Silkworm Genome Informatics Database

Gene

KWMTBOMO11839

Pre Gene Modal

BGIBMGA004432

Annotation

PREDICTED:_zinc_finger_protein_808-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr20(-):1609345-1614450 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.689

CDS

ATGAAGCTGCACTACAAGACCTTTCATCTCAAGCAGCCATATCCGAAAAGGAACAGAAGAAAGAATAAGGAGGAACACGCGACAGAGAATATTGAAGAGTCGTCCAACGACTTAGACTCTGACAGTCTCCCCGAGCCGGGAGAGGTGCATCCGCCCGGGATCCAAACTGTGCACGGCGCGCCGCCGGTCCACGACGAGCCCATGGACTACATGCGACTATAG

Protein

MKLHYKTFHLKQPYPKRNRRKNKEEHATENIEESSNDLDSDSLPEPGEVHPPGIQTVHGAPPVHDEPMDYMRL

Uniprot

H9J4J2 A0A2A4K4E2 A0A2W1BQ38

Pubmed

19121390 28756777

EMBL

BABH01021774 BABH01021775 NWSH01000141 PCG79125.1 KZ149937 PZC77098.1 + More

Proteomes

UP000005204 UP000218220

PRIDE

H9J4J2

Pfam

PF07776 zf-AD + More
PF00096 zf-C2H2

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9J4J2 A0A2A4K4E2 A0A2W1BQ38

KEGG

101741901 no KO assigned | (RefSeq) oocyte zinc finger protein XlCOF6-like

GO

GO:0005634 GO:0008270 GO:0003676

Length:

73

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.36735

outside

1 - 73

Pi

303.601715

Theta

155.493452

Tajima's D

2.633787

CLR

0.000048

CSRT

0.956402179891005

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics