Gene

KWMTBOMO11855

Pre Gene Modal

BGIBMGA004436

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like?_partial_[Papilio_machaon]

Location

Bomo_Chr20(+):2126533-2149255      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.963

CDS

ATGGGCGAAGACACACCATCGAACGCCCCCGTCACGGAGACGGAAGTATCCTGGATGGCGTCCATCATGTTCATATTCGCACCGATCGCCGTCTTCATCTATGGCATTGCTGCTGACAAGTTCGGAAGGAAAAATGCTCTTCTCTGCTGCTCTATTCCGATTGCTGTCGGCTGGATGATAAAGTTAATATCGGCACATCCAATTGCCCTGATCGGGGCCCGGGCGTTCATTGGCTTCGGTGCTGGAGGAGCCTTCGTGGTCTGCCCCCTGTACGTCAAGGAGATCAGCGAAGACAGCATCAGAGGAATGACCGGAACCTTTGTTGTTTTTTCACAAACTGCTGGAAACCTTCTAGTGTTCATCTTGGGTGATTTTCTACCGTTCAACACCGTGCTGTGGATACTGCTGGCCATCCCCGTGGTGCACTTCTGTGTATTCCTGAAGCTGCCGGAAACACCATCCTACCTCATCAAGTGCGGAAAAAATGAAGAAACAAGGAAGGTTATCGGTTGGCTCCGTTCGTTGCCTAAGGACCATAAGCTGGTCAATGAGGAAATTGATCGGCTTATCGTTGAGCAGACCACATGCGAGCCGAAGTTCTCTCCAAAATTATTATGTGAGTTAATAATTTTATTATTTACTAGCTGA

Protein

MGEDTPSNAPVTETEVSWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIAVGWMIKLISAHPIALIGARAFIGFGAGGAFVVCPLYVKEISEDSIRGMTGTFVVFSQTAGNLLVFILGDFLPFNTVLWILLAIPVVHFCVFLKLPETPSYLIKCGKNEETRKVIGWLRSLPKDHKLVNEEIDRLIVEQTTCEPKFSPKLLCELIILLFTS

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4J6   A0A2H1WGI4   A0A3S2TIH7   A0A212FAG2   A0A2A4J8P9   A0A0N1PHR0   + More
A0A194Q5B9   A0A2W1BRA6   A0A0L7KMJ0   A0A0L7L0N1   A0A3S2L5Q4   A0A2W1BHU7   A0A194Q5M1   A0A194QQ84   A0A212FI50   A0A2A4JHM3   A0A2H1WE18   A0A2W1BQ47   A0A0N1IHX2   A0A194QB83   A0A2H1WK34   A0A2H1WQ53   A0A2A4J7G4   A0A212FB89   A0A2H1WJJ9   A0A2H1X046   A0A212EX46   A0A0N1IIG7   A0A0L7L525   A0A2A4JII3   H9JVU3   A0A2W1BV28   A0A194Q5F6   A0A2A4JNL8   A0A3S2TMD3   A0A212F931   A0A2Z5U782   A0A212EZE7   A0A0N1IJR5   A0A2A4J9N1   A0A2A4JKE4   A0A194Q5D6   A0A2M3Z428   A0A2M4A7E4   A0A2M3Z412   A0A2M4A739   A0A2M4A741   A0A2M3ZH26   A0A2W1BTH5   A0A212F0M2   A0A212F0G4   A0A2H1WM77   A0A2M4CQF1   W5JMX1   A0A0L7L9U3   A0A2M4CQC1   A0A1Q3FRY2   A0A1Q3FRU2   A0A0A9X9R8   A0A2M4BLL7   A0A2M4BLK9   A0A146L3L7   H9JFD3   A0A0N0PEG1   A0A182F539   B0WPL1   A0A194QBF3   A0A182P8A2   A0A182JZA6   A0A182SEK5   A0A182XNP0   A0A1S4GZI9   Q7PWP0   A0A182JME0   A0A336LM27   A0A182NGP0   A0A182QRF9   A0A182LMV4   A0A182VUC8   A0A182I799   A0A182UZ66   A0A182UH29   A0A182TXA5   A0A182MPL4   A0A182RSI8   H9JVT8   A0A154PHJ7   A0A084W7N7   A0A182YRN8   A0A0P6IW52   A0A182GCW7   H9J4P6   A0A1A9W0R8   A0A182IRD4   A0A182QXE9   A0A2J7R8M9  

Pubmed

19121390    22118469    26354079    28756777    26227816    20920257    + More
23761445    25401762    26823975    12364791    20966253    24438588    25244985    26999592    26483478   

EMBL

BABH01021836    ODYU01008186    SOQ51574.1    RSAL01000114    RVE46930.1    AGBW02009482    + More
OWR50710.1    NWSH01002620    PCG67830.1    KQ460654    KPJ12970.1    KQ459460    KPJ00738.1    KZ149924    PZC77632.1    JTDY01008567    KOB64513.1    JTDY01003914    KOB68834.1    RSAL01000132    RVE46342.1    KZ150034    PZC74659.1    KPJ00847.1    KQ461181    KPJ07673.1    AGBW02008435    OWR53407.1    NWSH01001423    PCG71276.1    ODYU01008039    SOQ51308.1    KZ149937    PZC77108.1    KQ460009    KPJ18480.1    KPJ00686.1    ODYU01009188    SOQ53440.1    ODYU01010219    SOQ55189.1    NWSH01002833    PCG67464.1    AGBW02009367    OWR50987.1    ODYU01008759    SOQ52634.1    ODYU01012350    SOQ58622.1    AGBW02011864    OWR46004.1    KQ459838    KPJ19742.1    JTDY01002946    KOB70431.1    NWSH01001270    PCG71905.1    BABH01040655    KZ149954    PZC76506.1    KPJ00782.1    NWSH01001033    PCG73010.1    RSAL01000053    RVE50024.1    AGBW02009650    OWR50256.1    AP017499    BBB06788.1    AGBW02011317    OWR46831.1    KPJ19754.1    NWSH01002244    PCG68837.1    PCG71903.1    KPJ00762.1    GGFM01002530    MBW23281.1    GGFK01003378    MBW36699.1    GGFM01002508    MBW23259.1    GGFK01003278    MBW36599.1    GGFK01003296    MBW36617.1    GGFM01007009    MBW27760.1    PZC76507.1    AGBW02011050    OWR47308.1    AGBW02011078    OWR47246.1    ODYU01009532    SOQ54032.1    GGFL01003355    MBW67533.1    ADMH02001096    ETN64119.1    JTDY01002032    KOB72273.1    GGFL01003356    MBW67534.1    GFDL01004852    JAV30193.1    GFDL01004839    JAV30206.1    GBHO01026885    GBRD01008360    JAG16719.1    JAG57461.1    GGFJ01004829    MBW53970.1    GGFJ01004828    MBW53969.1    GDHC01015631    JAQ02998.1    BABH01038297    KPJ19738.1    DS232026    EDS32412.1    KPJ00761.1    AAAB01008984    EAA14882.4    UFQT01000043    SSX18775.1    AXCN02002080    APCN01003374    AXCM01000345    BABH01040665    BABH01040666    BABH01040667    KQ434899    KZC10964.1    ATLV01021268    KE525315    KFB46231.1    GDUN01000734    JAN95185.1    JXUM01054849    KQ561839    KXJ77384.1    BABH01022059    AXCN02002516    NEVH01006721    PNF37175.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000218220    UP000053240    UP000053268    + More
UP000037510    UP000000673    UP000069272    UP000002320    UP000075885    UP000075881    UP000075901    UP000076407    UP000007062    UP000075880    UP000075884    UP000075886    UP000075882    UP000075920    UP000075840    UP000075903    UP000075902    UP000075883    UP000075900    UP000076502    UP000030765    UP000076408    UP000069940    UP000249989    UP000091820    UP000235965   

PRIDE

H9J4J6    H9JVU3    H9JFD3    H9JVT8    H9J4P6   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR036259   MFS_trans_sf       
IPR003663   Sugar/inositol_transpt       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4J6   A0A2H1WGI4   A0A3S2TIH7   A0A212FAG2   A0A2A4J8P9   A0A0N1PHR0   + More
A0A194Q5B9   A0A2W1BRA6   A0A0L7KMJ0   A0A0L7L0N1   A0A3S2L5Q4   A0A2W1BHU7   A0A194Q5M1   A0A194QQ84   A0A212FI50   A0A2A4JHM3   A0A2H1WE18   A0A2W1BQ47   A0A0N1IHX2   A0A194QB83   A0A2H1WK34   A0A2H1WQ53   A0A2A4J7G4   A0A212FB89   A0A2H1WJJ9   A0A2H1X046   A0A212EX46   A0A0N1IIG7   A0A0L7L525   A0A2A4JII3   H9JVU3   A0A2W1BV28   A0A194Q5F6   A0A2A4JNL8   A0A3S2TMD3   A0A212F931   A0A2Z5U782   A0A212EZE7   A0A0N1IJR5   A0A2A4J9N1   A0A2A4JKE4   A0A194Q5D6   A0A2M3Z428   A0A2M4A7E4   A0A2M3Z412   A0A2M4A739   A0A2M4A741   A0A2M3ZH26   A0A2W1BTH5   A0A212F0M2   A0A212F0G4   A0A2H1WM77   A0A2M4CQF1   W5JMX1   A0A0L7L9U3   A0A2M4CQC1   A0A1Q3FRY2   A0A1Q3FRU2   A0A0A9X9R8   A0A2M4BLL7   A0A2M4BLK9   A0A146L3L7   H9JFD3   A0A0N0PEG1   A0A182F539   B0WPL1   A0A194QBF3   A0A182P8A2   A0A182JZA6   A0A182SEK5   A0A182XNP0   A0A1S4GZI9   Q7PWP0   A0A182JME0   A0A336LM27   A0A182NGP0   A0A182QRF9   A0A182LMV4   A0A182VUC8   A0A182I799   A0A182UZ66   A0A182UH29   A0A182TXA5   A0A182MPL4   A0A182RSI8   H9JVT8   A0A154PHJ7   A0A084W7N7   A0A182YRN8   A0A0P6IW52   A0A182GCW7   H9J4P6   A0A1A9W0R8   A0A182IRD4   A0A182QXE9   A0A2J7R8M9  

PDB

5EQI     E-value=0.000236271,     Score=102

KEGG

101743250    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021   GO:0022857   GO:0008643   GO:0005351   GO:0005887   GO:0005215   GO:0007631   GO:0016499   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824   GO:0055085  

Length:

215

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

104.23028

Exp number, first 60 AAs:

36.86291

Total prob of N-in:

0.01311

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  37

inside

38  -  45

TMhelix

46  -  65

outside

66  -  69

TMhelix

70  -  92

inside

93  -  98

TMhelix

99  -  121

outside

122  -  124

TMhelix

125  -  147

inside

148  -  215

 

 

Pi

162.147947

Theta

130.054789

Tajima's D

0.435516

CLR

0.087422

CSRT

0.488175591220439

Interpretation

Uncertain