Gene

KWMTBOMO11834

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1_[Bombyx_mori]

Location

Bomo_Chr20(-):1492358-1504240      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.734

CDS

ATGACTACTCTGGAGATCTCGTTGGTCGGGAGTGTGGTTAACATTGGAGCATTGGTAGCCACGCCTTTCTGTACTTACTTCTTAAATAAGTTGGGGCGGAAATACACATGTATGCTCTTTGGCGTGCCTTATGCGATGTCATGGGCGATACTGTCAGTATCTAATTATGTTCCTTTTGTCATCGTCGCTTTGGCTTTGAGTGGAATTGGCGCTGCGGGTGTACCGGCCTCAACAATTTATATCTCGGAGATATCAGATGATTCAATCAGAGGAATTTTAACGTCAAATGCGATATCAGGATATTTTCTCGGACTTTTTCTCTCCTACTCCTGGGGAGGATACTTGAGCTATTACAACGTAGTCCACTTGCACTTGGGTCTATGCGTGCTGTATATTATAATGGTTGGTTCTTTGAAGGATTCCCCGGTTTTCTTGATGCAAACCAACAAAGAAAAGGAGGCGGCGAAATCGATTGCCTTTTATCGGTGTGTGGACGTCACATCTAAAGAAGTGGAGATAGAACTAGCCAATATCCGCCTGCAGCTTGATCCTCGTCGAGAGAATATTCTAGAAGGGAAAAATGATATGACAGTCACAAAAGAATTGTTAAAGATTAAATCAGAACCAGCCGAAGCGAAATCAGAATGGAAATTTTTAATCAATTCCCCGTCATCAATTCGAGCTTTGACTATCGCTATTATCACGATGACGTACACGGTGCTCATGGGAGTGGTGGTGCTCCAGGTATACGCCGAACCACTATTCAGAGAAGCAGTCCCATCGATGGAGCCGAACCAGTTGACGATTTACCTGGCGATAGATTTCATTGTGGGCAGTCTTATTTGTGGAGTACTCATTGACAGATTGGGGCGTAAGTACCTGCTGATCATCACCACAGTCCTGACCAGCATATGTATATTACTGATGGCGACTCAGCTGCAGTTCAGCTGGGCTCCACAGTGGACGACAGCGGGCTTCATGTACGCCTTCTCCTTCTTCTACAACTTGGGACCGGCGACGATTCCGTTCGTGATCGCTGCCGAGTTCTTTGTGCCAGAAGTCCGAGGTCTGTGCAATTGTTTGATCAACGCCTGTACTTGGCTCATGAATTTTGTGACGCTTCAATTATTCTCACAACTCGTCGATTGGGTCGGCCTGGCTCCTCTCTTCTACCTCTTCAGTTTCTTCGGATTCCTTGGAGCGGTCTTTTGTCAATTTTACTTGCCGGAGACTAAGGGTATGCCCATCGAAGCCATTCCGTTGCTCTTCATTAAGAAAGATAAGAGAAGACATTATAATATCTAA

Protein

MTTLEISLVGSVVNIGALVATPFCTYFLNKLGRKYTCMLFGVPYAMSWAILSVSNYVPFVIVALALSGIGAAGVPASTIYISEISDDSIRGILTSNAISGYFLGLFLSYSWGGYLSYYNVVHLHLGLCVLYIIMVGSLKDSPVFLMQTNKEKEAAKSIAFYRCVDVTSKEVEIELANIRLQLDPRRENILEGKNDMTVTKELLKIKSEPAEAKSEWKFLINSPSSIRALTIAIITMTYTVLMGVVVLQVYAEPLFREAVPSMEPNQLTIYLAIDFIVGSLICGVLIDRLGRKYLLIITTVLTSICILLMATQLQFSWAPQWTTAGFMYAFSFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQLVDWVGLAPLFYLFSFFGFLGAVFCQFYLPETKGMPIEAIPLLFIKKDKRRHYNI

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A2A4JUG4   A0A0N1PKK0   A0A0N1IQK5   A0A2W1BZ84   A0A2H1WYH9   A0A212F787   + More
A0A2W1BPY0   A0A2A4JV69   H9JWY9   A0A3S2M6I8   A0A2W1BTX0   A0A2A4JW98   A0A194Q6Z4   A0A0N0PEG4   A0A212F769   A0A194QBG3   A0A194Q5E1   A0A2H1VA59   A0A194Q5E7   H9JVU1   A0A2A4JYQ5   A0A2W1BWR1   A0A3S2LEN2   A0A0L7KPP9   A0A3S2LR68   A0A212F6E9   A0A2W1BV94   A0A0N0PED5   A0A2A4JW00   A0A0N0PF14   A0A2H1X1H2   A0A2A4K0E5   A0A2W1BTZ9   H9JWZ0   A0A0N1PIZ3   A0A2H1WVK7   A0A1B6GYS0   A0A1B6KIF4   A0A0L7L2W9   A0A2J7PYX6   A0A2J7R8L3   A0A336MWL1   A0A067R867   A0A336MDM9   A0A1S4FFK9   Q173J5   A0A0A1WNR4   A0A1B6FS48   A0A0C9Q8K4   A0A2P8Z801   A0A182TXA5   B0WPK5   A0A182JZA6   A0A182I799   A0A1B6CY32   A0A1B6DME3   B0WPK6   A0A1Q3F5A2   Q7PWP0   A0A1S4GZI9   W8BY63   A0A2M4A7E4   A0A182LMV4   A0A2M4A741   A0A2M4BLL7   A0A182XNP0   A0A2J7R8M9   A0A182UZ66   A0A182P8A2   A0A2M4BLK9   A0A2M4A739   A0A0M4EUF1   A0A2M3Z428   A0A2M3Z412   A0A2M3ZH26   A0A026WMM0   A0A084W7N7   A0A182NGP0   A0A182QRF9   A0A1L8DIV6   A0A182NAM9   A0A0A8J8K5   A0A182F539   W5JMX1   E9J4B0   A0A2M4CQC1   A0A1Q3FS38   A0A2M4CQF1   A0A182MPL4   A0A226EKQ9   A0A182UH29   A0A182R408   A0A3L8D924   A0A2P8ZLZ6   A0A0C9RQR2   A0A1B6JA16  

Pubmed

26354079    28756777    22118469    19121390    26227816    24845553    + More
17510324    25830018    29403074    12364791    24495485    20966253    24508170    30249741    24438588    20920257    23761445    21282665   

EMBL

NWSH01000558    PCG75665.1    LADJ01037929    KPJ21328.1    LADI01012895    KPJ20745.1    + More
KZ149937    PZC77103.1    ODYU01011969    SOQ58016.1    AGBW02009924    OWR49569.1    PZC77102.1    PCG75666.1    BABH01043549    RSAL01000025    RVE52104.1    PZC77105.1    PCG75662.1    KQ459460    KPJ00770.1    KQ459838    KPJ19748.1    OWR49568.1    KPJ00771.1    KPJ00767.1    ODYU01001454    SOQ37676.1    KPJ00768.1    BABH01040660    NWSH01000350    PCG77147.1    PZC77116.1    RVE52115.1    JTDY01007385    KOB65252.1    RVE52106.1    AGBW02010035    OWR49315.1    PZC77117.1    KPJ19751.1    PCG75663.1    KPJ20744.1    ODYU01012723    SOQ59169.1    PCG77150.1    PZC77104.1    BABH01041799    BABH01041800    BABH01041801    KQ460009    KPJ18482.1    ODYU01011381    SOQ57088.1    GECZ01003576    GECZ01002212    JAS66193.1    JAS67557.1    GEBQ01028740    JAT11237.1    JTDY01003373    KOB69656.1    NEVH01020342    PNF21526.1    NEVH01006721    PNF37174.1    UFQT01003140    SSX34636.1    KK852870    KDR14605.1    UFQT01000924    SSX28030.1    CH477423    EAT41201.1    GBXI01014229    JAD00063.1    GECZ01016734    JAS53035.1    GBYB01010573    JAG80340.1    PYGN01000154    PSN52620.1    DS232026    EDS32406.1    APCN01003374    GEDC01018964    JAS18334.1    GEDC01010470    JAS26828.1    EDS32407.1    GFDL01012362    JAV22683.1    AAAB01008984    EAA14882.4    GAMC01012366    JAB94189.1    GGFK01003378    MBW36699.1    GGFK01003296    MBW36617.1    GGFJ01004829    MBW53970.1    PNF37175.1    GGFJ01004828    MBW53969.1    GGFK01003278    MBW36599.1    CP012524    ALC41045.1    GGFM01002530    MBW23281.1    GGFM01002508    MBW23259.1    GGFM01007009    MBW27760.1    KK107151    QOIP01000003    EZA57322.1    RLU25205.1    ATLV01021268    KE525315    KFB46231.1    AXCN02002080    GFDF01007794    JAV06290.1    AB901068    BAQ02368.1    ADMH02001096    ETN64119.1    GL768090    EFZ12343.1    GGFL01003356    MBW67534.1    GFDL01004625    JAV30420.1    GGFL01003355    MBW67533.1    AXCM01000345    LNIX01000003    OXA58039.1    QOIP01000011    RLU16997.1    PYGN01000019    PSN57527.1    GBYB01009586    JAG79353.1    GECU01011708    JAS95998.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000005204    UP000283053    + More
UP000037510    UP000235965    UP000027135    UP000008820    UP000245037    UP000075902    UP000002320    UP000075881    UP000075840    UP000007062    UP000075882    UP000076407    UP000075903    UP000075885    UP000092553    UP000053097    UP000279307    UP000030765    UP000075884    UP000075886    UP000069272    UP000000673    UP000075883    UP000198287    UP000075900   

