SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11861
Pre Gene Modal
BGIBMGA004438
Annotation
PREDICTED:_ethanolaminephosphotransferase_1-like_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.908
 

Sequence

CDS
ATGTTCAATTACAAATATTTATCACGCGAACACTTGGAGGGCTTCGACAATTACAAGTACATGGCGATCGACACGAGCCCTCTCAGTGTTTATGTCATGCACCCATTTTGGAACAAAGTTGTGGAACTTGTGCCAAAATGGATTGCACCAAATGTACTAACGTTTGCCGGATTCATGTTGGTTGTGCTCAATTTCCTGATGCTGTCATACTATGATTATGATTACTATGCTGCCAGCTTCTCAGCTAACAATGCAACATTAATTGATGCAACTACAAATGGCTATGAGGAAGTCATACCGAAATCACTGTGGTTCATAATTGCCGTATTTCTATTTCTTGCTTATACCCTAGACGGTATTGATGGGAAGCAAGCTAGACGCACCCAGACATCGGGACCGCTTGGGGAACTATTTGACCACGGTCTCGATTCATACACGGTATTCTTCATACCGGCCTGTCTATATTCTATATTTGGTCGATCGGATTACTCTATTCCGCCTATTAGGATTTATTACGTGATGTGGAATCTCTTATTGAATTTTTATTTGAGTCACTGGGAGAAATATAATACAGGGGTTCTGTTCCTGCCTTGGGGCTATGATTTTAGTATGTGGGCTTCAACCCTATGCTTCATATGGACCGGTGTTAACGGTACCTTGTTCTACAAGAAATATATCTACGGCAGTATGACGCTGGCGCACGGATTCGAACTGGCGATATACGGAACGGGAGTCGTCACCAACCTGCCAGTGGCGCTGTACAATATTAATAAGTCTTACAAGGAACGAACGGGTAAGATGCGTTCCCTCTCTGAAGCTCTAAGGCCGCTCTGGTCCTTCACATCCGTGTTCGTCATCAGCTCCGTGTGGGTGCACTGCAGCGCGCGGCTGCCGGACTACGACCTGAGGATGCTCTTCCTGTTGATCGGAACTCTGTTCAGTAACGTAGCGTGTCGTCTAATCGTCAGTCAAATGAGCAATCAACGGTGCGAAGCTATCAACTGGCTGACGTGGCCCCTGCTGGTCAGTGCTACGGTGTCATTGACACTGCCAGAGTACGAGCCGACAGCGTTCTATGGCTTCACTATGCTCACTCTATTCGCTCACATTCACTACGGAACCTGCGTTGTACGCCAGATGTGCGACCATTTCCGGGTCAGCTGTTTCCACATAAAGCAGCGTGCGGATTGA
Protein
MFNYKYLSREHLEGFDNYKYMAIDTSPLSVYVMHPFWNKVVELVPKWIAPNVLTFAGFMLVVLNFLMLSYYDYDYYAASFSANNATLIDATTNGYEEVIPKSLWFIIAVFLFLAYTLDGIDGKQARRTQTSGPLGELFDHGLDSYTVFFIPACLYSIFGRSDYSIPPIRIYYVMWNLLLNFYLSHWEKYNTGVLFLPWGYDFSMWASTLCFIWTGVNGTLFYKKYIYGSMTLAHGFELAIYGTGVVTNLPVALYNINKSYKERTGKMRSLSEALRPLWSFTSVFVISSVWVHCSARLPDYDLRMLFLLIGTLFSNVACRLIVSQMSNQRCEAINWLTWPLLVSATVSLTLPEYEPTAFYGFTMLTLFAHIHYGTCVVRQMCDHFRVSCFHIKQRAD

