Silkworm Genome Informatics Database

Gene

KWMTBOMO11841

Pre Gene Modal

BGIBMGA004431

Annotation

PREDICTED:_zinc_finger_protein_808-like_[Bombyx_mori]

Location

Bomo_Chr20(-):1627337-1638310 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.922

CDS

ATGTCTGATTTAAAAGTGTGCAGGATATGTCTTAATATAGACGTAAAAATGTACGAATGGGAAAAACATCAGTTAAAAGACTATTACGAACAGATAATGTCAACAAAGCTGAAGAAAAATGATACTTTGCCTAGATTCTTCTGTTATGAATGTGCTGCTTTGTTACATAAATTTTACAAATTTAAAAATAAATGTGAAAATGGTCTTAATGAACTCAAACGGCTGTTGGGAAGTGGTGGAGTAACTCTACAGAAAGTGGCTAAAATTGATAGAGCAACTCAAAATCTAGACACAACAATAGGTGTAACAATGATAACAAACAGAGTCAAAACATACTTTGAAAGGCATCGCAGAATTCTAAAACGTAAATCAAGAAATCCCTCAATCACTAGTATCAGTTTAGAAATGGTAAACATTCCTGATGACGATCAAGCAGAGTCCATTAAAAATGATGATGATCATAATGAAATTAATGAACAAAGTGATATAGTCACCTGTGAACAAGAATCTGCTCATAAAATGGACATTTTAATTGATGATGATGATAAACTGGAAAATATCACAGAAGACTGTACAGCCTCTGATAATAATGTAGAAATCAATACAACCGATATGCAATTTGAGGAAGTAATAAAAGAAATGAAGTTACCGAAATTATATAAGAAAAGTAAAAGTAAAAAGAAACGGAAAAAAATAGAGTTGAAAGCTATAGAAAGAAAGAAAAGAGAACTGAATGAAAAAAACTGGCAGAGATTTTATTTGACTGAAGAAGACGCTGTAAACGAATTTCAGTCACGAGCCCAAGACCCAAAGTACATCAGCGCTGTTTACAAGTGTACATTTTGTCTGAAAGGGTTCTCTAAAGAGGACATGATGAAGAGGCACAATAAATTAAGGCACAGTGAGTCAAACGGCTCGATCGAGTGTCGCTTCTGTCGGATCCGCTTCAAGTGGAAGTCGCTCCTGAGAAGACACATTCGTGAACATTACAATAAATACAAATGCTTGCGATGCGACCTCATATTTTCCAGAGAGACGTCAGCCCAGCATCACGATCAGTTTCACAACGGTGTGACGAGAACGTGTGAATATTGCAACGAGACATTTAAACATCTGTCGACGTACTATACGCACCTCCGGAAGCACAGGAGCAAACATCTGTGCGCTCTGTGCGGAGAGTCCTTCGTCAGCGAATTTGGACTCTACATGCACAGGAGAGTGAAGCACGTCATGGACGCCGAAAGACAAGACGATGATTCGATGGAGGAAACGACATACTGTGAGAGGTGCGATATCAAATTTGAATCGAGGCGAGCTTACGAGGAGCATCTGATACATTCCGCCATGCATTCTATCTCAGGAGAATCACCCGCGCCCATGAACTTAAAGGGAGGGACCGTTGTAAGAAGAGCTCCAAGAAAACAAACACCCTGTACCATTTGCAACAAGAACTTCTCGACCCTGGTGGCGTACATGAAGCACCACCAGGCGGAGCACCCCGGGCAGCCCGCCCCGGCCGCCGCGCGAGCCCCGCCCTCCGCCGACCCGCACCAGCGCCACATCTGCGAGATCTGCGGGGCTCTGCTGGCGCCGAACAGCATGTACAGTCACGTGAACACGCACACGCGCGAGAAGCAGTACACGTGCGCGACGTGCGGCATGCAGTTCAACGCCAAGGGAACCCTCCAGAGGCACTACCTGACGCACACGGGCGAGAAGCCGGTGGAGTGCTCGCTGTGCGATAAGCGGTTCACTCAGGTGGCCAGCATGAAGCTGCACTACAGGACCATACACTTGAAACAGCCCTATCCGAAAAGGAATCGAAAGAAGAAATCCGAAGACTCCGATGAAACGGCTCTCATAGCGGAATATTATCAGAACAAGGAAGCGGCTGACGACTTGCCTTTAGAGAGATGGAGGACGATGCGCTTGTGA

Protein

MSDLKVCRICLNIDVKMYEWEKHQLKDYYEQIMSTKLKKNDTLPRFFCYECAALLHKFYKFKNKCENGLNELKRLLGSGGVTLQKVAKIDRATQNLDTTIGVTMITNRVKTYFERHRRILKRKSRNPSITSISLEMVNIPDDDQAESIKNDDDHNEINEQSDIVTCEQESAHKMDILIDDDDKLENITEDCTASDNNVEINTTDMQFEEVIKEMKLPKLYKKSKSKKKRKKIELKAIERKKRELNEKNWQRFYLTEEDAVNEFQSRAQDPKYISAVYKCTFCLKGFSKEDMMKRHNKLRHSESNGSIECRFCRIRFKWKSLLRRHIREHYNKYKCLRCDLIFSRETSAQHHDQFHNGVTRTCEYCNETFKHLSTYYTHLRKHRSKHLCALCGESFVSEFGLYMHRRVKHVMDAERQDDDSMEETTYCERCDIKFESRRAYEEHLIHSAMHSISGESPAPMNLKGGTVVRRAPRKQTPCTICNKNFSTLVAYMKHHQAEHPGQPAPAAARAPPSADPHQRHICEICGALLAPNSMYSHVNTHTREKQYTCATCGMQFNAKGTLQRHYLTHTGEKPVECSLCDKRFTQVASMKLHYRTIHLKQPYPKRNRKKKSEDSDETALIAEYYQNKEAADDLPLERWRTMRL

Uniprot

A0A2H1V264 A0A2W1BQ38 A0A2A4K4E2 H9J4J0 A0A2A4K524 A0A2H1WS93 + More

Pubmed

28756777 19121390

EMBL

ODYU01000342 SOQ34930.1 KZ149937 PZC77098.1 NWSH01000141 PCG79125.1 + More
BABH01021778 PCG79126.1 ODYU01010673 SOQ55945.1

Proteomes

UP000218220 UP000005204

PRIDE

H9J4J0

Pfam

PF00096 zf-C2H2 + More
PF07776 zf-AD

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR012934   Znf_AD

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A2H1V264 A0A2W1BQ38 A0A2A4K4E2 H9J4J0 A0A2A4K524 A0A2H1WS93 + More

PDB

5WJQ E-value=1.74168e-15, Score=204

KEGG

101742046 no KO assigned | (RefSeq) zinc finger protein 808-like

GO

GO:0008270 GO:0003676 GO:0005634 GO:0046872 GO:0016020 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

Length:

644

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00534

Exp number, first 60 AAs:

0.00355

Total prob of N-in:

0.00192

outside

1 - 644

Pi

198.589065

Theta

161.00795

Tajima's D

0.740159

CLR

0.273982

CSRT

0.587920603969802

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics