SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11859  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004421
Annotation
tubulointerstitial_nephritis_antigen_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.967
 

Sequence

CDS
ATGGCGAACATGTTTCTAGTCGTCTTAGTTCTGCCATTGCTGTCATCTTGCTTGGCGTACTCCGGTCCAGAATTGCTCAACGGCCGGTACTGCGCCGCGCGTCCAGACGACAATAAATGCTGCTACAATCGAAAAGACGATTGCTCAGTGCCGATATTGGGTACTCTCTGCTATTGCGACGAGTTCTGTGATCACACAAGACACCACGATGACTGCTGTCCCGATTACAAGAAAGTATGCAGCCCACCTCAGATAACCTCAGTATCGTGCGAATACGAGCAACAGACTTATGCACCGGACGATCAAGTTAACAAAGGCTGCAATCTGTGTACATGTAAAGTCGATAATGACAACAACGCGTATTGGTCGTGCACTCAAGACACGTGCATGATGAGCGAGGACCTGGTGAACGACGTTAACCAACAAGGGACCACTTGGAGAGCTACAACCTACCCCGAGTTCAACGAGAAGAAACTCAAAGACGGACTAATATATAAACTTGGAACGTTCCCGTTGAACGTGACCGTTATCAGCTACAGCAAGGACGGCCAGTATCCAGATGAGTTTGACGCCAGACGAGAATGGTACGGATACATCAGTCCCATCGCCGACCAGGGCTGGTGCGGGTCTGATTGGGCCGTGTCCATTGCCAGCATTGTCGGCGATAGATTTTCGATTCAATCTTTTGGAACTGAAAACGTAAGGATGAGCTCTCAGACACTCCTCTCTTGTCATTTGAAAGGCCAGCGTGGTTGCAACGGCGGTAACCTGGACATCGCTTTTGACTTTGTCAAGACACACGGCTTGGTCAGCGAGCAGTGTTTCCCTTACGAAGGCGCTGTCACTCAATGTAGAATTGGCAATGACTGCCGGCGGTACAGAGTCGGAGTTCCCTTCAGCATCAGCAAAGAAGAAGACATCATGTACGACATCATGACTTCGGGACCTGCGCTGGGTATAATGACGGTGTACCAAGATTTCTTCCACTACCGAGAAGGTATATACCGTCACACCAGGCACGGGGATCAGCTGATGCGCGGCCTCCACAGCGTGAGGATCGTGGGTTGGGGAGAGGACGCCGAAGATAAATATTGGATCGTGGCCAACAGCTGGGGAACGTCGTGGGGCGAGAAGGGTTATTTCCGCATTGCCCGCGGCCACAGCGGCACCGGCATTGAGTCCTCTGTACTCACCGTCCTCCCTTACGTGAGCTAA
Protein
MANMFLVVLVLPLLSSCLAYSGPELLNGRYCAARPDDNKCCYNRKDDCSVPILGTLCYCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCTCKVDNDNNAYWSCTQDTCMMSEDLVNDVNQQGTTWRATTYPEFNEKKLKDGLIYKLGTFPLNVTVISYSKDGQYPDEFDARREWYGYISPIADQGWCGSDWAVSIASIVGDRFSIQSFGTENVRMSSQTLLSCHLKGQRGCNGGNLDIAFDFVKTHGLVSEQCFPYEGAVTQCRIGNDCRRYRVGVPFSISKEEDIMYDIMTSGPALGIMTVYQDFFHYREGIYRHTRHGDQLMRGLHSVRIVGWGEDAEDKYWIVANSWGTSWGEKGYFRIARGHSGTGIESSVLTVLPYVS

