Gene

KWMTBOMO11854

Pre Gene Modal

BGIBMGA004424

Annotation

neuropeptide_receptor_A16_[Bombyx_mori]

Location

Bomo_Chr20(-):2038676-2093123      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.83

CDS

ATGGCCGTGTCATTTGTGAATAAATTATTTTTATTTATCTTTGTGCTAAACAAAGAAAATATATTAGCAGACGATGATGTCACAACCAAACAATTGAATTTGTACATAGCTGACAAACAAGAATCTTTTGAAATGACAACTGTAGAAGATGATCTGAATGTACCAATAAAAATGAAAGCCAACAAAATCATAAGCGAATATGATGATAGATTTAAAACAGATACGAACTCTAGTGAATTTGAGGAAGCAGAGAATGAAACCTGCGTTGGAGATCCACAATACTGCAACATGACAAAGGAGGAGTATGTCAAAATGATACAAGAATATATTTACCCAAACCCGTACGAGTGGATATTGATAGCTACACACACGTTTGTGTTCATAACCGGATTATTTGGGAACGCGCTGGTGTGCGTCGCGGTTTACAGGAATCACTCAATGCGGACTGTTACGAATTATTTCATTGTCAACCTAGCTGTGGCTGATTTCATGGTGATATTGTTTTGTCTGCCAGCGACGGTGCTGTGGGACGTGACTGAGACTTGGTTCCTTGGGGAAGGGCTTTGTAAAGTCCTGCCCTATTTTCAGTCAGTGTCAGTGACGGTGTCAGTTCTGACGCTGACTTTCATCTCTGTGGACCGCTGGTACGCTATCTGCTTCCCGCTGAAGTTCAAGTCGACCACGGGCCGCGCCAAGACCGCCATACTGATTATATGGCTCGTCTCTTTGTGCTTCAATATACCGGAGCTAGTGGTGCTGAAGCTGGTCCGATTCGTTCCTCTGCGCTTCGAGCTGCCGTACTTGCTGCAATGCTACGGGACCTGGTCTCCGAGCAGCGAACTCGTTTGGCACATCCTCAAAGTCCTTTTGATATATACACTACCCCTCGTGCTCATGGCCGTCGCGTATCATCAGATAGCGAGGGTGCTTTGGAGCTCCAACGGAATTCCCGGACAGGCCGACACAAAGAAACTGGCCACTGCAGAACTGAAACACGGCTATAAGATTCTATTTCGATTATACAGGGTGTTCCACAAACATTATATCAAGCCAAAAGCTGTAAATAGTGTTCTGTTAGAATAA

Protein

MAVSFVNKLFLFIFVLNKENILADDDVTTKQLNLYIADKQESFEMTTVEDDLNVPIKMKANKIISEYDDRFKTDTNSSEFEEAENETCVGDPQYCNMTKEEYVKMIQEYIYPNPYEWILIATHTFVFITGLFGNALVCVAVYRNHSMRTVTNYFIVNLAVADFMVILFCLPATVLWDVTETWFLGEGLCKVLPYFQSVSVTVSVLTLTFISVDRWYAICFPLKFKSTTGRAKTAILIIWLVSLCFNIPELVVLKLVRFVPLRFELPYLLQCYGTWSPSSELVWHILKVLLIYTLPLVLMAVAYHQIARVLWSSNGIPGQADTKKLATAELKHGYKILFRLYRVFHKHYIKPKAVNSVLLE

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXM9   A0A0S1YD80   A0A345ANM7   A0A0E3EKU4   F1CZQ1   A0A0N1PJF5   + More
A0A212FAI2   A0A0N0PF28   A0A0S1YD65   B3XXL7   A0A2A4J7H0   A0A1B6C133   A0A1B6KTL7   I6NNS5   A0A336M9M0   A0A1B6JDZ3   U3U4E1   A0A2S2PRZ9   A0A182Q9T1   A0A2C9GPU2   A0A1J1HTG2   G3JWZ1   A0A310SW43   A0A087ZYQ8   K7IWF9   A0A2U9PG22   A0A151X4S1   A0A158NR92   A0A0C9R4T1   A0A195FJP6   A0A151ITZ3   A0A1Y1MF02   A0A0P6B7K0   A0A0A9WR33   A0A0A9WMC0   A0A0P5W420   A0A026W5R0   T1IYS5   A0A1S3D076   A0A2C9JHH0   W5LZB7   A0A3L8DIJ3   A0A0K0PVS5  

Pubmed

18725956    21699978    26354079    22118469    25814925    23932938    + More
21839791    20075255    21347285    28004739    25401762    26823975    24508170    15562597    30249741    26190115   

EMBL

AB330437    BAG68415.1    KT031014    ALM88312.1    MF770987    AXF38049.1    + More
KF881015    AIT70966.1    HQ634154    ADX66344.1    KQ459718    KPJ20251.1    AGBW02009467    OWR50755.1    LADI01012895    KPJ20751.1    KT031002    ALM88300.1    AB330425    BAG68403.1    NWSH01002529    PCG68067.1    GEDC01030319    JAS06979.1    GEBQ01025181    JAT14796.1    JN543509    AEX08666.2    UFQS01000581    UFQT01000581    SSX05122.1    SSX25483.1    GECU01010359    JAS97347.1    AB817299    BAO01066.1    GGMR01019621    MBY32240.1    AXCN02001908    AXCN02001909    APCN01005316    CVRI01000020    CRK91360.1    JN030894    AEN03789.1    KQ759870    OAD62416.1    MG550205    AWT50639.1    KQ982540    KYQ55426.1    ADTU01023826    ADTU01023827    ADTU01023828    GBYB01002980    GBYB01002983    JAG72747.1    JAG72750.1    KQ981522    KYN40586.1    KQ980970    KYN10929.1    GEZM01033168    JAV84382.1    GDIP01020859    JAM82856.1    GBHO01034662    GBHO01034661    GDHC01019905    JAG08942.1    JAG08943.1    JAP98723.1    GBHO01034664    GBHO01034660    GDHC01012203    GDHC01004088    JAG08940.1    JAG08944.1    JAQ06426.1    JAQ14541.1    GDIP01091981    JAM11734.1    KK107390    EZA51412.1    JH431696    AHAT01009366    AHAT01009367    QOIP01000007    RLU20260.1    KP294022    AKQ63076.1   

Proteomes

UP000053240    UP000007151    UP000053268    UP000218220    UP000075886    UP000075840    + More
UP000183832    UP000005203    UP000002358    UP000075809    UP000005205    UP000078541    UP000078492    UP000053097    UP000079169    UP000076420    UP000018468    UP000279307   

PRIDE

B3XXM9    B3XXL7   

Pfam

PF00001   7tm_1

Interpro

IPR000611   NPY_rcpt        + More
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000204   Orexin_rcpt       

CDD

cd15208  7tmA_OXR

ProteinModelPortal

B3XXM9   A0A0S1YD80   A0A345ANM7   A0A0E3EKU4   F1CZQ1   A0A0N1PJF5   + More
A0A212FAI2   A0A0N0PF28   A0A0S1YD65   B3XXL7   A0A2A4J7H0   A0A1B6C133   A0A1B6KTL7   I6NNS5   A0A336M9M0   A0A1B6JDZ3   U3U4E1   A0A2S2PRZ9   A0A182Q9T1   A0A2C9GPU2   A0A1J1HTG2   G3JWZ1   A0A310SW43   A0A087ZYQ8   K7IWF9   A0A2U9PG22   A0A151X4S1   A0A158NR92   A0A0C9R4T1   A0A195FJP6   A0A151ITZ3   A0A1Y1MF02   A0A0P6B7K0   A0A0A9WR33   A0A0A9WMC0   A0A0P5W420   A0A026W5R0   T1IYS5   A0A1S3D076   A0A2C9JHH0   W5LZB7   A0A3L8DIJ3   A0A0K0PVS5  

PDB

5WS3     E-value=1.43149e-53,     Score=529

KEGG

100174926    K04239 hypocretin (orexin) receptor 2 | (RefSeq) NGR-A16, BNGR-A16; neuropeptide receptor A16

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0016499   GO:0004983   GO:0016021   GO:0007631   GO:0007218   GO:0005887   GO:0007186   GO:0004930   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Length:

360

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

111.74348

Exp number, first 60 AAs:

0.11631

Total prob of N-in:

0.00644

outside

1  -  118

TMhelix

119  -  141

inside

142  -  153

TMhelix

154  -  176

outside

177  -  190

TMhelix

191  -  213

inside

214  -  233

TMhelix

234  -  253

outside

254  -  280

TMhelix

281  -  303

inside

304  -  360

 

 

Pi

214.026644

Theta

169.544725

Tajima's D

1.493168

CLR

0.270693

CSRT

0.787060646967652

Interpretation

Uncertain