUPFAM

SSF75399   SSF75399        + More
SSF47576   SSF47576       
SSF143575   SSF143575       
SSF47473   SSF47473       
SSF50044   SSF50044       

Gene 3D

1.10.418.10     3.90.1290.10     3.30.920.20    

CDD

cd00014  CH
cd00051  EFh

ProteinModelPortal

A0A2A4JLN2   A0A1B6CHK9   A0A1B6DH81   A0A0J7LAV9   A0A1B6IBM2   A0A2S2QQ63   + More
A0A1B6IXE3   A0A0C9QN10   A0A158NZ71   J9JXK1   A0A1W4VBS6   A0A1W4VBK1   A0A1W4VNK7   A0A1W4VNL7   A0A1W4VPV2   A0A1W4VPY7   A0A1W4VNJ7   A0A1W4VBV6   A0A1W4VP97   A0A1W4VPA7   A0A1W4VBL2   O77291   A0A0R1DVL9   A0A0R1DPU2   Q7KAJ2   A0A0P9C0S0   A0A0P8XRG3   A0A0P9C0N9   A0A0Q9W381   A0A0J9RCA5   A0A0J9RC92   A0A0J9RCB8   A0A0J9RDA9   A0A0P8XRF1   A0A0P8XRG7   A0A0P8XRH0   B3MHF6   A0A0P9AH49   A0A1W4VPA2   A0A0J9RDD8   A0A0J9U1A2   A0A0J9RC98   A0A0J9RC94   A0A0J9RC61   A0A0J9U195   A0A0J9U1C1   A0A0R3NT93   B5E0Y2   A0A0R3NV70   A0A0R3NN21   A0A0P8YDY3   A0A0P8XRH9   A0A0P8XRF3   A0A0J9RC91   A0A3B0JN78   A0A0R3NV84   A0A0R3NTI5   A0A0R3NMS9   A0A0R3NTT7   A0A0R3NMS3   A0A0R3NT60   A0A0R1DPS3   A0A0R1DPR4   A0A0R1DVQ3   A0A0Q5VM47   A0A0Q5VNZ6   A0A0Q5VP41   A0A0Q5W1R5   A0A0Q5VYY7   A0A0Q5VMU0   A0A0Q5VMB9   A0A0Q5VWZ7   A0A0Q5VWX9   A0A0R3NMW6   A0A0R1DPV1   A0A0R1DPR5   A0A0R1DPN8   A0A0R1DWR4   A0A0R1DPP7   A0A0Q5VME2   A0A0Q5VUT1   A0A0Q5W1M6   A0A0Q5VM70   A0A0Q5VMY8   A0A0Q5VWW2   A0A0R1DPX8   A0A0R1DPS0   A0A0R1DWS8   A0A0R1DPP6   B7YZG4   A1Z9J1   A1Z9I9   A0A0Q9XCM4   A1Z9I8   E1JH63   B7YZG2   B7YZG3   E1JH62   A0A0Q9X458   A0A0Q9X2T9  

PDB

4Z6G     E-value=6.56793e-95,     Score=887

KEGG

101742624    K10382 dystonin | (RefSeq) dystonin-like

GO

GO:0005856   GO:0003779   GO:0007010   GO:0016021   GO:0007165   GO:0005509   GO:0008017   GO:0035371   GO:0007424   GO:0035149   GO:0001578   GO:0005737   GO:0030036   GO:0016203   GO:0016319   GO:0016199   GO:0007026   GO:0035147   GO:0030175   GO:0048813   GO:0030516   GO:0045169   GO:0030426   GO:0045773   GO:0007475   GO:0000235   GO:0005874   GO:0000226   GO:0007409   GO:0007017   GO:0051491   GO:0008092   GO:0005912   GO:0016204   GO:0044295   GO:0030716   GO:0005927   GO:0007423   GO:0043622   GO:0007391   GO:0005515   GO:0006470   GO:0008138   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR23169:SF20  

Length:

417

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03722

Exp number, first 60 AAs:

8e-05

Total prob of N-in:

0.01148

outside

1  -  417

 

 

Pi

182.691473

Theta

168.231388

Tajima's D

0.074609

CLR

0.253803

CSRT

0.392280385980701

Interpretation

Uncertain