Gene

KWMTBOMO11849

Pre Gene Modal

BGIBMGA004427

Annotation

PREDICTED:_probable_metabolite_transport_protein_CsbC_[Amyelois_transitella]

Location

Bomo_Chr20(-):1952765-1955373      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.84

CDS

ATGATCCTGTGTGGCAGTATAGTGTTTCTGAACCAAAGCAAGGCTCTGATCCAGCTGAAAGGGTACGATGATCCGCAAAGCGTATTGGTGACCAGCTCCTTACTCGCCGGAAGTCTTCTGACTTTAATCTGCGTCACAATTCTAGATATGAAATATCTTCTGAGTCTTGGGTACGCGATAATGGCATTAGCGTCTGGAGTGTTGGCAGTTTACAACCAAGTCGACCTAGAAGTGACGTCATATCAATGGCTGGCAATAGCTTCTCTCGCGACTTTGTTATTTGGTTACGGAATGTCTTGGGTATTACCTATTATTGTTCTAACGCAGACTCTTAACTTTGAGATAAAAGCGACGTTGCTAGGAATTCTTTTCGCTTATTTTCAACTAATCAAACTAGCGCATGCGTACACCTTTCCATACATCGAAGAGTACGTCGGTGCCTACACCCTGTTCTATATATTTGCAAGCGTCAACTTGTATGGTGCTGTGTATAATTTGTTCGTTAGTCCGAACGTGAATGGTTTGAATGTTAGACAAATCGAGAAGCAAATTAAAAGGATACCTTTGCCGGCGTGA

Protein

MILCGSIVFLNQSKALIQLKGYDDPQSVLVTSSLLAGSLLTLICVTILDMKYLLSLGYAIMALASGVLAVYNQVDLEVTSYQWLAIASLATLLFGYGMSWVLPIIVLTQTLNFEIKATLLGILFAYFQLIKLAHAYTFPYIEEYVGAYTLFYIFASVNLYGAVYNLFVSPNVNGLNVRQIEKQIKRIPLPA

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4I7   A0A2A4K2Q1   A0A2A4K2C2   A0A2W1BWR3   A0A2H1WCX6   A0A0N0PFD6   + More
A0A0N1PK00   A0A0N1IJR5   A0A2M3Z6L4   A0A2M4ABT6   A0A194QBF3   W5J503   A0A3S2NZV3   A0A2M4BTJ5   A0A194Q5D6   A0A182F1A5   A0A182XZR5   A0A2A4J9N1   A0A3R7QZ39   A0A1Y0AWR4   A0A182PJS2   A0A2P6KZK9   A0A1Y1LQ19   A0A182RJE1   A0A182Q793   A0A182LZC2   A0A182W7L6   A0A182JVW4   A0A084W7N4   A0A1J5X725   A0A182JLH4   A0A232F7N7   A0A182NTG2   A0A212F0M2   A0A3Q0MH72   B0WPK6   H9JW16   A0A0K8SMF9   A0A224XJ44   A0A0K8SMN3   A0A1B6KWE6   A0A182V9M3   A0A182UBP4   E9IVK0   A0A182L2P2   A0A2N0Z5D2   A0A1S4GW53   A0A0K8SN44   A0A1B6FCQ0   B3SA04   A0A2M8SYG8   G4NR32   A0A2S9WHF3   A0A0M0KU80   A0A369RYJ1   A0A0K6JN55   A0A136GF33   H9JVT8   A0A2A4K8F1   A0A2A4K8N6   E9J4B0   A0A1W4WMB8   A0A195CTY6   A0A1Q3F5U7   A0A1Q3F5A2   A0A1B6G9Z8   E9IVK2   A0A182GV32   A0A384HA48   A0A1B6HRE5   A0A139WP91   A0A1J1IXX5   Q8SYV8   Q8IPZ9   A0A0J7L1I9   A0A2Z5AEY6  