PRIDE

H9JWY9    H9JVU1    H9JWZ0   

Pfam

PF00083   Sugar_tr        + More
PF04114   Gaa1
PF07690   MFS_1

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
IPR007246   Gaa1       
IPR003663   Sugar/inositol_transpt       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2A4JUG4   A0A0N1PKK0   A0A0N1IQK5   A0A2W1BZ84   A0A2H1WYH9   A0A212F787   + More
A0A2W1BPY0   A0A2A4JV69   H9JWY9   A0A3S2M6I8   A0A2W1BTX0   A0A2A4JW98   A0A194Q6Z4   A0A0N0PEG4   A0A212F769   A0A194QBG3   A0A194Q5E1   A0A2H1VA59   A0A194Q5E7   H9JVU1   A0A2A4JYQ5   A0A2W1BWR1   A0A3S2LEN2   A0A0L7KPP9   A0A3S2LR68   A0A212F6E9   A0A2W1BV94   A0A0N0PED5   A0A2A4JW00   A0A0N0PF14   A0A2H1X1H2   A0A2A4K0E5   A0A2W1BTZ9   H9JWZ0   A0A0N1PIZ3   A0A2H1WVK7   A0A1B6GYS0   A0A1B6KIF4   A0A0L7L2W9   A0A2J7PYX6   A0A2J7R8L3   A0A336MWL1   A0A067R867   A0A336MDM9   A0A1S4FFK9   Q173J5   A0A0A1WNR4   A0A1B6FS48   A0A0C9Q8K4   A0A2P8Z801   A0A182TXA5   B0WPK5   A0A182JZA6   A0A182I799   A0A1B6CY32   A0A1B6DME3   B0WPK6   A0A1Q3F5A2   Q7PWP0   A0A1S4GZI9   W8BY63   A0A2M4A7E4   A0A182LMV4   A0A2M4A741   A0A2M4BLL7   A0A182XNP0   A0A2J7R8M9   A0A182UZ66   A0A182P8A2   A0A2M4BLK9   A0A2M4A739   A0A0M4EUF1   A0A2M3Z428   A0A2M3Z412   A0A2M3ZH26   A0A026WMM0   A0A084W7N7   A0A182NGP0   A0A182QRF9   A0A1L8DIV6   A0A182NAM9   A0A0A8J8K5   A0A182F539   W5JMX1   E9J4B0   A0A2M4CQC1   A0A1Q3FS38   A0A2M4CQF1   A0A182MPL4   A0A226EKQ9   A0A182UH29   A0A182R408   A0A3L8D924   A0A2P8ZLZ6   A0A0C9RQR2   A0A1B6JA16  

PDB

5EQI     E-value=8.25489e-11,     Score=162

KEGG

101736365    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021   GO:0022857   GO:0008643   GO:0042765   GO:0005215   GO:0055085   GO:0005351   GO:0005887   GO:0006810   GO:0016020   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR13304  

Length:

434

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

230.29567

Exp number, first 60 AAs:

39.60536

Total prob of N-in:

0.36577

POSSIBLE N-term signal

sequence

outside

1  -  5

TMhelix

6  -  28

inside

29  -  34

TMhelix

35  -  54

outside

55  -  58

TMhelix

59  -  81

inside

82  -  92

TMhelix

93  -  115

outside

116  -  119

TMhelix

120  -  138

inside

139  -  228

TMhelix

229  -  251

outside

252  -  265

TMhelix

266  -  286

inside

287  -  292

TMhelix

293  -  315

outside

316  -  324

TMhelix

325  -  347

inside

348  -  353

TMhelix

354  -  376

outside

377  -  385

TMhelix

386  -  408

inside

409  -  434

 

 

Pi

187.359827

Theta

158.360149

Tajima's D

0.163904

CLR

0.123412

CSRT

0.413829308534573

Interpretation

Uncertain