Summary

Similarity
Belongs to the peptidase C1 family.
EMBL
DQ251192    ABB71105.1    AK401227    BAM17849.1    KZ149924    PZC77629.1    + More
GDQN01004745    JAT86309.1    AGBW02009482    OWR50713.1    ODYU01012495    SOQ58833.1    NWSH01002808    PCG67501.1    GEZM01002387    JAV97279.1    KP303301    AJF94900.1    GL450384    EFN81067.1    CH477212    EAT47672.1    GL767043    EFZ14296.1    KK852423    KDR24232.1    LJIG01000906    KRT86034.1    GL440604    EFN65753.1    GFDF01005790    JAV08294.1    GFDF01005791    JAV08293.1    GFDF01005792    JAV08292.1    QOIP01000003    RLU24513.1    KK107419    EZA51031.1    GBBM01006390    JAC29028.1    KQ982566    KYQ54774.1    GFAA01000821    JAU02614.1    KQ976407    KYM91408.1    KQ981276    KYN43672.1    AAAB01008807    EAA04576.4    EDO64511.1    KQ971352    KYB26628.1    APCN01000224    GFDL01006149    JAV28896.1    GL887645    EGI70570.1    GAPW01001330    JAC12268.1    GFDL01006158    JAV28887.1    GDQN01002781    JAT88273.1    DS235357    EEB15187.1    KQ977220    KYN04882.1    CVRI01000067    CRL06874.1    GAKP01014009    GAKP01014008    JAC44943.1    GAPW01001331    JAC12267.1    DS232019    EDS32075.1    GBXI01016406    GBXI01006445    GBXI01005732    JAC97885.1    JAD07847.1    JAD08560.1    KC282403    AGX25160.1    GDHF01028202    GDHF01000977    JAI24112.1    JAI51337.1    KQ414613    KOC68959.1    GEDV01005309    JAP83248.1    KZ288269    PBC29937.1    NNAY01000536    OXU27815.1    GFPF01000835    MAA11981.1    GBYB01006526    JAG76293.1    GBYB01006529    JAG76296.1    AXCM01001132    AJWK01002734    AJWK01002735    GACK01007769    JAA57265.1    KYB26629.1    KQ978543    KYN30198.1    AXCN02000591    KQ434864    KZC09063.1    APGK01055486    APGK01055487    KB741266    ENN71509.1    PYGN01000480    PSN45620.1    JI171667    ADY45327.1    CMVM020000016    KQ761768    OAD57094.1    ADTU01004265    OUUW01000001    SPP75097.1    GBBK01002553    JAC21929.1    GDIP01062054    JAM41661.1    CH954179    EDV55570.1    KQS62340.1    GDIP01131704    JAL72010.1    GDIP01187045    LRGB01001001    JAJ36357.1    KZS14202.1    GDIQ01189964    JAK61761.1    GAMC01012247    GAMC01012246    GAMC01012245    JAB94308.1    CH480824    EDW56742.1    GDIQ01099643    JAL52083.1    GDIQ01023923    JAN70814.1    AY060922    AAL28470.1    CM000158    EDW92101.1    KRK00321.1    CM000071    EAL26244.1    KRT02935.1    CH479183    EDW35947.1    AE013599    AY113377    AAF46818.2    AAM29382.1    AAM68213.1    CH902619    EDV35728.1    KPU75797.1    KRT02936.1    CCAG010010028    CM002911    KMY95745.1    KMY95746.1    GFXV01002780    MBW14585.1   
Pfam
PF00112   Peptidase_C1        + More
PF01033   Somatomedin_B
Interpro
IPR025660   Pept_his_AS        + More
IPR038765   Papain-like_cys_pep_sf       
IPR000668   Peptidase_C1A_C       
IPR025661   Pept_asp_AS       
IPR001212   Somatomedin_B_dom       
IPR036024   Somatomedin_B-like_dom_sf       
SUPFAM
SSF54001   SSF54001        + More
SSF90188   SSF90188       
PDB
1MIR     E-value=3.06989e-36,     Score=381

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.999542
 
 
Length:
404
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.84787999999999
Exp number, first 60 AAs:
6.76933
Total prob of N-in:
0.33629
outside
1  -  404
 
 

Population Genetic Test Statistics

Pi
21.847875
Theta
161.239531
Tajima's D
0.139806
CLR
1.002726
CSRT
0.407879606019699
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
25044914 REWPHNWETFISDIVGASK 100.00 1e-15
27102218 IVGWGEDAEDKYWIVANSWGTSWGEK 100.00 3e-13
28467696 KVCIVSGDASAPDIAISPEDR 100.00 3e-13
29197581 KDDCSVPIIGTICYCDEFCDHTR 100.00 3e-13
27102218 GHSGTGIESSVITVIPYVS 100.00 5e-13
29197581 DDCSVPIIGTICYCDEFCDHTR 100.00 5e-13
26822097 CPEAIFQPSFIGMEACGIHETTYNSIMK 100.00 2e-12
26280517 VCMWADQVPECK 100.00 2e-12
28467696 VCSADQSYIAIINTK 100.00 2e-12
29197581 KVCSPPQITSVSCEYEQQTYAPDDQVNK 100.00 2e-12
28467696 YAYETIIQQEHYTEVAHSTSVR 100.00 1e-04
29197581 VCSPPQITSVSCEYEQQTYAPDDQVNK 100.00 1e-04
26280517 DGQSTMTVDRQPK 100.00 0.018
27102218 VGVPFSISK 100.00 0.018
28467696 DGQYPDEFDAR 100.00 0.018
29197581 DGQYPDEFDAR 100.00 0.018
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