Summary

Similarity
Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
EMBL
BABH01021847    BABH01021848    BABH01021849    BABH01021850    KZ149924    PZC77626.1    + More
NWSH01001730    PCG70307.1    KQ459460    KPJ00732.1    KQ460547    KPJ14042.1    AGBW02005668    OWR55268.1    ODYU01003468    SOQ42289.1    GDQN01011670    JAT79384.1    KQ976401    KYM92513.1    GL888182    EGI65651.1    KQ981490    KYN41085.1    ADTU01013259    ADTU01013260    GL439579    EFN67042.1    KQ414670    KOC64367.1    GL445346    EFN89734.1    KQ978023    KYM97859.1    KQ979851    KYN18858.1    KK107388    EZA51494.1    KQ460009    KPJ18457.1    KPJ00706.1    KQ762329    OAD55978.1    ATLV01018382    KE525231    KFB43078.1    KQ434781    KZC04486.1    KZ288204    PBC33265.1    CH477219    EAT47404.1    GFDL01013984    JAV21061.1    GFDL01013694    JAV21351.1    GFDL01013771    JAV21274.1    AAAB01008984    GFDL01014014    JAV21031.1    GANO01002397    JAB57474.1    APCN01003368    EAA14893.3    AXCM01000336    GEBQ01023650    JAT16327.1    DS232036    EDS32733.1    KQ971354    KYB26463.1    JXUM01026690    KQ560764    KXJ80976.1    QOIP01000001    RLU26765.1    GEDC01029793    GEDC01026733    GEDC01019054    GEDC01014582    GEDC01013858    GEDC01010262    GEDC01004490    GEDC01000474    JAS07505.1    JAS10565.1    JAS18244.1    JAS22716.1    JAS23440.1    JAS27036.1    JAS32808.1    JAS36824.1    UFQT01000093    SSX19610.1    GFDF01002654    JAV11430.1    AGBW02009026    OWR51833.1    GFDF01002655    JAV11429.1    IACF01003794    LAB69403.1    GAMC01019308    JAB87247.1    JRES01001455    KNC22733.1    GDQN01007501    JAT83553.1    KQ435798    KOX73386.1    GDIQ01119694    GDIQ01009909    JAN84828.1    LRGB01000389    KZS19295.1    GFTR01005589    JAW10837.1    GAKP01011227    GAKP01011226    GAKP01011225    JAC47727.1    GDIP01173682    JAJ49720.1    QCYY01002250    ROT71779.1    GDIP01011376    JAM92339.1    GBBI01000994    JAC17718.1    AAAB01008944    DS235797    EEB17164.1    KA646029    AFP60658.1    KA649425    AFP64054.1    EAA10178.4    CH933807    EDW13205.2    APCN01000708    LJIJ01000137    ODN01851.1    JXJN01010943    JXJN01010944    KK852611    KDR20264.1    KA649433    AFP64062.1    KA649426    KA649427    AFP64055.1    LNIX01000001    OXA64206.1    GGFL01000816    MBW64994.1    ACPB03011978    GAHY01001791    JAA75719.1    GGFL01000817    MBW64995.1    KZ150066    PZC74136.1   
Pfam
PF01066   CDP-OH_P_transf        + More
PF00595   PDZ
PF00564   PB1
Interpro
IPR000462   CDP-OH_P_trans        + More
IPR014472   CHOPT       
IPR000270   PB1_dom       
IPR001478   PDZ       
IPR036034   PDZ_sf       
SUPFAM
SSF50156   SSF50156       

Ontologies

Topology

Length:
396
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
189.13624
Exp number, first 60 AAs:
14.64382
Total prob of N-in:
0.76610
POSSIBLE N-term signal
sequence
inside
1  -  46
TMhelix
47  -  69
outside
70  -  102
TMhelix
103  -  120
inside
121  -  140
TMhelix
141  -  158
outside
159  -  167
TMhelix
168  -  186
inside
187  -  192
TMhelix
193  -  215
outside
216  -  234
TMhelix
235  -  257
inside
258  -  276
TMhelix
277  -  294
outside
295  -  303
TMhelix
304  -  323
inside
324  -  331
TMhelix
332  -  351
outside
352  -  354
TMhelix
355  -  377
inside
378  -  396
 
 

Population Genetic Test Statistics

Pi
256.866687
Theta
164.224542
Tajima's D
-0.760649
CLR
16.750841
CSRT
0.184440777961102
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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