Gene

KWMTBOMO11852

Annotation

neuropeptide_receptor_A16_[Bombyx_mori]

Location

Bomo_Chr20(-):2022403-2029203      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.812 PlasmaMembrane   Reliability : 2.218

CDS

ATGCCACAACTCCGTTCTAGAAGGAAGGCAGCTAAAATGTTGGTGTCAGTTGTGATAATGTTCGCCGTATGCTATTTCCCGGTTCACCTGCTATCTGTGATGCGCTACACAATCGATATGGGACAAACGGAATTCATAACCATTTGGGCGCTTGTCTCGCACGTCATGTGCTACGCGAATTCCGCCATAAATCCATTGATCTACAATCTCATGAGTGATAAATTTCGTCGCGAATTCCGCAGAGCGTTCTGCTGCTCTACCAGTTCGGGACGGCAGGATTTCACGTCCATGTCCCGTGTCACCACGAAGAAGGACTCGTCCATAATGGCATCCTTCAAGCCAGGACATACCAGCACGACATTCGTACATAACAATAAAAACGGACATATGACTTAA

Protein

MPQLRSRRKAAKMLVSVVIMFAVCYFPVHLLSVMRYTIDMGQTEFITIWALVSHVMCYANSAINPLIYNLMSDKFRREFRRAFCCSTSSGRQDFTSMSRVTTKKDSSIMASFKPGHTSTTFVHNNKNGHMT

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXM9   A0A2W1BY68   F1CZQ1   A0A0E3EKU4   A0A345ANM7   A0A0S1YD80   + More
S4P9K7   A0A2W1BXU9   A0A1B0CBY5   B3XXL7   A0A0S1YD65   A0A139WE88   A0A0N0PF28   A0A0T6B5J7   A0A0N1IB59   A0A139WEA0   A0A0A9WMC0   A0A0A9WR33   A0A1Y1MF02   A0A310SW43   A0A1J1HTG2   T1IYS5   A0A2S2PYX5   J9KQF9   A0A2A4JVI5   A0A1B6C133   A0A1W4XMD0   A0A2H8TGA7   A0A2H8TJK2   A0A2S2PRZ9   A0A067RIJ8   A0A0T6B5T4  

Pubmed

18725956    28756777    21699978    23622113    18362917    19820115    + More
26354079    25401762    26823975    28004739    24845553   

EMBL

AB330437    BAG68415.1    KZ149924    PZC77636.1    HQ634154    ADX66344.1    + More
KF881015    AIT70966.1    MF770987    AXF38049.1    KT031014    ALM88312.1    GAIX01005431    JAA87129.1    PZC77640.1    AJWK01005972    AJWK01005973    AJWK01005974    AJWK01005975    AB330425    BAG68403.1    KT031002    ALM88300.1    KQ971354    KYB26244.1    LADI01012895    KPJ20751.1    LJIG01009703    KRT82550.1    KQ459718    KPJ20254.1    KYB26242.1    GBHO01034664    GBHO01034660    GDHC01012203    GDHC01004088    JAG08940.1    JAG08944.1    JAQ06426.1    JAQ14541.1    GBHO01034662    GBHO01034661    GDHC01019905    JAG08942.1    JAG08943.1    JAP98723.1    GEZM01033168    JAV84382.1    KQ759870    OAD62416.1    CVRI01000020    CRK91360.1    JH431696    GGMS01001523    MBY70726.1    ABLF02018210    NWSH01000599    PCG75420.1    GEDC01030319    JAS06979.1    GFXV01001309    MBW13114.1    GFXV01002414    MBW14219.1    GGMR01019621    MBY32240.1    KK852611    KDR20270.1    KRT82549.1   

Proteomes

UP000092461    UP000007266    UP000053268    UP000053240    UP000183832    UP000007819    + More
UP000218220    UP000192223    UP000027135   

PRIDE

B3XXM9    B3XXL7   

Pfam

PF00001   7tm_1

Interpro

IPR000611   NPY_rcpt        + More
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000204   Orexin_rcpt       

CDD

cd15208  7tmA_OXR

ProteinModelPortal

B3XXM9   A0A2W1BY68   F1CZQ1   A0A0E3EKU4   A0A345ANM7   A0A0S1YD80   + More
S4P9K7   A0A2W1BXU9   A0A1B0CBY5   B3XXL7   A0A0S1YD65   A0A139WE88   A0A0N0PF28   A0A0T6B5J7   A0A0N1IB59   A0A139WEA0   A0A0A9WMC0   A0A0A9WR33   A0A1Y1MF02   A0A310SW43   A0A1J1HTG2   T1IYS5   A0A2S2PYX5   J9KQF9   A0A2A4JVI5   A0A1B6C133   A0A1W4XMD0   A0A2H8TGA7   A0A2H8TJK2   A0A2S2PRZ9   A0A067RIJ8   A0A0T6B5T4  

PDB

5WS3     E-value=1.06542e-18,     Score=222

KEGG

100174926    K04239 hypocretin (orexin) receptor 2 | (RefSeq) NGR-A16, BNGR-A16; neuropeptide receptor A16

GO

GO:0016499   GO:0004983   GO:0016021   GO:0007631   GO:0004930   GO:0007218   GO:0007186   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Length:

131

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

43.89328

Exp number, first 60 AAs:

36.00854

Total prob of N-in:

0.99725

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  44

TMhelix

45  -  67

inside

68  -  131

 

 

Pi

253.738346

Theta

180.163874

Tajima's D

1.405524

CLR

0.005692

CSRT

0.765811709414529

Interpretation

Uncertain