Silkworm Genome Informatics Database

Gene

KWMTBOMO11836

Pre Gene Modal

BGIBMGA004266

Annotation

PREDICTED:_uncharacterized_protein_LOC101738256_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr20(-):1538410-1540680 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.506

CDS

ATGGTCGGAAACCTCCTGCACTGGATTCAGGGATTATACCAGCAAAGAACTAGGAAAGCTCGTCAGTACTTCGGAGGAAGACCTGAGAAGCCAAGACCTTTTGAACCAGCACCATCTTACTTACCCCCTGTGACAGGATATCCAGCTGCAGGATCACGTCCCACTCCTGTCTACAATGAGGGCCCATCATCGACAGTTCCACAAAACCCACCAAGCCAACCTGAAACCACGTATCAACCGGAGCAACCCTATCCTCCAATCCAACCTACTTACTTACCCAGCCGCCCTGCTCAACCTAGCTACCAGCCCAGCCAGCCGACACAACCTTCCTATCAGCCAAGTTCGCCTTCAGTTCCTACCTACCAGCCTAGTCAACCGACTTACGAGCCTTCGCAACCTAGCGACCAACCCAGTCAGCCGTCCCAACCTTCTTATCAACCTAGTCAACCAACCACTTTCCAGACAAGCCAACCCACTGTTCCTGAAACCACTCTTCCTGCTTTCGTTTCCGACAACGGTGGCAGCAGCTCTGGCGAATCCTCGCAAACGCAACTACCCACCCTGGATGATGATGACGATCGCCACCCTCCTCACATTCACGCTATTACAGTTGACTGTGGCAAGGAAATGATGACAATCAACGTCGAATTCAACAAGCCGTACAATGGCATCATCTATTCTCAGGATCACTATAACGAACCTGAGTGCGTTTACGTCAGAGAGAATTCGAACCAAATCAAATACTCGTTCACTGTAAGCCTAAACACTTGTGGCACAAGATTCTTCAGTGACTTCCAAAACGAAGGCCAAGCCTACCTCGAAAACGTACTAGTACTTCAAAACGAACCCGGTATTCAAGAAGTATGGGATCACATCCGCAGAGTCAGATGTTTGTGGGAAGGAAATTTGACCAAGCAATTGGTTTCATCGCTCAGTGTCGGTATGCTGAACCAGATCACGAGCAATTTCAGTGGAGACACAGCCATGGCACGTTTGGACATCCAGACCGGACGTGGACCTTTCGCGCCTGAAGCAAACGGCCTGATCAAGATCGGAGAGACCATGACTTTGGTTGTATCTGTTACCGGAGACCCAGGATTCGACATTCAAGTTAAAGAATGTATCGCCAGAGACGCCGATAGCCGCCAAATGGTACCGTTAACTGACAGCAACGGTTGTATATTAAAACCCAAGCTATTCGGTGCCTTCCAGAAAACTAGAGAAACAGGAAATACTGGGGCATCGATCATTGCGTTCGCATTCTTCAAAGCTTTTAAGTTCCCCGATGAAATGGACCTAATTATCCAATGCGATGTGGAGTTGTGCAAAACTGACTGCGACGTATGCCCTAACCCTGGGAGCATCGAACCGAGGAGAAAGAGGAGGGATATCATCCATGTCGGAAACAGAACTGTGGAGCCTATGACGACGATTAGCAAAGGTTTTAGAGTGGTATTTGCTGAAGACCTCCCAGAGCCTTCTGGAGTATGCATGACGCAGTCCGCTGCTTTGTGGGGCGGAGTGCTGGTACTCCTCGGATCTTTGATGAGCAGTGTCCTCGTTTCGTATTGCTGGCAGAGATCCAGAGGCACCGTGAAGTTTACATAA

Protein

MVGNLLHWIQGLYQQRTRKARQYFGGRPEKPRPFEPAPSYLPPVTGYPAAGSRPTPVYNEGPSSTVPQNPPSQPETTYQPEQPYPPIQPTYLPSRPAQPSYQPSQPTQPSYQPSSPSVPTYQPSQPTYEPSQPSDQPSQPSQPSYQPSQPTTFQTSQPTVPETTLPAFVSDNGGSSSGESSQTQLPTLDDDDDRHPPHIHAITVDCGKEMMTINVEFNKPYNGIIYSQDHYNEPECVYVRENSNQIKYSFTVSLNTCGTRFFSDFQNEGQAYLENVLVLQNEPGIQEVWDHIRRVRCLWEGNLTKQLVSSLSVGMLNQITSNFSGDTAMARLDIQTGRGPFAPEANGLIKIGETMTLVVSVTGDPGFDIQVKECIARDADSRQMVPLTDSNGCILKPKLFGAFQKTRETGNTGASIIAFAFFKAFKFPDEMDLIIQCDVELCKTDCDVCPNPGSIEPRRKRRDIIHVGNRTVEPMTTISKGFRVVFAEDLPEPSGVCMTQSAALWGGVLVLLGSLMSSVLVSYCWQRSRGTVKFT

Uniprot

H9J427 A0A0N1IQM6 A0A0N1IKE0

Pubmed

19121390 26354079

EMBL

BABH01041293 LADJ01037929 KPJ21327.1 LADI01012895 KPJ20746.1

Proteomes

UP000005204 UP000053240 UP000053268

PRIDE

H9J427

Pfam

PF00100 Zona_pellucida

Interpro

IPR001507 ZP_dom

ProteinModelPortal

H9J427 A0A0N1IQM6 A0A0N1IKE0

KEGG

101738256 no KO assigned | (RefSeq) uncharacterized LOC101738256

GO

GO:0003899 GO:0016021

Length:

535

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.40781

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00052

outside

1 - 502

TMhelix

503 - 525

inside

526 - 535

Pi

296.89234

Theta

212.017177

Tajima's D

1.227336

CLR

0.119852

CSRT

0.723213839308035

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics