Silkworm Genome Informatics Database

Gene

KWMTBOMO11833

Pre Gene Modal

BGIBMGA014055

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]

Location

Bomo_Chr20(-):1463202-1485740 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.871

CDS

ATGAAAGGAAAATTGAATCAGGTGTTCACTTCTTTTGCGTGTGGCTACGGTTCACTTTTGATGGGCTTCACCAACGTCTGGCCTTCGTACACGACGGAGCTCTTCAAGTCCGAGCTGACCCCGCTGTCGGCGCCATTCAGTGAAACTCACGCGTCTCTCCTGGGCAGTCTACCGTCGTTGGGAGCGATGCTCGGAACAGCCATAACCGGAACGCTGATCAACAGTCTGGGCAGAAAAAATGGTGGAATCGTTTTAACTCTGTTCAATGTTTTATCATGGACCATAGTGGAACTAAGTTCATCACCGATACTGATCCTGGTTGCGAGGTTCCTAGCCGGAATCTCCGGTGGGGGTTTGCTGGTGATGGCCCCAATATTTATATCGGAGATCGCGGACGATTCCATCAGAGGGGCTTTGGCTTCAAGTCCTTTATTTCTCTACTGCGTGGGAGTCTTACTATCCTACATCATAGGCTGGTTCTCTACCTACCATGTTATAATATGGATAAGCTTAGCTTTGAGCGTGACCGGAGTTTTTCTCTTTTTGTTGAGTACAGAGAGTCCTATTTACTACATGAGAAAACAAAGGGAAGAGGACGCCCGCGCATCTATCGCACGCTACAAAGGTCTGTCGCCAGCTTCCATGGGAGTCATTGATGAGCTGATAAGGATAAAGCAACAAGTTGTGCCAGCTATTGAACTCGTTTCTGTTACCGCAGAGCCCGACAGCAAAGCAGAAGAGGCTGAAAAGGAGAAACTTAACAATGATGATGACGTACATGAACCAACCCAAAACGTATCTACTATCAAACAGTTGTTTACGACGCCATCGTCACTGCGGGGCTTTTTCACCGTTTTAACTGTGATCTCGATGCAGGTTTTCATGGGCATAGTTCCAGTACAAGTATATGCTAAGGAGGTCTTCAGACAGACAGACCCTGCCAAATCTGATTTATACACAGTGCTGTTCGCTCTGACGCTTTGCAGCGGAACACTTGTCACTGCTACTGTTGCTGACAAAGCTGGTAGAAGGGTGTTGATAATAGCGTCTTCAGCGCTTGTGTCCCTCTGCATGGCCTCGCTGGGATATCTTCTGCAGAGTAAAAGTGCGCCATCTTGGGTCACCATTCTGGTAATCTTAATTTACTGCTTCGCCTTCATGTTCGGAGCTGGTAGCGTGCCTTATGTCCTGCTGGCAGAGGTGTTTGTGCCCGAGGTTCAAAACTTTGCATCAATGCTGATAATTGAATGGGTCTGGTTCCTCAATTTTTTCATCTTGATCATATTCAGCTACATGACCACATTAGTTGGGATCCACGGCGTGTTCTACTGCTTCGCGGCAGTGGCTCTGTGTAATATGGCCGTGTTCGCCTCTTTTGCGAGTGGCTACGGTTCATTTTTGATGGGCTTCACCAACGTCTGGCCTTCGTACACGACGGAGCTCTTCAAGTCCGAGCTGACCCCGCTGTCGGCGCCATTCAGTGAAACTCACGCGTCTCTCCTGGGCAGTCTACCGTCGTTGGGAGCGATGCTCGGAACAGCCATAACCGGAACGCTGATCAACAGTCTGGGCAGAAAAAATGGTGGAATCGTTTTAACTCTATTCAATGTTGTATTTATCATGGATCATAGTGGAGCTATGTTCCTCACCGATGCTGATCCTGGTTGCGAGGACGCCCGCGCATCTATCGCACACTACAAAGGTCTATCGCCAACTTCCACGGAAGTCATGGATGAGCTGACAAGGATAAAGCAACAAATCGTGCCAGCTATTGAACTAGTTTCTGTTACCGCAGAGCCCGACAGCAAAGCAGAAGAGGCTGAAAAGGAGAAACTTAACAATGATGATGATGTACATGAACTAGCCAAAAACGTATCTACTATCAAACAGTTGTTTACGACGCCATCGTCACTGCGGGGCTTCCTCATCGTTTTAACTGTGATATCGATGCAGGTTTTCATGGGCATGGTTCCAGTCCAAGTGTATGCTAAGGAGGTCTTCAGACAGACAGACCCTGCCAAGTCTGATTTATACACAGTGCTGTTCGCTCTGACGCTCTGCAGCGGGACACTTGTCACTGCCACTGTAGCTGACAAAGCTGGTAGAAGGGTGTTATTAATAGCGTCTTCAGCGCTTGTGTCCCTCTGCATGGCCTCGCTGGGATATCTTCTGCAGAGTAAAAGTGCGTCATCTTGGGTCACCATCCTGGTAATCTTAATTTACTGCTTCGCCTTCATGTTCGGAGCTGGTACAGTGCCTTATGTCCTGCTGGCAGAGGTGTTTGTGCCGGAGGTGAGGATTTTGAAATTCTTAGAACCTACACATAAGTAG

Protein

MKGKLNQVFTSFACGYGSLLMGFTNVWPSYTTELFKSELTPLSAPFSETHASLLGSLPSLGAMLGTAITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISEIADDSIRGALASSPLFLYCVGVLLSYIIGWFSTYHVIIWISLALSVTGVFLFLLSTESPIYYMRKQREEDARASIARYKGLSPASMGVIDELIRIKQQVVPAIELVSVTAEPDSKAEEAEKEKLNNDDDVHEPTQNVSTIKQLFTTPSSLRGFFTVLTVISMQVFMGIVPVQVYAKEVFRQTDPAKSDLYTVLFALTLCSGTLVTATVADKAGRRVLIIASSALVSLCMASLGYLLQSKSAPSWVTILVILIYCFAFMFGAGSVPYVLLAEVFVPEVQNFASMLIIEWVWFLNFFILIIFSYMTTLVGIHGVFYCFAAVALCNMAVFASFASGYGSFLMGFTNVWPSYTTELFKSELTPLSAPFSETHASLLGSLPSLGAMLGTAITGTLINSLGRKNGGIVLTLFNVVFIMDHSGAMFLTDADPGCEDARASIAHYKGLSPTSTEVMDELTRIKQQIVPAIELVSVTAEPDSKAEEAEKEKLNNDDDVHELAKNVSTIKQLFTTPSSLRGFLIVLTVISMQVFMGMVPVQVYAKEVFRQTDPAKSDLYTVLFALTLCSGTLVTATVADKAGRRVLLIASSALVSLCMASLGYLLQSKSASSWVTILVILIYCFAFMFGAGTVPYVLLAEVFVPEVRILKFLEPTHK

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A182P8W7 A0A0L7L2W9

Pubmed

26227816

EMBL

JTDY01003373 KOB69656.1

Proteomes

UP000075885 UP000037510

Pfam

PF00083 Sugar_tr

Interpro

IPR003663   Sugar/inositol_transpt        + More
IPR005828   MFS_sugar_transport-like
IPR036259   MFS_trans_sf
IPR005829   Sugar_transporter_CS
IPR020846   MFS_dom

SUPFAM

SSF103473 SSF103473

CDD

cd06174 MFS

ProteinModelPortal

A0A182P8W7 A0A0L7L2W9

PDB

4YBQ E-value=1.55833e-14, Score=196

KEGG

101736483 K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021 GO:0022857 GO:0008643 GO:0005215 GO:0006810 GO:0016020 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824 GO:0055085

Length:

776

Number of predicted TMHs:

16

Exp number of AAs in TMHs:

367.61563

Exp number, first 60 AAs:

29.19498

Total prob of N-in:

0.98494

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 27

outside

28 - 53

TMhelix

54 - 76

inside

77 - 82

TMhelix

83 - 105

outside

106 - 108

TMhelix

109 - 131

inside

132 - 137

TMhelix

138 - 160

outside

161 - 164

TMhelix

165 - 184

inside

185 - 280

TMhelix

281 - 303

outside

304 - 317

TMhelix

318 - 337

inside

338 - 343

TMhelix

344 - 366

outside

367 - 375

TMhelix

376 - 398

inside

399 - 418

TMhelix

419 - 441

outside

442 - 444

TMhelix

445 - 467

inside

468 - 639

TMhelix

640 - 662

outside

663 - 676

TMhelix

677 - 696

inside

697 - 702

TMhelix

703 - 725

outside

726 - 734

TMhelix

735 - 757

inside

758 - 776

Pi

202.178796

Theta

191.8431

Tajima's D

-2.127926

CLR

108.883264

CSRT

0.00769961501924904

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics