Silkworm Genome Informatics Database

Gene

KWMTBOMO11835

Pre Gene Modal

BGIBMGA014054

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1_[Bombyx_mori]

Location

Bomo_Chr20(-):1511133-1529020 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.868

CDS

ATGGAAAGATTTAACCTTATTGCAATTGAGGATTTGCCCGCTGGGGAACCGATAGAGCAGGCATTGACGGAGCGAAGTAAGCGTTCATGGAACCCCCGAAATTATGAACCTGACGGAGAGGACATTCCAGTAATTTTGTCTTCACCTGCGATTCCGCCATCACCGGCAATGTACGTTGAATGTGGCGGCAGTGGTACGAGCACGCCATCTTCTAGATATAATATACAGATTTCTGTACATGGCAGCCGTAGTCCTTCGCCGTCACATAAACGTGTGCGTCGATCGCTTTGCCCAGACCAAGAACATGATACTACGAACAGAGATTCTATTTCATCGCTACGTCGACCGCTACGAGACTCTGAAATTTGCTACTTGTTGCACTATGGAAGTGACGACGATGACAGCGATGATGAGAGCCAGAATGATAACGACGAAATCGTTCCCATGATTATCCCCCGGGCAGCTGGAATACTGATGGACACTCCGGACGACGAGGAGATTGAGATTGACACGGCGGCGGCAACTAAACCTCTTGTGACATCTTCCGCGCCTTCCATCATTTCAGCACCTACATCACCAGCGCGTGATACCGGTATGAAGCCTAGTCATTTTTTTGAATTTGACTGGGGAACTTTCCCTGACTCTCCTATACCGCCAACAGAAAGGCGTGAATCTTTTAAGGAACACTCTGGTCCCACTGTTGCTGTAAGTGACCCTTACGAGATTTTTAGACTTATTTGGGACCAGGAGTTCATGGAATTTATTGTGCAGGAAACAAATAGATATGCCCAACAATTAGCTGCTGAAATGTTGGACGGCGGGGAATTACAGGCCTCCAGTAGGATTACAGAATGGAAAGAAACCAATGTAGACGAGTTATTGGTGTTCTTCGGAATATTACTGGCGATGGGAATCGTCATAAAGAACCGGGTTGAAGAGTACTGGAATACGGAACAAAACATCTTCTCCACTCCAGGTTTCAAAGTATATATGTCGCTTAGGAGGTTCCAGTTACTCAGCAGGTGCTTACATTTTAATAATTCCGAGAACTTGAGAAACCTCAACCTGGATCCCTCACAGGCAAAGCTTTTTAAAGTGGAGCCTGTGATTAGCCATTTGAATTCCAAGTTCACGGAATTATATATAATGAAGCAGAACATTGCTTTAGATGAATCGCTGCTGCAGTGGAAAGGTTGGTTGAACATCAACCAATTTATTCCAAACAAAGCTGCAGCAGTGGGCATAAAAACTTACGAAATATGTGAGTCGCAGACGGGGTATTTATGGCGATTTAAAATCCATGCCCATAAGGCTTCGCCTACAGTCTCAGAGGCTGATCCATTCACAGCGAGTACACCGGCGTTGGTTCTTAACCTTATCAAAGGTTTAGAACACAAAGGATACACGTTGTGGATGGATAACTTCTACAATTCCCCAGCACTTGCCCGAAAACTCAAATCGATTGGGTTTGATTGTGTCGGTACGTTGCGGACAAACCGCAAGTATGTCCCGACGGAACTGACCAATCTGAAAAAATCTCAGATGAAGCCCGGGCAAGTAGTAGGCTATACCAGTGGAGATGTCGATTGCATAATATGGAGAGATCAGAACCGCGTAGCGACGATCTCAACGTACCATGGCAATGCCGTCTCCACTAAAAACGGAGTAACAAAACTTATTTTGATACGTGACTACAACATCTGCATGGGTGGCGTGGATAAAAAAGATCAGATGTTGGCTGCATTCCCAATTGAACGCAAGAGGACACAAATTTGGTACAAGAAATTGTTTAAAAGGCCGATGTCTGCGTGGGAGATATCACTACTGGGCAGCTTGCCTAACTTCGGAGCACTGTTGGCTAGTCCCTTCTGTGGACTCGCCTTCAACATTTTAGGAAGAAAATACGCTACGATATTCTTCGGTCTACCTTACGTGATCACATGGACAATAATATCTCTTACGGATAATGTGATCCTAGTACTTGTGGCCATGTCGATCGCGGGTGTGGGCGTTGCGGGGCAAAACGTTGCAATAATTTACGTGTCAGAAATCGCTCATGATTCAATCCGAGGTGGTCTCACGGCATTCTCATCATCGGGGTATATCATAGGGCTTTTGACGTCATACATCTTGGGAGGAAAACTGACGTATCAACAGGTTGTTTATACGCATTTGGGGTTCTCAGTAATGACGATGCTGTTGTTGACCTTACTCCGCGAGAGTCCTGTGTTCCTGGTAATGAAAGGCAGGGAAGAAGAAGCGGAAAAATCTATAGCGTTCTATAAAAGATTGAAAATCGGTTCAAAGGACATAGCATTTGAAATTGACAAAATCAGATTGCAGATTAATCCTAGTTCCGAGAAAACTTATCTACCTGTAGATACTGAAGAAGCAAAAGATTTAGCGAAACATGAAGAGCAACAAGTTGAACAGAAACCGACATCGTCTTGGAAATTTTTGATGAAGTCAAAGTCTTCACAGCGCGCCCTGGCCACAGTGCTAATAATCATGACCCTGATCATATTAATGGGCTGCGTGGTGCTACAAGTGTATGCCGAACCGCTCTTCAAAGAAGCTGTACCTTCGATGCCGCCGAACCAATGCGCCATATTACTCGCTGTGGACTTTTTAATTGCCAGTCTCGTTTGTGTATTTATTATTGATAAGTTTGGCAGAAAGCCCCTGCTAATAGTGACGGCAGCAATTTCGGGCGTCTGCATGTTCCTGCTGGGCTTGCAACTGCAGACACATTTCGCGCCACATTGGTTCACGGTGCTAATCATCTACACGTACAGCTTCGTCTACATGCTGGGCTGCGCTGCTATACCGTTCGTATTGAGCGCCGAACTTTTCTTGCCGGAGGTGAGGAGTCTCTGTAATAGCATCACAATGGTTTGCCTTTGGTCGGTCAATTTTGTGACTCTTCTGGTGTTCAAGCCGCTGGCGGAATGGCTGGGCCTCGGAATAGTGTTCTACTGCTTTTCAATGTTCAGTTTCGTGGGAGTTTTATTTGGCTACGCATACATACCGGAGACGAAAGGTTTATCAGTGGACGCGATACAGTTATTATTTTTGAAGAAAAAATAG