Pubmed

19121390    28756777    26354079    20920257    23761445    25244985    + More
28341416    28004739    24438588    28648823    22118469    21282665    20966253    12656168    12364791    18719581    22493193    30042472    26483478    18362917    19820115    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01021813    NWSH01000245    PCG78053.1    PCG78054.1    KZ149924    PZC77637.1    + More
ODYU01007809    SOQ50887.1    LADI01012895    KPJ20752.1    KQ459718    KPJ20253.1    KQ459838    KPJ19754.1    GGFM01003394    MBW24145.1    GGFK01004932    MBW38253.1    KQ459460    KPJ00761.1    ADMH02002200    ETN57864.1    RSAL01000077    RVE48769.1    GGFJ01007254    MBW56395.1    KPJ00762.1    NWSH01002244    PCG68837.1    QCYY01000579    ROT84235.1    KY921833    ART29422.1    MWRG01003273    PRD31766.1    GEZM01049927    JAV75752.1    AXCN02000704    AXCM01001188    ATLV01021267    ATLV01021268    KE525315    KFB46228.1    MOEO01000007    OIR60665.1    NNAY01000793    OXU26469.1    AGBW02011050    OWR47308.1    DS232026    EDS32407.1    BABH01036553    GBRD01011333    JAG54491.1    GFTR01006588    JAW09838.1    GBRD01011331    JAG54493.1    GEBQ01024204    GEBQ01000261    JAT15773.1    JAT39716.1    GL766258    EFZ15414.1    PISE01000011    PKG24735.1    AAAB01008964    GBRD01011151    JAG54673.1    GECZ01021792    JAS47977.1    DS985260    EDV20428.1    PHIE01000004    PJH92574.1    CP002905    AEP85501.1    PVXB01000006    PRP62904.1    LILA01000009    KOO42385.1    NOWV01000131    RDD39529.1    CYHI01000613    CUB16803.1    LSMU01000002    KXJ39199.1    BABH01040665    BABH01040666    BABH01040667    NWSH01000052    PCG80174.1    PCG80173.1    GL768090    EFZ12343.1    KQ977279    KYN04151.1    GFDL01012162    JAV22883.1    GFDL01012362    JAV22683.1    GECZ01010512    JAS59257.1    EFZ15397.1    JXUM01018776    KQ560522    KXJ82002.1    PVQO01000006    PRR96106.1    GECU01030485    JAS77221.1    KQ971307    KYB29810.1    CVRI01000063    CRL04570.1    AY071288    AAL48910.1    AE014134    BT050438    AAN10389.1    ACJ13145.1    LBMM01001313    KMQ96531.1    CP022198    AXA67850.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000000673    UP000283053    + More
UP000069272    UP000076408    UP000283509    UP000075885    UP000075900    UP000075886    UP000075883    UP000075920    UP000075881    UP000030765    UP000181920    UP000075880    UP000215335    UP000075884    UP000007151    UP000002320    UP000075903    UP000075902    UP000075882    UP000233375    UP000009022    UP000229353    UP000002651    UP000238133    UP000036825    UP000253843    UP000182087    UP000070493    UP000192223    UP000078542    UP000069940    UP000249989    UP000239115    UP000007266    UP000183832    UP000000803    UP000036403    UP000250579   

PRIDE

H9J4I7    H9JW16    H9JVT8    Q8SYV8    Q8IPZ9   

Pfam

PF00083   Sugar_tr        + More
PF01545   Cation_efflux

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       
IPR036837   Cation_efflux_CTD_sf       
IPR002524   Cation_efflux       
IPR027469   Cation_efflux_TMD_sf       

SUPFAM

SSF103473   SSF103473        + More
SSF160240   SSF160240       
SSF161111   SSF161111       

Gene 3D

1.20.1510.10    

CDD

cd06174  MFS

ProteinModelPortal

H9J4I7   A0A2A4K2Q1   A0A2A4K2C2   A0A2W1BWR3   A0A2H1WCX6   A0A0N0PFD6   + More
A0A0N1PK00   A0A0N1IJR5   A0A2M3Z6L4   A0A2M4ABT6   A0A194QBF3   W5J503   A0A3S2NZV3   A0A2M4BTJ5   A0A194Q5D6   A0A182F1A5   A0A182XZR5   A0A2A4J9N1   A0A3R7QZ39   A0A1Y0AWR4   A0A182PJS2   A0A2P6KZK9   A0A1Y1LQ19   A0A182RJE1   A0A182Q793   A0A182LZC2   A0A182W7L6   A0A182JVW4   A0A084W7N4   A0A1J5X725   A0A182JLH4   A0A232F7N7   A0A182NTG2   A0A212F0M2   A0A3Q0MH72   B0WPK6   H9JW16   A0A0K8SMF9   A0A224XJ44   A0A0K8SMN3   A0A1B6KWE6   A0A182V9M3   A0A182UBP4   E9IVK0   A0A182L2P2   A0A2N0Z5D2   A0A1S4GW53   A0A0K8SN44   A0A1B6FCQ0   B3SA04   A0A2M8SYG8   G4NR32   A0A2S9WHF3   A0A0M0KU80   A0A369RYJ1   A0A0K6JN55   A0A136GF33   H9JVT8   A0A2A4K8F1   A0A2A4K8N6   E9J4B0   A0A1W4WMB8   A0A195CTY6   A0A1Q3F5U7   A0A1Q3F5A2   A0A1B6G9Z8   E9IVK2   A0A182GV32   A0A384HA48   A0A1B6HRE5   A0A139WP91   A0A1J1IXX5   Q8SYV8   Q8IPZ9   A0A0J7L1I9   A0A2Z5AEY6  

KEGG

101743101    no KO assigned | (RefSeq) inositol transporter 1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005887   GO:0005351   GO:0007631   GO:0016499   GO:0004930   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824   GO:0055085  

Length:

191

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

108.36319

Exp number, first 60 AAs:

28.80636

Total prob of N-in:

0.01481

POSSIBLE N-term signal

sequence

outside

1  -  27

TMhelix

28  -  47

inside

48  -  51

TMhelix

52  -  74

outside

75  -  83

TMhelix

84  -  106

inside

107  -  118

TMhelix

119  -  141

outside

142  -  145

TMhelix

146  -  168

inside

169  -  191

 

 

Pi

185.049841

Theta

132.29513

Tajima's D

1.477683

CLR

0

CSRT

0.781410929453527

Interpretation

Uncertain