Protein

MERFNLIAIEDLPAGEPIEQALTERSKRSWNPRNYEPDGEDIPVILSSPAIPPSPAMYVECGGSGTSTPSSRYNIQISVHGSRSPSPSHKRVRRSLCPDQEHDTTNRDSISSLRRPLRDSEICYLLHYGSDDDDSDDESQNDNDEIVPMIIPRAAGILMDTPDDEEIEIDTAAATKPLVTSSAPSIISAPTSPARDTGMKPSHFFEFDWGTFPDSPIPPTERRESFKEHSGPTVAVSDPYEIFRLIWDQEFMEFIVQETNRYAQQLAAEMLDGGELQASSRITEWKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNLNLDPSQAKLFKVEPVISHLNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQTGYLWRFKIHAHKASPTVSEADPFTASTPALVLNLIKGLEHKGYTLWMDNFYNSPALARKLKSIGFDCVGTLRTNRKYVPTELTNLKKSQMKPGQVVGYTSGDVDCIIWRDQNRVATISTYHGNAVSTKNGVTKLILIRDYNICMGGVDKKDQMLAAFPIERKRTQIWYKKLFKRPMSAWEISLLGSLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNVILVLVAMSIAGVGVAGQNVAIIYVSEIAHDSIRGGLTAFSSSGYIIGLLTSYILGGKLTYQQVVYTHLGFSVMTMLLLTLLRESPVFLVMKGREEEAEKSIAFYKRLKIGSKDIAFEIDKIRLQINPSSEKTYLPVDTEEAKDLAKHEEQQVEQKPTSSWKFLMKSKSSQRALATVLIIMTLIILMGCVVLQVYAEPLFKEAVPSMPPNQCAILLAVDFLIASLVCVFIIDKFGRKPLLIVTAAISGVCMFLLGLQLQTHFAPHWFTVLIIYTYSFVYMLGCAAIPFVLSAELFLPEVRSLCNSITMVCLWSVNFVTLLVFKPLAEWLGLGIVFYCFSMFSFVGVLFGYAYIPETKGLSVDAIQLLFLKKK

Uniprot

NA

ProteinModelPortal

NA

PDB

4ZWC E-value=7.27122e-17, Score=217

KEGG

101738125 no KO assigned | (RefSeq) uncharacterized LOC101738125

GO

GO:0016021 GO:0022857 GO:0006810 GO:0016020 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824 GO:0055085

Length:

1028

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

237.54572

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00196

outside

1 - 605

TMhelix

606 - 628

inside

629 - 634

TMhelix

635 - 652

outside

653 - 656

TMhelix

657 - 679

inside

680 - 691

TMhelix

692 - 711

outside

712 - 720

TMhelix

721 - 738

inside

739 - 829

TMhelix

830 - 852

outside

853 - 866

TMhelix

867 - 887

inside

888 - 893

TMhelix

894 - 916

outside

917 - 925

TMhelix

926 - 948

inside

949 - 954

TMhelix

955 - 977

outside

978 - 986

TMhelix

987 - 1009

inside

1010 - 1028

Pi

205.085331

Theta

145.845751

Tajima's D

0.396557

CLR

0.532338

CSRT

0.485675716214189

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree